Apalutamide_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Apalutamide perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Apalutamide_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.129867
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.100609
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0764506
NAMPT nicotinamide phosphoribosyltransferase 0.0714058
HMGA2 high mobility group AT-hook 2 0.0674896
AHR aryl hydrocarbon receptor 0.0637174
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0615626
ITGA1 integrin, alpha 1 0.0550002
FNDC3B fibronectin type III domain containing 3B 0.0528858
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0490424
FTH1 ferritin, heavy polypeptide 1 0.0452466
CENPF centromere protein F, 350/400kDa 0.0428621
GLIS3 GLIS family zinc finger 3 0.0394045
NRIP1 nuclear receptor interacting protein 1 0.0388917
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0387041
NRP1 neuropilin 1 0.0376594
DST dystonin 0.0374877
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.033538
RICTOR RPTOR independent companion of MTOR, complex 2 0.0329933
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0320976
RUNX2 runt-related transcription factor 2 0.0320236
APLP2 amyloid beta (A4) precursor-like protein 2 0.0319982
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.031767
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0315911
OSMR oncostatin M receptor 0.0314406
VEGFC vascular endothelial growth factor C 0.0309867
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0304302
MCTP2 multiple C2 domains, transmembrane 2 0.0301209
PELO pelota homolog (Drosophila) 0.0299604
EREG epiregulin 0.0290747
PRELID2 PRELI domain containing 2 0.0283348
ETV6 ets variant 6 0.0276852
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0270292
MBD5 methyl-CpG binding domain protein 5 0.0268942
HIPK2 homeodomain interacting protein kinase 2 0.0253551
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0252362
FAT1 FAT atypical cadherin 1 0.0250382
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0250033
MKI67 marker of proliferation Ki-67 0.0246844
RTN4 reticulon 4 0.0234071
SHB Src homology 2 domain containing adaptor protein B 0.0233358
TPM3 tropomyosin 3 0.0232358
MYH9 myosin, heavy chain 9, non-muscle 0.023128
MAP1B microtubule-associated protein 1B 0.0229954
DOCK5 dedicator of cytokinesis 5 0.0229547
MACF1 microtubule-actin crosslinking factor 1 0.0229132
SYT1 synaptotagmin I 0.022542
UBA6 ubiquitin-like modifier activating enzyme 6 0.0225346
VEGFA vascular endothelial growth factor A 0.0217754
SLTM SAFB-like, transcription modulator 0.0215304
KTN1 kinectin 1 (kinesin receptor) 0.0213148
CLTC clathrin, heavy chain (Hc) 0.0212484
GPC6 glypican 6 0.021156
TXNIP thioredoxin interacting protein 0.0209668
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0206898
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 0.0205673
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0205624
PCBP2 poly(rC) binding protein 2 0.0205263
FRYL FRY-like 0.0204078
SMOX spermine oxidase 0.020117
MAML2 mastermind-like 2 (Drosophila) 0.0199707
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0198355
EFNA5 ephrin-A5 0.0196432
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0196206
SMYD3 SET and MYND domain containing 3 0.0196047
OXR1 oxidation resistance 1 0.0195937
TXNRD1 thioredoxin reductase 1 0.0194506
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0193671
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0193096
ZC3H11A zinc finger CCCH-type containing 11A 0.0189195
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0185637
TPR translocated promoter region, nuclear basket protein 0.0184948
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0184155
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0181343
UBXN4 UBX domain protein 4 0.0179982
RBM39 RNA binding motif protein 39 0.017958
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0177444
NPC1 Niemann-Pick disease, type C1 0.0175584
SYNJ2 synaptojanin 2 0.0175526
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0173485
TENT5A terminal nucleotidyltransferase 5A 0.0173321
WWTR1 WW domain containing transcription regulator 1 0.0173005
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0172957
SPRED1 sprouty-related, EVH1 domain containing 1 0.0171387
MAP3K9 mitogen-activated protein kinase kinase kinase 9 0.017025
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.0168294
PTBP3 polypyrimidine tract binding protein 3 0.016702
RASAL2 RAS protein activator like 2 0.0166683
FAM13A family with sequence similarity 13, member A 0.0166378
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0165447
BCLAF1 BCL2-associated transcription factor 1 0.0163842
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0163837
ETNK1 ethanolamine kinase 1 0.0163578
NOTCH2 notch 2 0.0162218
ZEB2 zinc finger E-box binding homeobox 2 0.0161623
IL6ST interleukin 6 signal transducer 0.0157768
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0157522
PCM1 pericentriolar material 1 0.0157106
SON SON DNA binding protein 0.015693
CDC73 cell division cycle 73 0.0156682

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.205742
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.182037
TPT1 tumor protein, translationally-controlled 1 -0.12631
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.1219
HLA-B major histocompatibility complex, class I, B -0.116886
FTL ferritin, light polypeptide -0.113323
TMSB10 thymosin beta 10 -0.110877
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0990001
RPL35A ribosomal protein L35a -0.0739075
ACTG1 actin gamma 1 -0.0727171
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0633978
IER3 immediate early response 3 -0.0628512
IFI27 interferon, alpha-inducible protein 27 -0.0615376
RPL31 ribosomal protein L31 -0.0613463
RPLP1 ribosomal protein, large, P1 -0.0586516
RPS24 ribosomal protein S24 -0.05769
SQSTM1 sequestosome 1 -0.052293
LOC102724023 ES1 protein homolog, mitochondrial -0.0496477
RPL37A ribosomal protein L37a -0.0477306
RPS6 ribosomal protein S6 -0.0463264
TMSB4X thymosin beta 4, X-linked -0.0463098
RPS25 ribosomal protein S25 -0.0459835
S100A6 S100 calcium binding protein A6 -0.0452457
INTS6 integrator complex subunit 6 -0.0433799
NDRG1 N-myc downstream regulated 1 -0.0431458
VIM vimentin -0.0425695
S100A10 S100 calcium binding protein A10 -0.0423194
RPS8 ribosomal protein S8 -0.0421432
SOX4 SRY (sex determining region Y)-box 4 -0.0411191
RPL38 ribosomal protein L38 -0.0400963
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0397237
RPL34 ribosomal protein L34 -0.0391325
RPL37 ribosomal protein L37 -0.038998
RPS29 ribosomal protein S29 -0.0381524
RPL9 ribosomal protein L9 -0.0376919
RPS11 ribosomal protein S11 -0.0374477
RPS27A ribosomal protein S27a -0.0362771
RPS21 ribosomal protein S21 -0.0354267
RPS23 ribosomal protein S23 -0.0342753
RPL19 ribosomal protein L19 -0.0327683
RPS19 ribosomal protein S19 -0.0323899
RPL23 ribosomal protein L23 -0.031755
MT2A metallothionein 2A -0.0314292
EGR1 early growth response 1 -0.0312369
RPL26 ribosomal protein L26 -0.031036
S100A9 S100 calcium binding protein A9 -0.0302661
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0292778
GNAS GNAS complex locus -0.0288607
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0288311
RPLP2 ribosomal protein, large, P2 -0.0286194
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0281991
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0281465
RPS16 ribosomal protein S16 -0.0276351
CD63 CD63 molecule -0.0275818
ENO2 enolase 2 (gamma, neuronal) -0.0274385
MTDH metadherin -0.0273689
EIF1 eukaryotic translation initiation factor 1 -0.0273435
TM4SF1 transmembrane 4 L six family member 1 -0.026776
HLA-A major histocompatibility complex, class I, A -0.0266871
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0265148
RPS13 ribosomal protein S13 -0.0264951
RPL36A ribosomal protein L36a -0.0262266
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A -0.0262164
LRRC23 leucine rich repeat containing 23 -0.0261129
WSB1 WD repeat and SOCS box containing 1 -0.0257898
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0255997
UBC ubiquitin C -0.0252682
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0251422
RPS27 ribosomal protein S27 -0.0250655
RPS3 ribosomal protein S3 -0.0250116
SLC38A2 solute carrier family 38, member 2 -0.0249644
IFI6 interferon, alpha-inducible protein 6 -0.0243939
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.02411
PDE4D phosphodiesterase 4D, cAMP-specific -0.0240833
SLC38A1 solute carrier family 38, member 1 -0.0240239
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.023712
RPL28 ribosomal protein L28 -0.0236298
TBCA tubulin folding cofactor A -0.0236218
EIF5B eukaryotic translation initiation factor 5B -0.0234436
PGK1 phosphoglycerate kinase 1 -0.0233154
RPS20 ribosomal protein S20 -0.0229488
CUX1 cut-like homeobox 1 -0.0228064
RPL11 ribosomal protein L11 -0.0227367
PKM pyruvate kinase, muscle -0.0223581
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) -0.0223254
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0222761
RPL12 ribosomal protein L12 -0.022229
RPS14 ribosomal protein S14 -0.0218802
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0218314
FBXO11 F-box protein 11 -0.0215978
RPLP0 ribosomal protein, large, P0 -0.0214184
B2M beta-2-microglobulin -0.0210774
MCL1 myeloid cell leukemia 1 -0.0206583
UGDH UDP-glucose 6-dehydrogenase -0.0205446
RPS5 ribosomal protein S5 -0.0204635
RAB7A RAB7A, member RAS oncogene family -0.0204365
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0204075
AHNAK AHNAK nucleoprotein -0.0202091
RPL8 ribosomal protein L8 -0.0201357
RPS12 ribosomal protein S12 -0.0199826