Arbutin_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Arbutin perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Arbutin_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SOD2 superoxide dismutase 2, mitochondrial 0.307111
MYH9 myosin, heavy chain 9, non-muscle 0.275442
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.156856
COL6A3 collagen, type VI, alpha 3 0.156618
FRMD4A FERM domain containing 4A 0.148902
FN1 fibronectin 1 0.115775
LDHA lactate dehydrogenase A 0.0884237
NAV2 neuron navigator 2 0.0768091
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0712899
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0666869
EEF2 eukaryotic translation elongation factor 2 0.0637194
SMAD3 SMAD family member 3 0.060626
TRIO trio Rho guanine nucleotide exchange factor 0.0593161
FLNA filamin A, alpha 0.0570384
RPL3 ribosomal protein L3 0.0569348
THBS1 thrombospondin 1 0.055965
TNIP1 TNFAIP3 interacting protein 1 0.0533457
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0521724
AHNAK AHNAK nucleoprotein 0.0516122
C3 complement component 3 0.0511292
PARP14 poly (ADP-ribose) polymerase family, member 14 0.049549
ICAM1 intercellular adhesion molecule 1 0.0490345
MSN moesin 0.048894
APP amyloid beta (A4) precursor protein 0.0486003
CEP250 centrosomal protein 250kDa 0.0460336
TUBB tubulin, beta class I 0.0439605
FLNB filamin B, beta 0.0430306
MLPH melanophilin 0.0415017
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0406038
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0397083
APLP2 amyloid beta (A4) precursor-like protein 2 0.0385506
TNS3 tensin 3 0.0378049
MYOF myoferlin 0.0377055
MACF1 microtubule-actin crosslinking factor 1 0.0362393
OGA O-GlcNAcase 0.0362075
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0355356
FAM20C family with sequence similarity 20, member C 0.0350786
ZMIZ1 zinc finger, MIZ-type containing 1 0.0350569
ANLN anillin, actin binding protein 0.0339352
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0338711
OPTN optineurin 0.0328884
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0314122
TPM4 tropomyosin 4 0.0312013
MKI67 marker of proliferation Ki-67 0.0307712
ACTN1 actinin, alpha 1 0.0306872
USP9X ubiquitin specific peptidase 9, X-linked 0.0301713
CSDE1 cold shock domain containing E1, RNA-binding 0.0297581
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0291744
RIGI RNA sensor RIG-I 0.0290758
RNF213 ring finger protein 213 0.0290449
DST dystonin 0.028825
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0286876
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0285998
UTRN utrophin 0.0285987
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.028275
PLEC plectin 0.0282046
SFTPA2 surfactant protein A2 0.0274991
IGF2R insulin-like growth factor 2 receptor 0.0274887
MCL1 myeloid cell leukemia 1 0.0270593
CD59 CD59 molecule, complement regulatory protein 0.0265136
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0262509
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0260401
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.025779
CENPF centromere protein F, 350/400kDa 0.0255147
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0252478
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0250752
COL1A2 collagen, type I, alpha 2 0.0250449
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0249982
ADAR adenosine deaminase, RNA-specific 0.0246182
TCP1 t-complex 1 0.0245276
NAV1 neuron navigator 1 0.0244551
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0243541
RPS4X ribosomal protein S4, X-linked 0.0243474
ELL2 elongation factor, RNA polymerase II, 2 0.0242682
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0240792
CDK17 cyclin-dependent kinase 17 0.0240345
GSK3B glycogen synthase kinase 3 beta 0.0240078
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0237314
CUL4B cullin 4B 0.0235187
SERINC1 serine incorporator 1 0.0234485
LOXL2 lysyl oxidase-like 2 0.0234068
CXCL8 chemokine (C-X-C motif) ligand 8 0.0232331
FNIP1 folliculin interacting protein 1 0.0229999
CTSB cathepsin B 0.0226391
KDM3A lysine (K)-specific demethylase 3A 0.0224238
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0222808
WDR1 WD repeat domain 1 0.0222339
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0222336
HSPA8 heat shock 70kDa protein 8 0.0219418
IQGAP1 IQ motif containing GTPase activating protein 1 0.0218817
BIRC3 baculoviral IAP repeat containing 3 0.0218618
VEGFA vascular endothelial growth factor A 0.0218265
PRRC2B proline-rich coiled-coil 2B 0.021427
FNDC3B fibronectin type III domain containing 3B 0.021252
CKAP5 cytoskeleton associated protein 5 0.021124
ERRFI1 ERBB receptor feedback inhibitor 1 0.0210612
TRIM22 tripartite motif containing 22 0.0210041
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0208075
KLF12 Kruppel-like factor 12 0.020792
SDC4 syndecan 4 0.0207846

decreased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.114887
VIM vimentin -0.114743
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.100601
NDRG1 N-myc downstream regulated 1 -0.0699857
RPS6 ribosomal protein S6 -0.0674622
EGR1 early growth response 1 -0.0568376
TMSB10 thymosin beta 10 -0.0532061
PTMA prothymosin, alpha -0.0527029
FTL ferritin, light polypeptide -0.0440783
HLA-B major histocompatibility complex, class I, B -0.0426704
RPS8 ribosomal protein S8 -0.0426114
MT2A metallothionein 2A -0.0412526
RPL37A ribosomal protein L37a -0.0410666
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0395666
UGCG UDP-glucose ceramide glucosyltransferase -0.0386512
ACTG1 actin gamma 1 -0.0348475
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0326627
RPS3 ribosomal protein S3 -0.0325455
ZNF292 zinc finger protein 292 -0.0325299
IGFBP3 insulin-like growth factor binding protein 3 -0.0324824
HMGA1 high mobility group AT-hook 1 -0.03224
RPS12 ribosomal protein S12 -0.0310907
RPL9 ribosomal protein L9 -0.0301073
GNAS GNAS complex locus -0.0298662
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0297744
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0287829
B2M beta-2-microglobulin -0.0287662
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.028718
RPL12 ribosomal protein L12 -0.0279543
TAPBP TAP binding protein (tapasin) -0.0278734
RPL26 ribosomal protein L26 -0.0265405
RPLP1 ribosomal protein, large, P1 -0.0255538
PRRC2C proline-rich coiled-coil 2C -0.0252815
RPS19 ribosomal protein S19 -0.0251061
AKAP12 A kinase (PRKA) anchor protein 12 -0.0247598
RPL35A ribosomal protein L35a -0.0245797
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0244792
EEF1G eukaryotic translation elongation factor 1 gamma -0.0242125
N4BP2L2 NEDD4 binding protein 2-like 2 -0.02378
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0237504
SEPTIN7 septin 7 -0.0237372
IER3 immediate early response 3 -0.0235738
RACK1 receptor for activated C kinase 1 -0.0233114
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.022669
RPL23 ribosomal protein L23 -0.022486
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0222033
RPS24 ribosomal protein S24 -0.0221957
ANKRD28 ankyrin repeat domain 28 -0.0220063
RPL19 ribosomal protein L19 -0.0219854
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0219099
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0218961
GPC6 glypican 6 -0.0218201
SDK1 sidekick cell adhesion molecule 1 -0.0216487
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0213912
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0213844
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0208219
CTSD cathepsin D -0.0207655
CIRSR corepressor of RBPJ and splicing regulator -0.0205871
GPBP1 GC-rich promoter binding protein 1 -0.0205711
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0204777
KDM4C lysine (K)-specific demethylase 4C -0.0203852
NAP1L1 nucleosome assembly protein 1-like 1 -0.02026
RPS27A ribosomal protein S27a -0.0201105
RPL36A ribosomal protein L36a -0.0195543
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0194385
RPL5 ribosomal protein L5 -0.0194365
AKAP9 A kinase (PRKA) anchor protein 9 -0.0192545
GOLGA4 golgin A4 -0.0189497
WSB1 WD repeat and SOCS box containing 1 -0.0189026
TTC3 tetratricopeptide repeat domain 3 -0.0188925
ZMYND8 zinc finger, MYND-type containing 8 -0.0188678
ATF4 activating transcription factor 4 -0.0186234
COL1A1 collagen, type I, alpha 1 -0.0185809
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0185309
RPL36 ribosomal protein L36 -0.018497
RPL32 ribosomal protein L32 -0.0179831
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.0178608
PPIG peptidylprolyl isomerase G (cyclophilin G) -0.0177541
S100A9 S100 calcium binding protein A9 -0.0176629
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.017627
FAM162A family with sequence similarity 162, member A -0.0175303
KMT2E lysine (K)-specific methyltransferase 2E -0.0174965
SMAP1 small ArfGAP 1 -0.0173693
NF1 neurofibromin 1 -0.0171784
JMJD1C jumonji domain containing 1C -0.0170682
MED13 mediator complex subunit 13 -0.0170457
RPS29 ribosomal protein S29 -0.0168428
MATR3 matrin 3 -0.0168231
RNF24 ring finger protein 24 -0.0167196
RPLP0 ribosomal protein, large, P0 -0.0165753
MBD5 methyl-CpG binding domain protein 5 -0.016549
KDM5B lysine (K)-specific demethylase 5B -0.0164909
STC1 stanniocalcin 1 -0.0163956
PIAS1 protein inhibitor of activated STAT, 1 -0.0163587
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B -0.0162742
ZMYM4 zinc finger, MYM-type 4 -0.0161833
LOC102724023 ES1 protein homolog, mitochondrial -0.0160948
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0160853
ZBTB20 zinc finger and BTB domain containing 20 -0.0160812
RPS14 ribosomal protein S14 -0.0160468