Arbutin_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Arbutin perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Arbutin_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 0.220987
NAMPT nicotinamide phosphoribosyltransferase 0.113481
B2M beta-2-microglobulin 0.106161
LDHA lactate dehydrogenase A 0.0765533
MYH9 myosin, heavy chain 9, non-muscle 0.0757661
HLA-B major histocompatibility complex, class I, B 0.0714713
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0686411
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0677476
FAM13A family with sequence similarity 13, member A 0.0648116
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0645908
SOD2 superoxide dismutase 2, mitochondrial 0.0634644
SDC4 syndecan 4 0.0602642
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0600438
CANX calnexin 0.0581058
ARRDC3 arrestin domain containing 3 0.0579698
HLA-A major histocompatibility complex, class I, A 0.0562001
HOOK2 hook microtubule-tethering protein 2 0.0560908
WTAP Wilms tumor 1 associated protein 0.0525579
WAC WW domain containing adaptor with coiled-coil 0.0510393
TNIP1 TNFAIP3 interacting protein 1 0.0510112
ATP13A3 ATPase type 13A3 0.0498615
DSCAM Down syndrome cell adhesion molecule 0.0474558
FTL ferritin, light polypeptide 0.0454487
CD109 CD109 molecule 0.0446882
UBC ubiquitin C 0.0438794
XBP1 X-box binding protein 1 0.0415043
KMT2E lysine (K)-specific methyltransferase 2E 0.0400318
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0394044
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0387367
HELZ helicase with zinc finger 0.0386501
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0371645
ANXA1 annexin A1 0.0368972
INSIG2 insulin induced gene 2 0.0362681
YTHDC1 YTH domain containing 1 0.0361358
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0354179
NDRG1 N-myc downstream regulated 1 0.035356
PDIA4 protein disulfide isomerase family A, member 4 0.03532
ITCH itchy E3 ubiquitin protein ligase 0.0353061
RSAD2 radical S-adenosyl methionine domain containing 2 0.0352311
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 0.0349483
FNDC3B fibronectin type III domain containing 3B 0.0346722
IL6 interleukin 6 0.0340821
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.034072
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0338835
IRF1 interferon regulatory factor 1 0.0338408
SPAG9 sperm associated antigen 9 0.0334518
DDIT4 DNA-damage-inducible transcript 4 0.0334428
SSBP2 single-stranded DNA binding protein 2 0.0331053
BHLHE40 basic helix-loop-helix family, member e40 0.032828
QKI QKI, KH domain containing, RNA binding 0.0326603
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0320646
GOLGA4 golgin A4 0.0320024
YEATS2 YEATS domain containing 2 0.03174
TXNIP thioredoxin interacting protein 0.0313008
PELI1 pellino E3 ubiquitin protein ligase 1 0.0307215
ZNF292 zinc finger protein 292 0.0306608
MATR3 matrin 3 0.0302149
SFTPA2 surfactant protein A2 0.0301989
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0292289
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0290995
AFF4 AF4/FMR2 family, member 4 0.0282384
FNDC3A fibronectin type III domain containing 3A 0.0281196
APLP2 amyloid beta (A4) precursor-like protein 2 0.0277526
AKAP9 A kinase (PRKA) anchor protein 9 0.0277186
PCBP2 poly(rC) binding protein 2 0.0276391
CSDE1 cold shock domain containing E1, RNA-binding 0.0274114
PDIA6 protein disulfide isomerase family A, member 6 0.0274076
XPO1 exportin 1 0.0267706
CYLD cylindromatosis (turban tumor syndrome) 0.0262019
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0259067
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0256557
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0256503
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0253058
TRA2A transformer 2 alpha homolog (Drosophila) 0.0252726
EIF1 eukaryotic translation initiation factor 1 0.0250195
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0247752
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0247635
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0247183
TPM4 tropomyosin 4 0.0241954
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0240928
PUM2 pumilio RNA-binding family member 2 0.0240205
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0239018
RTN4 reticulon 4 0.0238749
TSC22D2 TSC22 domain family, member 2 0.023731
USP3 ubiquitin specific peptidase 3 0.0236649
BACE2 beta-site APP-cleaving enzyme 2 0.0234431
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0234089
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0234014
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0233785
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0233718
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0233621
RICTOR RPTOR independent companion of MTOR, complex 2 0.0231004
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.02305
FOXN2 forkhead box N2 0.0230474
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0230207
ITM2B integral membrane protein 2B 0.0227183
RPS3 ribosomal protein S3 0.022472
KDM1A lysine (K)-specific demethylase 1A 0.0224405
WASF2 WAS protein family, member 2 0.0223984
MTMR4 myotubularin related protein 4 0.022389

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.248524
FN1 fibronectin 1 -0.0973235
CDH13 cadherin 13 -0.09568
LOX lysyl oxidase -0.0902496
HMGA2 high mobility group AT-hook 2 -0.0700326
NRXN3 neurexin 3 -0.0660207
F3 coagulation factor III (thromboplastin, tissue factor) -0.0650499
EGFR epidermal growth factor receptor -0.0640606
PSD3 pleckstrin and Sec7 domain containing 3 -0.0629577
CALD1 caldesmon 1 -0.0618961
GLIS3 GLIS family zinc finger 3 -0.0589233
EXT1 exostosin glycosyltransferase 1 -0.0560913
TMSB10 thymosin beta 10 -0.0546727
CDK6 cyclin-dependent kinase 6 -0.0535862
VCL vinculin -0.0514215
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0499522
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0477525
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0468193
HIPK2 homeodomain interacting protein kinase 2 -0.0457982
STC1 stanniocalcin 1 -0.0452411
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0420491
COL1A1 collagen, type I, alpha 1 -0.0410797
AKAP12 A kinase (PRKA) anchor protein 12 -0.0403367
FRMD4A FERM domain containing 4A -0.0400701
MYOF myoferlin -0.0400372
CD44 CD44 molecule (Indian blood group) -0.039915
TNS3 tensin 3 -0.0397356
MBD5 methyl-CpG binding domain protein 5 -0.0386847
PRKCA protein kinase C, alpha -0.0385575
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0384393
RAD51B RAD51 paralog B -0.0374371
NABP1 nucleic acid binding protein 1 -0.0367946
DST dystonin -0.0367326
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0356713
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0340581
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0339516
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.033875
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0336977
PDLIM5 PDZ and LIM domain 5 -0.0335103
TAS2R14 taste receptor, type 2, member 14 -0.0323254
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0322451
CHD9 chromodomain helicase DNA binding protein 9 -0.0322085
COL1A2 collagen, type I, alpha 2 -0.0312845
EXOC4 exocyst complex component 4 -0.0298781
VEGFC vascular endothelial growth factor C -0.029351
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0287806
ACTG1 actin gamma 1 -0.0284274
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0281829
RUNX1 runt-related transcription factor 1 -0.0280519
HDAC9 histone deacetylase 9 -0.0278661
SEC31A SEC31 homolog A (S. cerevisiae) -0.027787
COL7A1 collagen, type VII, alpha 1 -0.0277393
JPH2 junctophilin 2 -0.0274396
FBXL7 F-box and leucine-rich repeat protein 7 -0.026824
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.0267145
MYO1E myosin IE -0.0263739
CLASP1 cytoplasmic linker associated protein 1 -0.0262823
RAB31 RAB31, member RAS oncogene family -0.0261112
POTEF POTE ankyrin domain family, member F -0.0261108
BPTF bromodomain PHD finger transcription factor -0.0259811
MAP4 microtubule-associated protein 4 -0.0259394
EGR1 early growth response 1 -0.0255343
TPST1 tyrosylprotein sulfotransferase 1 -0.0253932
VIM vimentin -0.0252718
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0252718
USP9X ubiquitin specific peptidase 9, X-linked -0.0252131
KMT2C lysine (K)-specific methyltransferase 2C -0.0249611
FER fer (fps/fes related) tyrosine kinase -0.0246783
COL6A2 collagen, type VI, alpha 2 -0.0246469
INTS6 integrator complex subunit 6 -0.0245066
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0244777
ITGAV integrin, alpha V -0.0244572
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0242419
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0241194
OSBPL8 oxysterol binding protein-like 8 -0.0240822
AFF3 AF4/FMR2 family, member 3 -0.0240795
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0236442
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0234559
RCOR1 REST corepressor 1 -0.0232375
HM13 histocompatibility (minor) 13 -0.0231987
RBPMS RNA binding protein with multiple splicing -0.0231863
SETX senataxin -0.023166
PRELID2 PRELI domain containing 2 -0.0231271
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) -0.0228899
ABLIM3 actin binding LIM protein family, member 3 -0.022536
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0224321
MT2A metallothionein 2A -0.0222706
ALCAM activated leukocyte cell adhesion molecule -0.0221997
TENM3 teneurin transmembrane protein 3 -0.0221541
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0220827
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0216166
MPRIP myosin phosphatase Rho interacting protein -0.0215938
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0215192
DMTF1 cyclin D binding myb-like transcription factor 1 -0.0212947
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0212323
STARD13 StAR-related lipid transfer (START) domain containing 13 -0.0212302
CLIC4 chloride intracellular channel 4 -0.0209346
SYNPO synaptopodin -0.0207919
MYSM1 Myb-like, SWIRM and MPN domains 1 -0.0207881
ASPH aspartate beta-hydroxylase -0.020758