Artesunate_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Artesunate perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Artesunate_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.153392
SPTBN1 spectrin, beta, non-erythrocytic 1 0.129605
DSCAM Down syndrome cell adhesion molecule 0.110431
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0890403
MYH9 myosin, heavy chain 9, non-muscle 0.0808981
ITGA6 integrin, alpha 6 0.0782305
SMAD3 SMAD family member 3 0.0704849
CANX calnexin 0.0678516
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0665662
STK24 serine/threonine kinase 24 0.064964
APP amyloid beta (A4) precursor protein 0.0634529
IFNGR1 interferon gamma receptor 1 0.0624897
SHB Src homology 2 domain containing adaptor protein B 0.0599869
ADAR adenosine deaminase, RNA-specific 0.0578211
LDHA lactate dehydrogenase A 0.0569536
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0562536
ATP11A ATPase, class VI, type 11A 0.0560353
SRRM2 serine/arginine repetitive matrix 2 0.0559837
EPHB2 EPH receptor B2 0.0558844
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0554434
SPATA13 spermatogenesis associated 13 0.0502019
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0497789
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.045823
PHF3 PHD finger protein 3 0.0453075
FAT1 FAT atypical cadherin 1 0.044648
MCL1 myeloid cell leukemia 1 0.0445283
ANXA2 annexin A2 0.0438098
KRT18 keratin 18, type I 0.0437876
EZR ezrin 0.0430365
SDC4 syndecan 4 0.0419532
C6ORF132 chromosome 6 open reading frame 132 0.0417257
MLPH melanophilin 0.0414675
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0405264
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.040082
PADI1 peptidyl arginine deiminase, type I 0.0395646
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0395391
NCOR2 nuclear receptor corepressor 2 0.0394393
TSC22D1 TSC22 domain family, member 1 0.0385343
MUC13 mucin 13, cell surface associated 0.0384772
MYO1E myosin IE 0.0373531
PRSS3 protease, serine, 3 0.0363061
COPA coatomer protein complex, subunit alpha 0.0362321
SPRED1 sprouty-related, EVH1 domain containing 1 0.0354052
MPRIP myosin phosphatase Rho interacting protein 0.0336331
HDLBP high density lipoprotein binding protein 0.0334591
RNF43 ring finger protein 43 0.0332371
TC2N tandem C2 domains, nuclear 0.0327412
SEPTIN9 septin 9 0.0326125
TPM3 tropomyosin 3 0.0324275
SLK STE20-like kinase 0.0320257
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.031871
BCL2L1 BCL2-like 1 0.0317091
YAP1 Yes-associated protein 1 0.0316433
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0315174
DUSP16 dual specificity phosphatase 16 0.0314157
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0311196
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0304446
CTSB cathepsin B 0.0303284
CHD1 chromodomain helicase DNA binding protein 1 0.0299845
EIF3A eukaryotic translation initiation factor 3, subunit A 0.029796
NCKAP5 NCK-associated protein 5 0.0293371
LCN2 lipocalin 2 0.0286277
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0281071
APLP2 amyloid beta (A4) precursor-like protein 2 0.0280934
RPL3 ribosomal protein L3 0.0280338
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae) 0.027924
DSPP dentin sialophosphoprotein 0.0277848
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0275715
CTNND1 catenin (cadherin-associated protein), delta 1 0.0274138
CDHR2 cadherin-related family member 2 0.0273524
GOLGA3 golgin A3 0.0273119
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0272963
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.0270399
MACF1 microtubule-actin crosslinking factor 1 0.0270113
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0269827
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0266531
ANXA11 annexin A11 0.0265056
OARD1 O-acyl-ADP-ribose deacylase 1 0.0264591
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0263626
RBM33 RNA binding motif protein 33 0.0262399
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0258702
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0258194
BICRAL BICRA like chromatin remodeling complex associated protein 0.0257503
MYO10 myosin X 0.025647
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.025568
ERRFI1 ERBB receptor feedback inhibitor 1 0.0254868
ACTN4 actinin, alpha 4 0.0252953
RUNX1 runt-related transcription factor 1 0.0252067
CDK5RAP3 CDK5 regulatory subunit associated protein 3 0.0250988
AKAP13 A kinase (PRKA) anchor protein 13 0.0248374
YBX3 Y box binding protein 3 0.0246904
IQGAP1 IQ motif containing GTPase activating protein 1 0.0246769
SFTPA2 surfactant protein A2 0.0246691
ABHD2 abhydrolase domain containing 2 0.0243119
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.024169
SOD2 superoxide dismutase 2, mitochondrial 0.0241182
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0240978
SMYD3 SET and MYND domain containing 3 0.024089
CTBP2 C-terminal binding protein 2 0.0239838
ATP10B ATPase, class V, type 10B 0.0239619

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.120328
GMDS GDP-mannose 4,6-dehydratase -0.119888
FNDC3B fibronectin type III domain containing 3B -0.114496
ZMYND8 zinc finger, MYND-type containing 8 -0.100797
INTS6 integrator complex subunit 6 -0.0986673
PRKCA protein kinase C, alpha -0.0751007
STAT1 signal transducer and activator of transcription 1, 91kDa -0.074538
NDRG1 N-myc downstream regulated 1 -0.0686667
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0661589
EPSTI1 epithelial stromal interaction 1 (breast) -0.0602955
XAF1 XIAP associated factor 1 -0.0596095
STS steroid sulfatase (microsomal), isozyme S -0.0569674
LYZ lysozyme -0.0543836
PLSCR2 phospholipid scramblase 2 -0.0539257
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.053273
EGR1 early growth response 1 -0.0531731
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0529862
IGFBP3 insulin-like growth factor binding protein 3 -0.052936
SP100 SP100 nuclear antigen -0.0524514
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0513527
BTBD9 BTB (POZ) domain containing 9 -0.0495556
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0471771
MAML2 mastermind-like 2 (Drosophila) -0.0468937
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 -0.0464418
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0452171
RAB7A RAB7A, member RAS oncogene family -0.0442619
RIGI RNA sensor RIG-I -0.0435807
PLSCR1 phospholipid scramblase 1 -0.0431803
ZBTB20 zinc finger and BTB domain containing 20 -0.0421341
ERBIN erbb2 interacting protein -0.0410751
MUC20 mucin 20, cell surface associated -0.0403405
VCL vinculin -0.0398871
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 -0.0392748
VMP1 vacuole membrane protein 1 -0.0384755
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0383593
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0381515
MBNL2 muscleblind-like splicing regulator 2 -0.0381216
TPT1 tumor protein, translationally-controlled 1 -0.0377846
TSHZ2 teashirt zinc finger homeobox 2 -0.0376522
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.036072
TRIO trio Rho guanine nucleotide exchange factor -0.0357565
TXNIP thioredoxin interacting protein -0.0351037
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 -0.0340952
H1-0 H1.0 linker histone -0.0333108
SSH2 slingshot protein phosphatase 2 -0.0333107
PATJ PATJ crumbs cell polarity complex component -0.0320403
RAD51B RAD51 paralog B -0.0309859
GCLC glutamate-cysteine ligase, catalytic subunit -0.0307426
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0306944
ARHGAP26 Rho GTPase activating protein 26 -0.0303215
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa -0.0295559
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0295394
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.028802
DDIT3 DNA-damage-inducible transcript 3 -0.0283194
CCDC146 coiled-coil domain containing 146 -0.0279409
POF1B premature ovarian failure, 1B -0.0277826
TMSB10 thymosin beta 10 -0.0275592
ZSWIM6 zinc finger, SWIM-type containing 6 -0.027388
FNDC3A fibronectin type III domain containing 3A -0.0272959
PTMA prothymosin, alpha -0.0269675
RNF213 ring finger protein 213 -0.0268233
BABAM2 BRISC and BRCA1 A complex member 2 -0.0268036
APOL1 apolipoprotein L, 1 -0.0266155
MT2A metallothionein 2A -0.0263229
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0263226
SQSTM1 sequestosome 1 -0.0261581
SAMD9L sterile alpha motif domain containing 9-like -0.0260476
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0259925
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0256803
PCED1B PC-esterase domain containing 1B -0.0256731
CMIP c-Maf inducing protein -0.0255942
FBXO39 F-box protein 39 -0.0253356
SLC38A1 solute carrier family 38, member 1 -0.0252828
ESRP1 epithelial splicing regulatory protein 1 -0.0249741
CSTB cystatin B (stefin B) -0.0246351
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0245962
B3GALT5 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 -0.0239918
DYNC2I1 dynein 2 intermediate chain 1 -0.0238216
WSB1 WD repeat and SOCS box containing 1 -0.0237296
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.023441
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0233772
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0231455
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0230221
HLA-B major histocompatibility complex, class I, B -0.0227654
PTGR1 prostaglandin reductase 1 -0.0227478
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.0223005
FTL ferritin, light polypeptide -0.0216398
VDAC1 voltage-dependent anion channel 1 -0.0215788
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0214836
CTSD cathepsin D -0.0212355
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0212143
SPIDR scaffolding protein involved in DNA repair -0.0211702
SCARB1 scavenger receptor class B, member 1 -0.0211253
AREG amphiregulin -0.0208881
DGKH diacylglycerol kinase, eta -0.0207931
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0207551
FHIT fragile histidine triad -0.0206534
DSCAML1 Down syndrome cell adhesion molecule like 1 -0.0202104
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0200937
JAK1 Janus kinase 1 -0.0200453