Ataluren_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ataluren perturbation in A-172 cell line (Tahoe Therapeutics)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the Ataluren_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.131027
MYH9 myosin, heavy chain 9, non-muscle 0.113767
COL3A1 collagen, type III, alpha 1 0.107467
CALR calreticulin 0.105354
CSTB cystatin B (stefin B) 0.0946846
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0938633
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0937623
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0879812
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0839346
APP amyloid beta (A4) precursor protein 0.0792777
TRIO trio Rho guanine nucleotide exchange factor 0.0706475
COL5A2 collagen, type V, alpha 2 0.0705469
SFTPA2 surfactant protein A2 0.0700532
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0693413
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.066311
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0635089
NFE2L1 nuclear factor, erythroid 2-like 1 0.062911
THBS2 thrombospondin 2 0.0619285
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0617175
CANX calnexin 0.0613535
TMSB4X thymosin beta 4, X-linked 0.0599943
OGA O-GlcNAcase 0.0594212
AUTS2 autism susceptibility candidate 2 0.0591607
DST dystonin 0.0589706
ELL2 elongation factor, RNA polymerase II, 2 0.0589056
SOD2 superoxide dismutase 2, mitochondrial 0.0584507
TPM3 tropomyosin 3 0.0576373
PALM2AKAP2 PALM2 and AKAP2 fusion 0.052443
CTSB cathepsin B 0.0517404
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0502395
PDIA6 protein disulfide isomerase family A, member 6 0.0502101
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0496693
AHNAK2 AHNAK nucleoprotein 2 0.0476937
MYOF myoferlin 0.0463503
FLNB filamin B, beta 0.0456548
SLC39A11 solute carrier family 39, member 11 0.0455173
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0434369
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0432462
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0422073
CD44 CD44 molecule (Indian blood group) 0.0414659
AKAP12 A kinase (PRKA) anchor protein 12 0.0406096
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0405391
ERRFI1 ERBB receptor feedback inhibitor 1 0.0402459
ZEB1 zinc finger E-box binding homeobox 1 0.0397586
SCRN1 secernin 1 0.0397403
WDFY1 WD repeat and FYVE domain containing 1 0.0393678
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0389699
CD109 CD109 molecule 0.0388254
SBF2 SET binding factor 2 0.0387982
CLIP2 CAP-GLY domain containing linker protein 2 0.0385926
LDHA lactate dehydrogenase A 0.0382643
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0376319
NAP1L1 nucleosome assembly protein 1-like 1 0.0376254
USP9X ubiquitin specific peptidase 9, X-linked 0.0374761
GOLGA4 golgin A4 0.0369533
EEF2 eukaryotic translation elongation factor 2 0.0362231
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0361369
MACF1 microtubule-actin crosslinking factor 1 0.0361217
COL4A2 collagen, type IV, alpha 2 0.035263
LOXL2 lysyl oxidase-like 2 0.03462
ANKRD11 ankyrin repeat domain 11 0.0345624
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0343321
MEF2A myocyte enhancer factor 2A 0.0339693
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 0.0338131
KDM3A lysine (K)-specific demethylase 3A 0.0333427
SLC22A23 solute carrier family 22, member 23 0.0331475
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0324284
RAB10 RAB10, member RAS oncogene family 0.032169
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0321136
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0317839
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0313106
GLS2 glutaminase 2 (liver, mitochondrial) 0.0313073
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0312259
CLTC clathrin, heavy chain (Hc) 0.030794
ATP13A3 ATPase type 13A3 0.0304277
LOX lysyl oxidase 0.0301628
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0296494
FSTL1 follistatin-like 1 0.0296123
SET SET nuclear proto-oncogene 0.029368
IGF2R insulin-like growth factor 2 receptor 0.0291731
MBNL2 muscleblind-like splicing regulator 2 0.0291322
RND3 Rho family GTPase 3 0.0288685
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0287636
UBQLN1 ubiquilin 1 0.0285237
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0284078
COPG1 coatomer protein complex, subunit gamma 1 0.0283246
DLG1 discs, large homolog 1 (Drosophila) 0.028226
DENND5A DENN/MADD domain containing 5A 0.0281998
PLEC plectin 0.0281951
RHOBTB3 Rho-related BTB domain containing 3 0.0276307
FBN1 fibrillin 1 0.0275388
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0274601
IQGAP1 IQ motif containing GTPase activating protein 1 0.0274367
FNDC3B fibronectin type III domain containing 3B 0.0274358
SPIRE1 spire-type actin nucleation factor 1 0.0273125
EIF4H eukaryotic translation initiation factor 4H 0.0271879
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 0.0271153
TNIP1 TNFAIP3 interacting protein 1 0.0270548
CSDE1 cold shock domain containing E1, RNA-binding 0.0267255
NPC1 Niemann-Pick disease, type C1 0.026572

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.245251
IGFBP3 insulin-like growth factor binding protein 3 -0.235982
TMSB10 thymosin beta 10 -0.122654
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.117285
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0940744
VIM vimentin -0.0809677
MX2 MX dynamin-like GTPase 2 -0.0741901
MYADM myeloid-associated differentiation marker -0.0707842
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0574139
MEIS2 Meis homeobox 2 -0.0569453
ZBTB20 zinc finger and BTB domain containing 20 -0.0521667
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0513671
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0490637
SUCNR1 succinate receptor 1 -0.0438306
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0430032
HLA-B major histocompatibility complex, class I, B -0.0429862
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0415745
RIGI RNA sensor RIG-I -0.0410185
PLAT plasminogen activator, tissue -0.0405606
POTEF POTE ankyrin domain family, member F -0.0402115
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0400016
TAPBP TAP binding protein (tapasin) -0.0387616
COL1A2 collagen, type I, alpha 2 -0.0381105
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0380267
MAP1B microtubule-associated protein 1B -0.0373414
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0366488
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0364741
FOSL1 FOS-like antigen 1 -0.0359265
CUX1 cut-like homeobox 1 -0.0352655
HLA-C major histocompatibility complex, class I, C -0.0339091
COL8A1 collagen, type VIII, alpha 1 -0.0328674
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.032166
PDE4D phosphodiesterase 4D, cAMP-specific -0.0318841
TIMP2 TIMP metallopeptidase inhibitor 2 -0.031882
EGR1 early growth response 1 -0.0315395
VEGFA vascular endothelial growth factor A -0.0310458
IFITM3 interferon induced transmembrane protein 3 -0.0307256
CCND1 cyclin D1 -0.030112
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0300512
ACTG1 actin gamma 1 -0.0278274
ZNFX1 zinc finger, NFX1-type containing 1 -0.0273258
CYB5R3 cytochrome b5 reductase 3 -0.0270147
HSPB1 heat shock 27kDa protein 1 -0.026875
LY6E lymphocyte antigen 6 complex, locus E -0.0266173
COPA coatomer protein complex, subunit alpha -0.0263487
SLC38A2 solute carrier family 38, member 2 -0.0258312
IFI16 interferon, gamma-inducible protein 16 -0.0256468
LMNA lamin A/C -0.025456
HLA-A major histocompatibility complex, class I, A -0.0251453
CDH13 cadherin 13 -0.0248891
IFITM1 interferon induced transmembrane protein 1 -0.024773
WARS1 tryptophanyl-tRNA synthetase 1 -0.0246953
CD99 CD99 molecule -0.0245315
RPL28 ribosomal protein L28 -0.0238882
RTN4 reticulon 4 -0.0238291
FN1 fibronectin 1 -0.0237557
TAGLN2 transgelin 2 -0.0236509
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0235155
ISG15 ISG15 ubiquitin-like modifier -0.0230507
ENO2 enolase 2 (gamma, neuronal) -0.0229329
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0229278
PXDN peroxidasin -0.0227466
MT2A metallothionein 2A -0.0224396
SP100 SP100 nuclear antigen -0.0220654
IFIH1 interferon induced with helicase C domain 1 -0.0218713
UBC ubiquitin C -0.0218571
LAMA5 laminin, alpha 5 -0.02152
SMIM44 small integral membrane protein 44 -0.0213396
DEPP1 DEPP autophagy regulator 1 -0.0212313
NAV1 neuron navigator 1 -0.0211622
PLSCR1 phospholipid scramblase 1 -0.0208396
RNF213 ring finger protein 213 -0.0207098
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0205955
FADS2 fatty acid desaturase 2 -0.020459
PFN1 profilin 1 -0.0202496
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0193736
JUN jun proto-oncogene -0.0190487
MTDH metadherin -0.0188429
JAZF1 JAZF zinc finger 1 -0.0187998
PKM pyruvate kinase, muscle -0.0187259
RPS15 ribosomal protein S15 -0.0187094
ACLY ATP citrate lyase -0.01868
SH3KBP1 SH3-domain kinase binding protein 1 -0.0186664
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0179845
RPS6 ribosomal protein S6 -0.0179509
SYT1 synaptotagmin I -0.0178893
EPSTI1 epithelial stromal interaction 1 (breast) -0.0176304
CTSD cathepsin D -0.0175554
TPI1 triosephosphate isomerase 1 -0.0175261
PML promyelocytic leukemia -0.017456
KCTD9 potassium channel tetramerization domain containing 9 -0.0173534
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein -0.0172685
FNDC3A fibronectin type III domain containing 3A -0.0172301
BPTF bromodomain PHD finger transcription factor -0.0170754
OASL 2'-5'-oligoadenylate synthetase-like -0.0169944
VDAC1 voltage-dependent anion channel 1 -0.0169461
RPL9 ribosomal protein L9 -0.0168894
IL7R interleukin 7 receptor -0.0167575
AFF3 AF4/FMR2 family, member 3 -0.0167356
CAV1 caveolin 1, caveolae protein, 22kDa -0.0166332