Ataluren_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ataluren perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ataluren_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EEF2 eukaryotic translation elongation factor 2 0.139591
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.116885
SET SET nuclear proto-oncogene 0.0986913
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0740881
ERRFI1 ERBB receptor feedback inhibitor 1 0.0735977
KTN1 kinectin 1 (kinesin receptor) 0.0656891
TMSB10 thymosin beta 10 0.0643374
LDHA lactate dehydrogenase A 0.0637525
MYH9 myosin, heavy chain 9, non-muscle 0.0631241
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0626778
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0609383
TMSB4X thymosin beta 4, X-linked 0.0585935
MT2A metallothionein 2A 0.0583062
PGK1 phosphoglycerate kinase 1 0.0568269
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.056692
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0541766
CALR calreticulin 0.0537774
SRRM2 serine/arginine repetitive matrix 2 0.053268
PDIA6 protein disulfide isomerase family A, member 6 0.0524741
MKI67 marker of proliferation Ki-67 0.0512905
RPL23 ribosomal protein L23 0.0502685
ENO1 enolase 1, (alpha) 0.0491153
SPAG9 sperm associated antigen 9 0.0477349
BIRC3 baculoviral IAP repeat containing 3 0.0468773
DST dystonin 0.0465172
RAI1 retinoic acid induced 1 0.0459369
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0447962
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0433537
SFTPA2 surfactant protein A2 0.043084
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.041498
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.041281
SLK STE20-like kinase 0.0409866
RPS12 ribosomal protein S12 0.0405116
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0385737
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0377386
TXNRD1 thioredoxin reductase 1 0.0376323
NUP58 nucleoporin 58 0.0372753
EIF1 eukaryotic translation initiation factor 1 0.0371887
FTH1 ferritin, heavy polypeptide 1 0.0370771
FTL ferritin, light polypeptide 0.0363125
TPM3 tropomyosin 3 0.0362751
RPL3 ribosomal protein L3 0.0361451
CAPRIN2 caprin family member 2 0.0355122
MACF1 microtubule-actin crosslinking factor 1 0.0340907
MT1X metallothionein 1X 0.032697
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0326106
TMEM41B transmembrane protein 41B 0.0321063
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0314825
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0311939
EZR ezrin 0.0308318
ARRDC3 arrestin domain containing 3 0.0308227
BCAR3 breast cancer anti-estrogen resistance 3 0.0308107
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0302464
GOLGA4 golgin A4 0.029721
CCNL1 cyclin L1 0.0291647
CENPF centromere protein F, 350/400kDa 0.0291169
KMT2E lysine (K)-specific methyltransferase 2E 0.0290127
HDGF hepatoma-derived growth factor 0.0286958
DDIT4 DNA-damage-inducible transcript 4 0.0284903
LOC112694756 uncharaterized LOC112694756 0.0283765
CANX calnexin 0.0282321
KPNB1 karyopherin (importin) beta 1 0.0281081
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0276897
PRRC2C proline-rich coiled-coil 2C 0.027369
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0266997
CSNK1A1 casein kinase 1, alpha 1 0.0262234
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0254005
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0251234
YEATS2 YEATS domain containing 2 0.0251126
RAB6A RAB6A, member RAS oncogene family 0.0250452
MATR3 matrin 3 0.0246714
XPO1 exportin 1 0.0246655
KMT2C lysine (K)-specific methyltransferase 2C 0.0246458
USP9X ubiquitin specific peptidase 9, X-linked 0.024595
PCBP2 poly(rC) binding protein 2 0.0244996
RACK1 receptor for activated C kinase 1 0.0244744
SBNO1 strawberry notch homolog 1 (Drosophila) 0.0244354
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0244171
CSDE1 cold shock domain containing E1, RNA-binding 0.0243148
DSCAM Down syndrome cell adhesion molecule 0.0242052
SRSF4 serine/arginine-rich splicing factor 4 0.0241683
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0239595
RPS3 ribosomal protein S3 0.0238403
KIF5B kinesin family member 5B 0.023418
MYOF myoferlin 0.0232809
MCL1 myeloid cell leukemia 1 0.0232521
FNIP1 folliculin interacting protein 1 0.0228844
HSPA8 heat shock 70kDa protein 8 0.0227499
ANLN anillin, actin binding protein 0.0226498
ADAM17 ADAM metallopeptidase domain 17 0.0224351
SGK1 serum/glucocorticoid regulated kinase 1 0.021873
TPR translocated promoter region, nuclear basket protein 0.021805
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0217915
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0212047
TMED2 transmembrane emp24 domain trafficking protein 2 0.0210329
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0210179
CLIP2 CAP-GLY domain containing linker protein 2 0.0210031
RPS2 ribosomal protein S2 0.020979
YBX1 Y box binding protein 1 0.0208277
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0208011

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.381989
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.132136
PSD3 pleckstrin and Sec7 domain containing 3 -0.0777933
TPT1 tumor protein, translationally-controlled 1 -0.0743259
CD44 CD44 molecule (Indian blood group) -0.0656528
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0573702
HLA-B major histocompatibility complex, class I, B -0.0547394
TM4SF1 transmembrane 4 L six family member 1 -0.0520732
TP63 tumor protein p63 -0.0516388
AHNAK AHNAK nucleoprotein -0.0429277
RPS24 ribosomal protein S24 -0.0427611
CADM2 cell adhesion molecule 2 -0.0408224
DPYD dihydropyrimidine dehydrogenase -0.0370035
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0369168
RPS6 ribosomal protein S6 -0.0352694
SP100 SP100 nuclear antigen -0.0340698
ACTG1 actin gamma 1 -0.0336474
ZDHHC14 zinc finger, DHHC-type containing 14 -0.0317084
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0306215
RPS23 ribosomal protein S23 -0.0294925
FMNL2 formin-like 2 -0.0292213
GCLM glutamate-cysteine ligase, modifier subunit -0.0291877
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0289242
FUS FUS RNA binding protein -0.0278901
IARS1 isoleucyl-tRNA synthetase 1 -0.0278335
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0275932
DLG1 discs, large homolog 1 (Drosophila) -0.0274147
CFAP299 cilia and flagella associated protein 299 -0.026194
WSB1 WD repeat and SOCS box containing 1 -0.0261656
TRIO trio Rho guanine nucleotide exchange factor -0.0261352
RPL38 ribosomal protein L38 -0.0253678
NPAS2 neuronal PAS domain protein 2 -0.0251819
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0251479
RUNX1 runt-related transcription factor 1 -0.0244452
EXOC4 exocyst complex component 4 -0.0242999
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0237797
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0233867
EMP1 epithelial membrane protein 1 -0.0227424
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0226582
CDK6 cyclin-dependent kinase 6 -0.0221848
ZNF217 zinc finger protein 217 -0.0221763
VDAC1 voltage-dependent anion channel 1 -0.0204567
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0204172
CDK12 cyclin-dependent kinase 12 -0.0201184
IFI6 interferon, alpha-inducible protein 6 -0.0199015
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0193493
ADGRG6 adhesion G protein-coupled receptor G6 -0.0193418
ANXA2 annexin A2 -0.0192703
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0190682
PDE10A phosphodiesterase 10A -0.0183008
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0182921
RPL19 ribosomal protein L19 -0.0182012
FAF1 Fas (TNFRSF6) associated factor 1 -0.017779
TUBB tubulin, beta class I -0.0171897
RPS29 ribosomal protein S29 -0.0170585
GPHN gephyrin -0.0170456
RPS15 ribosomal protein S15 -0.0164978
GLS2 glutaminase 2 (liver, mitochondrial) -0.0163476
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0161575
RPLP0 ribosomal protein, large, P0 -0.016133
EXT1 exostosin glycosyltransferase 1 -0.0160023
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0157288
SRGN serglycin -0.0156848
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0154787
HMGB1 high mobility group box 1 -0.0153122
IFRD1 interferon-related developmental regulator 1 -0.0152446
ZNFX1 zinc finger, NFX1-type containing 1 -0.0149869
ZFAND3 zinc finger, AN1-type domain 3 -0.0149743
JMJD1C jumonji domain containing 1C -0.0149417
WARS1 tryptophanyl-tRNA synthetase 1 -0.0148108
FOXN2 forkhead box N2 -0.0147958
UBC ubiquitin C -0.0146507
RIGI RNA sensor RIG-I -0.0146047
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0144876
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.014277
OSMR oncostatin M receptor -0.0142626
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0140971
NT5C2 5'-nucleotidase, cytosolic II -0.0140304
NF1 neurofibromin 1 -0.0140215
GTF2B general transcription factor IIB -0.0138195
CD2AP CD2-associated protein -0.013663
ZNF609 zinc finger protein 609 -0.0136399
PLSCR1 phospholipid scramblase 1 -0.0136225
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0136214
RPS11 ribosomal protein S11 -0.0135544
RGS4 regulator of G-protein signaling 4 -0.0135418
LRRC23 leucine rich repeat containing 23 -0.0134744
RPL28 ribosomal protein L28 -0.0134561
INTS6 integrator complex subunit 6 -0.0134169
TFRC transferrin receptor -0.0132748
POTEF POTE ankyrin domain family, member F -0.0131948
NASP nuclear autoantigenic sperm protein (histone-binding) -0.0131239
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0129605
CUX1 cut-like homeobox 1 -0.0129396
NPR2 natriuretic peptide receptor 2 -0.012773
RPL36A ribosomal protein L36a -0.0127645
THSD4 thrombospondin, type I, domain containing 4 -0.0127164
GMDS GDP-mannose 4,6-dehydratase -0.012703
TCF12 transcription factor 12 -0.0126992
NT5DC3 5'-nucleotidase domain containing 3 -0.0126506