Ataluren_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ataluren perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ataluren_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.123659
NAMPT nicotinamide phosphoribosyltransferase 0.0957822
RBM39 RNA binding motif protein 39 0.0944464
PGK1 phosphoglycerate kinase 1 0.0852022
ELL2 elongation factor, RNA polymerase II, 2 0.0742918
ZNF292 zinc finger protein 292 0.0742305
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0675327
NKD1 naked cuticle homolog 1 (Drosophila) 0.0669707
SSBP2 single-stranded DNA binding protein 2 0.0658925
NUP58 nucleoporin 58 0.0644718
CDC73 cell division cycle 73 0.0634143
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0631105
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0623691
CCNL1 cyclin L1 0.060634
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0570006
CERS6 ceramide synthase 6 0.0567961
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0564528
CSNK1A1 casein kinase 1, alpha 1 0.0552931
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0551167
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0548496
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0546549
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0543387
ANKRD11 ankyrin repeat domain 11 0.053898
KDM6A lysine (K)-specific demethylase 6A 0.0538031
FAM13A family with sequence similarity 13, member A 0.0514976
PAPOLA poly(A) polymerase alpha 0.0512182
ZFAND3 zinc finger, AN1-type domain 3 0.0498842
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0494891
TCEA2 transcription elongation factor A (SII), 2 0.0493226
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0489217
LCORL ligand dependent nuclear receptor corepressor-like 0.0489018
ERRFI1 ERBB receptor feedback inhibitor 1 0.0487902
EEF2 eukaryotic translation elongation factor 2 0.0485341
ACTN4 actinin, alpha 4 0.0484787
EIF3H eukaryotic translation initiation factor 3, subunit H 0.0476629
KMT2E lysine (K)-specific methyltransferase 2E 0.0475817
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0473498
DST dystonin 0.0461028
HDLBP high density lipoprotein binding protein 0.0458939
WDR43 WD repeat domain 43 0.0450676
GOLGA4 golgin A4 0.0448614
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0443952
LRP12 low density lipoprotein receptor-related protein 12 0.0439874
GSK3B glycogen synthase kinase 3 beta 0.0437076
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0433054
NGLY1 N-glycanase 1 0.0431518
PNISR PNN-interacting serine/arginine-rich protein 0.0429811
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0429445
SRRM2 serine/arginine repetitive matrix 2 0.0429119
HMBOX1 homeobox containing 1 0.0427377
KIF5B kinesin family member 5B 0.0425461
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0425375
NF1 neurofibromin 1 0.0425369
SYT1 synaptotagmin I 0.042514
GPC6 glypican 6 0.0423838
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0422912
KMT2C lysine (K)-specific methyltransferase 2C 0.0422214
SCAF8 SR-related CTD-associated factor 8 0.0421254
PRRC2C proline-rich coiled-coil 2C 0.0417963
RLF rearranged L-myc fusion 0.0416961
FMNL2 formin-like 2 0.041241
USP15 ubiquitin specific peptidase 15 0.0410532
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0410435
HOOK2 hook microtubule-tethering protein 2 0.0405207
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0401164
USP9X ubiquitin specific peptidase 9, X-linked 0.0400425
PRRC2B proline-rich coiled-coil 2B 0.0397905
ANKRD17 ankyrin repeat domain 17 0.0390058
GMDS GDP-mannose 4,6-dehydratase 0.038998
MON2 MON2 homolog (S. cerevisiae) 0.0385303
PARD3 par-3 family cell polarity regulator 0.0385037
TRA2B transformer 2 beta homolog (Drosophila) 0.0384642
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0382552
KANSL1 KAT8 regulatory NSL complex subunit 1 0.0380793
CSDE1 cold shock domain containing E1, RNA-binding 0.0379609
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0378354
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0378329
PDK3 pyruvate dehydrogenase kinase, isozyme 3 0.0378093
NCKAP1 NCK-associated protein 1 0.0377834
PUM1 pumilio RNA-binding family member 1 0.0377717
TBL1X transducin (beta)-like 1X-linked 0.0377518
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0376405
PDE4B phosphodiesterase 4B, cAMP-specific 0.0375017
ARRDC3 arrestin domain containing 3 0.0373568
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0372582
GARS1 glycyl-tRNA synthetase 1 0.0371416
SET SET nuclear proto-oncogene 0.0369338
QKI QKI, KH domain containing, RNA binding 0.0368725
ATP13A3 ATPase type 13A3 0.0368663
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0368301
NOP58 NOP58 ribonucleoprotein 0.036714
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0365764
RSRC2 arginine/serine-rich coiled-coil 2 0.036393
RPS4X ribosomal protein S4, X-linked 0.0362772
SPATA13 spermatogenesis associated 13 0.036093
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0359764
DLC1 DLC1 Rho GTPase activating protein 0.035882
TCF12 transcription factor 12 0.0358383
WDR26 WD repeat domain 26 0.0356718
PCM1 pericentriolar material 1 0.0351182

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.187577
TMSB10 thymosin beta 10 -0.155588
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.133998
LMO7 LIM domain 7 -0.131511
BACE2 beta-site APP-cleaving enzyme 2 -0.113378
TM4SF1 transmembrane 4 L six family member 1 -0.110429
LAMB3 laminin, beta 3 -0.109096
PRKCA protein kinase C, alpha -0.0978024
ATOSA atos homolog A -0.0875086
LAMC2 laminin, gamma 2 -0.0855664
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0855343
B2M beta-2-microglobulin -0.0821958
SMYD3 SET and MYND domain containing 3 -0.0767723
FTL ferritin, light polypeptide -0.0743001
RPS25 ribosomal protein S25 -0.0704392
MT2A metallothionein 2A -0.0700405
KATNBL1 katanin p80 subunit B-like 1 -0.0695135
TXNRD1 thioredoxin reductase 1 -0.0692058
VIM vimentin -0.0664357
SAMD4A sterile alpha motif domain containing 4A -0.0659197
MYO1E myosin IE -0.0649525
AK1 adenylate kinase 1 -0.0624511
HLA-A major histocompatibility complex, class I, A -0.0604515
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0586344
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced -0.058362
UBC ubiquitin C -0.0574659
SVIL supervillin -0.0545873
CAPN2 calpain 2, (m/II) large subunit -0.054517
RPL35A ribosomal protein L35a -0.0532404
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0528834
ESYT2 extended synaptotagmin-like protein 2 -0.0517131
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0513637
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.051272
TPM4 tropomyosin 4 -0.0501304
HLA-B major histocompatibility complex, class I, B -0.0500311
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0498698
GLIS3 GLIS family zinc finger 3 -0.0493911
F3 coagulation factor III (thromboplastin, tissue factor) -0.0485552
ZNFX1 zinc finger, NFX1-type containing 1 -0.047722
KYNU kynureninase -0.0474496
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0470151
KRT19 keratin 19, type I -0.0468169
LIMCH1 LIM and calponin homology domains 1 -0.0467083
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0464161
RPS21 ribosomal protein S21 -0.0448611
TPT1 tumor protein, translationally-controlled 1 -0.0440891
FN1 fibronectin 1 -0.0440875
STAU1 staufen double-stranded RNA binding protein 1 -0.0438417
S100A11 S100 calcium binding protein A11 -0.0437654
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0434336
RAB22A RAB22A, member RAS oncogene family -0.0434021
ANKLE2 ankyrin repeat and LEM domain containing 2 -0.0430024
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.042662
GNAS GNAS complex locus -0.0420903
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0420863
PKM pyruvate kinase, muscle -0.0419848
MCTP2 multiple C2 domains, transmembrane 2 -0.0411774
RBM47 RNA binding motif protein 47 -0.0411058
MARCHF6 membrane associated ring-CH-type finger 6 -0.0410003
SEC31A SEC31 homolog A (S. cerevisiae) -0.0409966
IGF1R insulin-like growth factor 1 receptor -0.0409296
CEMIP cell migration inducing protein, hyaluronan binding -0.0408929
BZW1 basic leucine zipper and W2 domains 1 -0.0406605
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0400856
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0400536
S100A10 S100 calcium binding protein A10 -0.0400325
TMCC3 transmembrane and coiled-coil domain family 3 -0.0397203
CDCP1 CUB domain containing protein 1 -0.0396799
PLAUR plasminogen activator, urokinase receptor -0.0393803
CLIP1 CAP-GLY domain containing linker protein 1 -0.0389666
IGFBP3 insulin-like growth factor binding protein 3 -0.0389635
CD44 CD44 molecule (Indian blood group) -0.0388506
ANTXR2 anthrax toxin receptor 2 -0.0382565
ANXA2 annexin A2 -0.0381858
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.0381824
RPL15 ribosomal protein L15 -0.038037
RPS11 ribosomal protein S11 -0.0379708
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0378848
UBE2H ubiquitin-conjugating enzyme E2H -0.0378826
RPS3 ribosomal protein S3 -0.0376014
PRSS23 protease, serine, 23 -0.0375853
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0375623
DOCK5 dedicator of cytokinesis 5 -0.0374751
RPS24 ribosomal protein S24 -0.0374361
DOCK4 dedicator of cytokinesis 4 -0.0373855
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0370496
TJP1 tight junction protein 1 -0.036938
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0367993
ARHGAP21 Rho GTPase activating protein 21 -0.0366106
CSTB cystatin B (stefin B) -0.0364578
RPS23 ribosomal protein S23 -0.0364379
JMJD1C jumonji domain containing 1C -0.0363807
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0363452
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0361653
S100A6 S100 calcium binding protein A6 -0.0361452
TMPRSS4 transmembrane protease, serine 4 -0.0361047
GRB10 growth factor receptor-bound protein 10 -0.035684
DLG1 discs, large homolog 1 (Drosophila) -0.0356608
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0353825
NPEPPS aminopeptidase puromycin sensitive -0.0353813