Ataluren_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Ataluren perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Ataluren_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DST dystonin 0.12038
MYH9 myosin, heavy chain 9, non-muscle 0.0900479
KMT2C lysine (K)-specific methyltransferase 2C 0.0662427
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0624577
PDIA6 protein disulfide isomerase family A, member 6 0.0577343
SRP54 signal recognition particle 54kDa 0.0568548
ZEB2 zinc finger E-box binding homeobox 2 0.0490984
ZNF292 zinc finger protein 292 0.048595
WDR43 WD repeat domain 43 0.0432445
SPAG9 sperm associated antigen 9 0.0428794
TSC22D2 TSC22 domain family, member 2 0.0427737
FNDC3B fibronectin type III domain containing 3B 0.0425915
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0413541
FBXO11 F-box protein 11 0.040938
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.040608
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0394027
RAB6A RAB6A, member RAS oncogene family 0.0393325
CCNL1 cyclin L1 0.0385502
EEF2 eukaryotic translation elongation factor 2 0.0385379
HDAC9 histone deacetylase 9 0.0381258
MYO10 myosin X 0.0380107
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.0369703
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0369333
AKAP9 A kinase (PRKA) anchor protein 9 0.0365051
PRELID2 PRELI domain containing 2 0.0360599
KTN1 kinectin 1 (kinesin receptor) 0.0349189
NCKAP1 NCK-associated protein 1 0.0346433
CFL2 cofilin 2 (muscle) 0.0344755
ANXA1 annexin A1 0.0344452
FEM1C fem-1 homolog c (C. elegans) 0.033636
TARS1 threonyl-tRNA synthetase 1 0.0330335
ZNF608 zinc finger protein 608 0.0328133
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0325913
CALR calreticulin 0.032493
RPL3 ribosomal protein L3 0.0315517
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0309844
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0309031
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0307485
PRRC2B proline-rich coiled-coil 2B 0.0306513
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0294126
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0292797
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0288669
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0287365
SLK STE20-like kinase 0.0282443
UBA6 ubiquitin-like modifier activating enzyme 6 0.0278945
WASL Wiskott-Aldrich syndrome-like 0.0278529
SEC63 SEC63 homolog (S. cerevisiae) 0.0271919
TENM2 teneurin transmembrane protein 2 0.0270532
RREB1 ras responsive element binding protein 1 0.0270174
MLEC malectin 0.0270121
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0268224
QKI QKI, KH domain containing, RNA binding 0.0267111
CERT1 ceramide transporter 1 0.0267034
COG6 component of oligomeric golgi complex 6 0.0266152
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0264607
BIRC6 baculoviral IAP repeat containing 6 0.0261256
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0260262
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0258731
ANXA5 annexin A5 0.0253409
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0250378
LPIN2 lipin 2 0.0250139
IWS1 IWS1 homolog (S. cerevisiae) 0.0244709
SP3 Sp3 transcription factor 0.0242826
LYST lysosomal trafficking regulator 0.0240672
ADAM9 ADAM metallopeptidase domain 9 0.0240319
TMED2 transmembrane emp24 domain trafficking protein 2 0.0239637
VMP1 vacuole membrane protein 1 0.0239395
RIMKLB ribosomal modification protein rimK-like family member B 0.0233816
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0232867
CAPRIN1 cell cycle associated protein 1 0.0230577
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.0229639
FNIP1 folliculin interacting protein 1 0.022743
PRR16 proline rich 16 0.0227103
MON2 MON2 homolog (S. cerevisiae) 0.0226222
TBC1D12 TBC1 domain family, member 12 0.0225983
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0225161
ICE1 interactor of little elongation complex ELL subunit 1 0.0224121
COL5A2 collagen, type V, alpha 2 0.0222006
AGO3 argonaute RISC catalytic component 3 0.0221514
SREBF2 sterol regulatory element binding transcription factor 2 0.0221259
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0220827
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0220747
MB21D2 Mab-21 domain containing 2 0.0219061
N4BP2L2 NEDD4 binding protein 2-like 2 0.0217978
NUP58 nucleoporin 58 0.0217804
FOCAD focadhesin 0.0217301
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2 0.0211611
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0209401
PNN pinin, desmosome associated protein 0.0209189
PSMD11 proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 0.0209149
KIAA1958 KIAA1958 0.0208746
RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 0.0207264
PIAS2 protein inhibitor of activated STAT, 2 0.0206419
TRA2A transformer 2 alpha homolog (Drosophila) 0.0205453
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0205096
FAM168A family with sequence similarity 168, member A 0.0203424
GPC4 glypican 4 0.0202346
ZBTB35 zinc finger and BTB domain containing 35 0.020227
INSIG2 insulin induced gene 2 0.0201208
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0199826

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.157163
VIM vimentin -0.152216
RPS16 ribosomal protein S16 -0.129225
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.121078
PTMA prothymosin, alpha -0.119738
ACTG1 actin gamma 1 -0.114547
TMSB10 thymosin beta 10 -0.100019
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0979425
POTEF POTE ankyrin domain family, member F -0.0838422
RPS8 ribosomal protein S8 -0.0830827
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0816021
RPS6 ribosomal protein S6 -0.0782399
GNAS GNAS complex locus -0.076943
RPLP1 ribosomal protein, large, P1 -0.0753536
EMP1 epithelial membrane protein 1 -0.0724275
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0711988
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0694144
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0672487
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0644824
PCDH9 protocadherin 9 -0.0617298
AHNAK AHNAK nucleoprotein -0.0603178
UBC ubiquitin C -0.0600045
RPS21 ribosomal protein S21 -0.0580037
MYL12B myosin, light chain 12B, regulatory -0.0545466
RSL1D1 ribosomal L1 domain containing 1 -0.0512998
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0501022
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0479758
PBX3 pre-B-cell leukemia homeobox 3 -0.04794
RPL19 ribosomal protein L19 -0.0476636
GPC3 glypican 3 -0.0467358
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.045526
FOXP2 forkhead box P2 -0.0449232
TOX thymocyte selection-associated high mobility group box -0.0448596
RPL12 ribosomal protein L12 -0.0438731
TMSB4X thymosin beta 4, X-linked -0.0433656
MRPS30 mitochondrial ribosomal protein S30 -0.0432298
ADGRL2 adhesion G protein-coupled receptor L2 -0.0431591
RPS24 ribosomal protein S24 -0.0427019
S100A10 S100 calcium binding protein A10 -0.0425331
TUBA1B tubulin, alpha 1b -0.0423882
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0408348
RPS3 ribosomal protein S3 -0.0407083
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0406551
TPT1 tumor protein, translationally-controlled 1 -0.0395346
PCLO piccolo presynaptic cytomatrix protein -0.039121
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0390321
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0387251
RLF rearranged L-myc fusion -0.0386624
HMGB1 high mobility group box 1 -0.0384875
RPL34 ribosomal protein L34 -0.0380086
CDK12 cyclin-dependent kinase 12 -0.0379831
TJP1 tight junction protein 1 -0.0375985
RPL9 ribosomal protein L9 -0.0374339
RPS27A ribosomal protein S27a -0.0363372
LOC102724023 ES1 protein homolog, mitochondrial -0.0361271
TENM3 teneurin transmembrane protein 3 -0.0349243
NUSAP1 nucleolar and spindle associated protein 1 -0.0341253
PHIP pleckstrin homology domain interacting protein -0.033971
RPLP0 ribosomal protein, large, P0 -0.0338238
POU3F2 POU class 3 homeobox 2 -0.0334292
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0326369
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0325615
HSPB1 heat shock 27kDa protein 1 -0.0325019
NALF1 NALCN channel auxiliary factor 1 -0.0319999
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0317098
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0317004
RBM25 RNA binding motif protein 25 -0.0314897
NPAS3 neuronal PAS domain protein 3 -0.031348
TRPS1 trichorhinophalangeal syndrome I -0.0313108
TPX2 TPX2, microtubule-associated -0.0313092
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0310996
CDH19 cadherin 19, type 2 -0.0310326
KNL1 kinetochore scaffold 1 -0.0309164
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.0309057
COL3A1 collagen, type III, alpha 1 -0.0307576
RPS5 ribosomal protein S5 -0.030249
CENPE centromere protein E, 312kDa -0.0301369
RBM39 RNA binding motif protein 39 -0.0300655
CNRIP1 cannabinoid receptor interacting protein 1 -0.0296504
RPS15 ribosomal protein S15 -0.0295773
TPR translocated promoter region, nuclear basket protein -0.0295434
RPL38 ribosomal protein L38 -0.029446
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0294382
URI1 URI1, prefoldin-like chaperone -0.0293081
CADM2 cell adhesion molecule 2 -0.0289579
KIF4A kinesin family member 4A -0.0288452
WSB1 WD repeat and SOCS box containing 1 -0.0285919
NIPBL Nipped-B homolog (Drosophila) -0.0282702
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0282695
FAM171B family with sequence similarity 171, member B -0.0282358
ANKRD12 ankyrin repeat domain 12 -0.0281947
RAD51B RAD51 paralog B -0.0280447
RPL28 ribosomal protein L28 -0.027549
RPL31 ribosomal protein L31 -0.0274925
RPL32 ribosomal protein L32 -0.0274107
RTN4 reticulon 4 -0.0273484
SRP72 signal recognition particle 72kDa -0.0266127
TUBB tubulin, beta class I -0.0264379
FBL fibrillarin -0.0264277
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0263101