BALL-1 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Human acute lymphoblastoid leukemia cell line from peripheral blood. (BRENDA Tissue and Enzyme Source Ontology, BTO_0001148)
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Genes

97 genes with high or low copy number in BALL-1 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
PIK3C3 phosphatidylinositol 3-kinase, catalytic subunit type 3 3.12177
LINC00410 long intergenic non-protein coding RNA 410 2.36889
LINC00379 long intergenic non-protein coding RNA 379 2.30944
MIR19B1 microRNA 19b-1 2.283
MIR17HG miR-17-92 cluster host gene 2.283
GPC5 glypican 5 2.26395
MBD2 methyl-CpG binding domain protein 2 2.13622
TCF4 transcription factor 4 2.13622
SNORA37 small nucleolar RNA, H/ACA box 37 2.13622
MIR4529 microRNA 4529 2.1339
POLI polymerase (DNA directed) iota 2.1339
STARD6 StAR-related lipid transfer (START) domain containing 6 2.1316
RAB27B RAB27B, member RAS oncogene family 2.1316
C18ORF54 chromosome 18 open reading frame 54 2.1316
CCDC68 coiled-coil domain containing 68 2.1316
DYNAP dynactin associated protein 2.1316
ALPK2 alpha-kinase 2 2.12931
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 2.12703
MIR122 microRNA 122 2.12703
LINC00907 long intergenic non-protein coding RNA 907 2.12703
ZNF532 zinc finger protein 532 2.12703
MALT1 MALT1 paracaspase 2.12703
OACYLP O-acyltransferase like, pseudogene 2.12703
MIR3591 microRNA 3591 2.12703
DOK6 docking protein 6 2.12439
TMX3 thioredoxin-related transmembrane protein 3 2.12439
CCDC102B coiled-coil domain containing 102B 2.12439
BOD1L2 biorientation of chromosomes in cell division 1-like 2 2.12225
HMSD histocompatibility (minor) serpin domain containing 2.12225
RAX retina and anterior neural fold homeobox 2.12225
GRP gastrin-releasing peptide 2.12225
LMAN1 lectin, mannose-binding, 1 2.12225
LOC100505474 2.12225
CPLX4 complexin 4 2.12225
MC4R melanocortin 4 receptor 2.12225
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 2.12225
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 2.12225
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 2.12225
FECH ferrochelatase 2.12225
TXNL1 thioredoxin-like 1 2.12225
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2.12225
LINC-ROR long intergenic non-protein coding RNA, regulator of reprogramming 2.12225
NARS asparaginyl-tRNA synthetase 2.12225
SERPINB10 serpin peptidase inhibitor, clade B (ovalbumin), member 10 2.12225
ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 2.12225
WDR7 WD repeat domain 7 2.12225
SEC11C SEC11 homolog C (S. cerevisiae) 2.12225
MIR302F microRNA 302f 2.12225
ONECUT2 one cut homeobox 2 2.12225
CCBE1 collagen and calcium binding EGF domains 1 2.12225
DSEL dermatan sulfate epimerase-like 2.11167
CDH7 cadherin 7, type 2 2.11167
CDH19 cadherin 19, type 2 2.11167
LOC643542 uncharacterized LOC643542 2.11167
LINC00305 long intergenic non-protein coding RNA 305 2.10992
CDH20 cadherin 20, type 2 2.10992
SERPINB7 serpin peptidase inhibitor, clade B (ovalbumin), member 7 2.10992
LOC100505549 uncharacterized LOC100505549 2.10992
LOC400654 2.10992
LOC284294 uncharacterized LOC284294 2.10992
MIR5011 microRNA 5011 2.10177
LOC100996669 2.10038
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 2.10038
DSC2 desmocollin 2 2.10038
DSG1 desmoglein 1 2.10038
DSC3 desmocollin 3 2.10038
TNFRSF11A tumor necrosis factor receptor superfamily, member 11a, NFKB activator 2.10038
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 2.10038
ZCCHC2 zinc finger, CCHC domain containing 2 2.10038
DSG3 desmoglein 3 2.10038
RNF152 ring finger protein 152 2.10038
PIGN phosphatidylinositol glycan anchor biosynthesis, class N 2.10038
KIAA1468 KIAA1468 2.10038
DSG4 desmoglein 4 2.10038
SERPINB4 serpin peptidase inhibitor, clade B (ovalbumin), member 4 2.09431
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5 2.09431
SERPINB3 serpin peptidase inhibitor, clade B (ovalbumin), member 3 2.09431
SERPINB13 serpin peptidase inhibitor, clade B (ovalbumin), member 13 2.09431
KDSR 3-ketodihydrosphingosine reductase 2.09431
BCL2 B-cell CLL/lymphoma 2 2.09431
SERPINB12 serpin peptidase inhibitor, clade B (ovalbumin), member 12 2.09431
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae) 2.09431
SERPINB11 serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene) 2.09431
DSC1 desmocollin 1 2.09431

low copy number

Symbol Name Standardized Value
VPREB1 pre-B lymphocyte 1 -2.98179
ZNF280A zinc finger protein 280A -2.87511
ZNF280B zinc finger protein 280B -2.87511
LOC648691 -2.86885
PRAME preferentially expressed antigen in melanoma -2.86885
POM121L1P POM121 transmembrane nucleoporin-like 1, pseudogene -2.8682
GGTLC2 gamma-glutamyltransferase light chain 2 -2.8682
BCR breakpoint cluster region -2.86497
CDKN2C cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) -2.85279
MIR650 microRNA 650 -2.83656
MIR4767 microRNA 4767 -2.82043
HDHD1 haloacid dehalogenase-like hydrolase domain containing 1 -2.80688
STS steroid sulfatase (microsomal), isozyme S -2.7778