BI-3406_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-3406 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-3406_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.297427
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.237921
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.181608
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.160455
NLGN1 neuroligin 1 0.136196
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.135543
EEF2 eukaryotic translation elongation factor 2 0.100256
HMGA2 high mobility group AT-hook 2 0.0987435
TPI1 triosephosphate isomerase 1 0.0904168
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0813163
AHNAK AHNAK nucleoprotein 0.0801502
DST dystonin 0.0796395
BIRC3 baculoviral IAP repeat containing 3 0.0695807
RACK1 receptor for activated C kinase 1 0.0664703
TMSB10 thymosin beta 10 0.0631713
ADIPOR2 adiponectin receptor 2 0.0614362
AKAP12 A kinase (PRKA) anchor protein 12 0.0606353
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0585679
CALR calreticulin 0.0573334
LOC112694756 uncharaterized LOC112694756 0.0550886
PCDH7 protocadherin 7 0.0544972
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0508061
LDHA lactate dehydrogenase A 0.0489649
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0478715
ZSWIM6 zinc finger, SWIM-type containing 6 0.044692
ENO1 enolase 1, (alpha) 0.0434961
CLDN1 claudin 1 0.043086
HSPA8 heat shock 70kDa protein 8 0.0413971
LOC102724023 ES1 protein homolog, mitochondrial 0.0411556
ACTG1 actin gamma 1 0.0388
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0378999
RAB7A RAB7A, member RAS oncogene family 0.0368684
NAP1L1 nucleosome assembly protein 1-like 1 0.0368232
RPL3 ribosomal protein L3 0.0367859
RIMS2 regulating synaptic membrane exocytosis 2 0.0365077
EHBP1 EH domain binding protein 1 0.0355387
RPL4 ribosomal protein L4 0.035013
RPL23 ribosomal protein L23 0.0346952
GJA1 gap junction protein, alpha 1, 43kDa 0.0344387
RASAL2 RAS protein activator like 2 0.0331237
CMIP c-Maf inducing protein 0.032934
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0326183
RPS4X ribosomal protein S4, X-linked 0.0317833
ANXA1 annexin A1 0.0311539
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0310741
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0309712
PRDX1 peroxiredoxin 1 0.0305545
DOCK1 dedicator of cytokinesis 1 0.0300694
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0290967
TGM2 transglutaminase 2 0.0289575
SRRM2 serine/arginine repetitive matrix 2 0.028637
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0285668
CCND1 cyclin D1 0.0281538
PTMA prothymosin, alpha 0.0280437
FLNA filamin A, alpha 0.0277027
MSRB3 methionine sulfoxide reductase B3 0.0270856
CDK6 cyclin-dependent kinase 6 0.0270587
TPM4 tropomyosin 4 0.0263398
EGR1 early growth response 1 0.0262904
EEF1G eukaryotic translation elongation factor 1 gamma 0.0261957
YBX1 Y box binding protein 1 0.0257015
TPM3 tropomyosin 3 0.0256837
FAT1 FAT atypical cadherin 1 0.0254795
HDAC9 histone deacetylase 9 0.0252418
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0244851
TUBB tubulin, beta class I 0.0244582
YAP1 Yes-associated protein 1 0.0244005
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0243653
FSTL5 follistatin-like 5 0.0241402
CCN2 cellular communication network factor 2 0.0240722
PKM pyruvate kinase, muscle 0.0239476
CEP112 centrosomal protein 112kDa 0.0239263
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0239092
SKIL SKI-like proto-oncogene 0.0237977
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0237848
INTS6 integrator complex subunit 6 0.0237175
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0236019
UBB ubiquitin B 0.0231668
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0227493
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0226615
CCT7 chaperonin containing TCP1, subunit 7 (eta) 0.0225956
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0225616
LPP LIM domain containing preferred translocation partner in lipoma 0.0222901
FOXP1 forkhead box P1 0.0222089
RNF213 ring finger protein 213 0.0221578
ETV6 ets variant 6 0.0221014
PDGFC platelet derived growth factor C 0.0220383
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0215964
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0213276
EZR ezrin 0.0211725
SPDYA speedy/RINGO cell cycle regulator family member A 0.0211711
GNAS GNAS complex locus 0.0211554
JUN jun proto-oncogene 0.0210148
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0209802
HSPH1 heat shock 105kDa/110kDa protein 1 0.0208243
CANX calnexin 0.0207931
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0204205
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0203477
TUBA1B tubulin, alpha 1b 0.0202912
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0202738

decreased expression

Symbol Name Standardized Value
AREG amphiregulin -0.223061
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0941491
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0662605
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0635334
RPS2 ribosomal protein S2 -0.0624769
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0535958
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0515896
CPOX coproporphyrinogen oxidase -0.0514602
MMP12 matrix metallopeptidase 12 -0.0513427
CCNL1 cyclin L1 -0.0492963
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0472298
KDM3A lysine (K)-specific demethylase 3A -0.0470143
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0437355
ANKRD12 ankyrin repeat domain 12 -0.0427633
TXNRD1 thioredoxin reductase 1 -0.0413362
BIRC2 baculoviral IAP repeat containing 2 -0.0412275
FBXO11 F-box protein 11 -0.0409408
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0401176
BIRC6 baculoviral IAP repeat containing 6 -0.0394751
PUM2 pumilio RNA-binding family member 2 -0.0387868
TMEM41B transmembrane protein 41B -0.0382392
NKTR natural killer cell triggering receptor -0.0381552
MED13L mediator complex subunit 13-like -0.0381402
ZNF292 zinc finger protein 292 -0.0372827
RTN4 reticulon 4 -0.0369852
ATP5F1B ATP synthase F1 subunit beta -0.0366818
XPO1 exportin 1 -0.0351441
GOLGA4 golgin A4 -0.0338613
CEP192 centrosomal protein 192kDa -0.0336325
NCOR1 nuclear receptor corepressor 1 -0.0335626
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.033556
TNPO1 transportin 1 -0.0330689
NEK7 NIMA-related kinase 7 -0.032769
MGAT4C MGAT4 family, member C -0.0323285
YEATS2 YEATS domain containing 2 -0.0323134
ZBTB20 zinc finger and BTB domain containing 20 -0.0319988
RB1CC1 RB1-inducible coiled-coil 1 -0.031969
TAS2R14 taste receptor, type 2, member 14 -0.0319679
OGA O-GlcNAcase -0.0319124
THOC1 THO complex 1 -0.0314476
RPL38 ribosomal protein L38 -0.0313727
CEP95 centrosomal protein 95kDa -0.0306588
SETD5 SET domain containing 5 -0.030582
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0302865
CAMKMT calmodulin-lysine N-methyltransferase -0.0302458
PREPL prolyl endopeptidase-like -0.0298662
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0297539
FBXL20 F-box and leucine-rich repeat protein 20 -0.0296906
EPHA6 EPH receptor A6 -0.0296048
JMJD1C jumonji domain containing 1C -0.0292924
BCAS3 breast carcinoma amplified sequence 3 -0.0290134
EXOC6B exocyst complex component 6B -0.0285819
RPLP2 ribosomal protein, large, P2 -0.0284053
BRWD3 bromodomain and WD repeat domain containing 3 -0.0281612
CDK19 cyclin-dependent kinase 19 -0.0280933
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0280153
LRP6 low density lipoprotein receptor-related protein 6 -0.0276918
VMP1 vacuole membrane protein 1 -0.0276818
SPAG9 sperm associated antigen 9 -0.0275201
PNISR PNN-interacting serine/arginine-rich protein -0.0274808
RNF13 ring finger protein 13 -0.0274179
ADAM17 ADAM metallopeptidase domain 17 -0.0269609
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.026746
ANKRD36 ankyrin repeat domain 36 -0.0264659
PNN pinin, desmosome associated protein -0.0258647
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0257374
USP34 ubiquitin specific peptidase 34 -0.0254341
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0252789
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0252154
RPS29 ribosomal protein S29 -0.0251554
KLHL24 kelch-like family member 24 -0.0246796
PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha -0.0246574
NIPBL Nipped-B homolog (Drosophila) -0.0245324
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0240959
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0237185
THOC2 THO complex 2 -0.0236682
SLC49A4 solute carrier family 49 member 4 -0.023498
LCORL ligand dependent nuclear receptor corepressor-like -0.0234464
WNK1 WNK lysine deficient protein kinase 1 -0.023423
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0232181
HSPA4 heat shock 70kDa protein 4 -0.0231144
ATP11B ATPase, class VI, type 11B -0.0228234
CAMTA1 calmodulin binding transcription activator 1 -0.0228077
PDE4B phosphodiesterase 4B, cAMP-specific -0.0227662
RPS21 ribosomal protein S21 -0.0227629
KIF5B kinesin family member 5B -0.0226118
CXADR coxsackie virus and adenovirus receptor -0.0225027
RSF1 remodeling and spacing factor 1 -0.0224783
ARHGAP12 Rho GTPase activating protein 12 -0.0224203
CLTC clathrin, heavy chain (Hc) -0.0223729
RASA2 RAS p21 protein activator 2 -0.0222846
RBM39 RNA binding motif protein 39 -0.0222453
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0220842
NCOA1 nuclear receptor coactivator 1 -0.0219078
IL6ST interleukin 6 signal transducer -0.0217655
GRB2 growth factor receptor-bound protein 2 -0.021691
WDR41 WD repeat domain 41 -0.0214783
SBF2 SET binding factor 2 -0.0214289
KMT2E lysine (K)-specific methyltransferase 2E -0.0213612
ZNF207 zinc finger protein 207 -0.0213004