BI-3406_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-3406 perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-3406_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.24166
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.20479
EEF2 eukaryotic translation elongation factor 2 0.197054
TPM3 tropomyosin 3 0.106024
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0778713
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0654512
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0620351
RPL3 ribosomal protein L3 0.0598357
TXNRD1 thioredoxin reductase 1 0.0528364
GOLGB1 golgin B1 0.0505713
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.048155
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0480783
UBC ubiquitin C 0.0478103
ERRFI1 ERBB receptor feedback inhibitor 1 0.0472369
RACK1 receptor for activated C kinase 1 0.046311
HSPA8 heat shock 70kDa protein 8 0.0451548
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0432185
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0431658
STC1 stanniocalcin 1 0.043043
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0425293
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0423725
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0421167
PCBP2 poly(rC) binding protein 2 0.0412964
COPA coatomer protein complex, subunit alpha 0.0406301
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0401409
RPS4X ribosomal protein S4, X-linked 0.0400553
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0397809
YBX1 Y box binding protein 1 0.0382442
SRRM2 serine/arginine repetitive matrix 2 0.0380413
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0370356
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0358732
ZSWIM6 zinc finger, SWIM-type containing 6 0.034465
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0337811
RPL4 ribosomal protein L4 0.0337165
GOLGA4 golgin A4 0.033384
HOMER1 homer scaffolding protein 1 0.0333342
PDIA6 protein disulfide isomerase family A, member 6 0.032238
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0321037
PDE4D phosphodiesterase 4D, cAMP-specific 0.0316356
INTS6 integrator complex subunit 6 0.0301427
PRRC2A proline-rich coiled-coil 2A 0.0296068
TPI1 triosephosphate isomerase 1 0.0292495
ELL2 elongation factor, RNA polymerase II, 2 0.0287206
HDLBP high density lipoprotein binding protein 0.0282964
PTPN11 protein tyrosine phosphatase, non-receptor type 11 0.0281765
NCKAP1 NCK-associated protein 1 0.0276943
WNK1 WNK lysine deficient protein kinase 1 0.0274644
SFPQ splicing factor proline/glutamine-rich 0.0272391
PREPL prolyl endopeptidase-like 0.0270605
KTN1 kinectin 1 (kinesin receptor) 0.0269654
ADIPOR2 adiponectin receptor 2 0.0269612
TFPI2 tissue factor pathway inhibitor 2 0.026921
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0266335
ZFAND3 zinc finger, AN1-type domain 3 0.0266225
CRY1 cryptochrome circadian clock 1 0.0266044
CCT2 chaperonin containing TCP1, subunit 2 (beta) 0.0265645
RPS2 ribosomal protein S2 0.025502
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0254132
RPS27 ribosomal protein S27 0.0251542
RPS17 ribosomal protein S17 0.0250444
ACTN1 actinin, alpha 1 0.0248976
SPRED2 sprouty-related, EVH1 domain containing 2 0.0248765
SRP54 signal recognition particle 54kDa 0.0247304
UBAP2L ubiquitin associated protein 2-like 0.024504
KMT5B lysine methyltransferase 5B 0.0242175
LOC112694756 uncharaterized LOC112694756 0.0241851
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0239717
EEF1G eukaryotic translation elongation factor 1 gamma 0.0237541
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0235935
MCFD2 multiple coagulation factor deficiency 2 0.0234755
MYH9 myosin, heavy chain 9, non-muscle 0.023458
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0234569
RAB22A RAB22A, member RAS oncogene family 0.0234562
GARS1 glycyl-tRNA synthetase 1 0.0233664
RAB10 RAB10, member RAS oncogene family 0.0231758
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0231688
CALU calumenin 0.0231356
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0230879
MLEC malectin 0.0230733
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0229232
MYO6 myosin VI 0.0229146
R3HDM2 R3H domain containing 2 0.0228253
MORF4L2 mortality factor 4 like 2 0.0227001
ADAR adenosine deaminase, RNA-specific 0.0225826
STK4 serine/threonine kinase 4 0.0225645
SERINC3 serine incorporator 3 0.0223679
TMEM41B transmembrane protein 41B 0.0223636
CLTC clathrin, heavy chain (Hc) 0.0222719
IL6ST interleukin 6 signal transducer 0.0222074
RAB1A RAB1A, member RAS oncogene family 0.022187
KIF5B kinesin family member 5B 0.0219474
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0219151
TAPBP TAP binding protein (tapasin) 0.0218614
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0218318
BRD2 bromodomain containing 2 0.0217439
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.021721
CCT7 chaperonin containing TCP1, subunit 7 (eta) 0.0216784
MKRN1 makorin ring finger protein 1 0.0215665
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.021456
CSDE1 cold shock domain containing E1, RNA-binding 0.0208739

decreased expression

Symbol Name Standardized Value
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.156972
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.140672
RAD51B RAD51 paralog B -0.0991623
TMSB10 thymosin beta 10 -0.0899689
RIMS2 regulating synaptic membrane exocytosis 2 -0.086135
YBX3 Y box binding protein 3 -0.0848796
PTMA prothymosin, alpha -0.0824158
PRELID2 PRELI domain containing 2 -0.0803522
ERC1 ELKS/RAB6-interacting/CAST family member 1 -0.0736218
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0734103
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0690386
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0682053
TAS2R14 taste receptor, type 2, member 14 -0.0665439
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.064919
ACTG1 actin gamma 1 -0.0622762
ATXN1 ataxin 1 -0.0620125
RPS21 ribosomal protein S21 -0.061716
EXOC4 exocyst complex component 4 -0.0612013
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0557675
IGF1R insulin-like growth factor 1 receptor -0.0508547
RPL35A ribosomal protein L35a -0.0495964
EML4 echinoderm microtubule associated protein like 4 -0.049477
SBF2 SET binding factor 2 -0.0493516
TM4SF1 transmembrane 4 L six family member 1 -0.0464341
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0463599
RYR3 ryanodine receptor 3 -0.0458964
PTK2 protein tyrosine kinase 2 -0.0450758
NCOA7 nuclear receptor coactivator 7 -0.0450563
SSH2 slingshot protein phosphatase 2 -0.0447405
CD2AP CD2-associated protein -0.0446146
HLA-B major histocompatibility complex, class I, B -0.0437398
OSMR oncostatin M receptor -0.0433501
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0429721
BASP1 brain abundant, membrane attached signal protein 1 -0.0419506
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0408612
TPT1 tumor protein, translationally-controlled 1 -0.0406976
EFNA5 ephrin-A5 -0.0406691
DNAH14 dynein, axonemal, heavy chain 14 -0.0394278
USP34 ubiquitin specific peptidase 34 -0.0390516
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0386988
MYL12B myosin, light chain 12B, regulatory -0.0386258
WDPCP WD repeat containing planar cell polarity effector -0.0384958
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0377002
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0369752
NLGN1 neuroligin 1 -0.0366583
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0364235
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0358981
SDK1 sidekick cell adhesion molecule 1 -0.0357262
CUX1 cut-like homeobox 1 -0.0356833
PHF21A PHD finger protein 21A -0.0354344
HMGA2 high mobility group AT-hook 2 -0.0347954
PHIP pleckstrin homology domain interacting protein -0.034769
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0343873
BBX bobby sox homolog (Drosophila) -0.0340997
ITSN1 intersectin 1 (SH3 domain protein) -0.0332416
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0332288
MT1X metallothionein 1X -0.0328847
DENND5B DENN/MADD domain containing 5B -0.0322576
CCDC91 coiled-coil domain containing 91 -0.0321655
THOC2 THO complex 2 -0.0320888
RSF1 remodeling and spacing factor 1 -0.03155
WSB1 WD repeat and SOCS box containing 1 -0.0309846
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0309221
ZMYND8 zinc finger, MYND-type containing 8 -0.0307291
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0307243
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0306182
PDE10A phosphodiesterase 10A -0.0304081
SMC4 structural maintenance of chromosomes 4 -0.0291435
DIAPH3 diaphanous-related formin 3 -0.0289104
TBC1D5 TBC1 domain family, member 5 -0.0287532
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0287244
EHBP1 EH domain binding protein 1 -0.0284709
TBC1D22A TBC1 domain family, member 22A -0.0282976
DIAPH2 diaphanous-related formin 2 -0.028243
NABP1 nucleic acid binding protein 1 -0.0280343
MAP4 microtubule-associated protein 4 -0.0280288
DCUN1D4 DCN1, defective in cullin neddylation 1, domain containing 4 -0.0275083
ZNF638 zinc finger protein 638 -0.0274275
BNC2 basonuclin 2 -0.0273112
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0272631
ZMYM2 zinc finger, MYM-type 2 -0.0269779
ANKRD36B ankyrin repeat domain 36B -0.0269308
RBM39 RNA binding motif protein 39 -0.0266356
ZBTB20 zinc finger and BTB domain containing 20 -0.0266262
RPTOR regulatory associated protein of MTOR, complex 1 -0.026473
SUMF1 sulfatase modifying factor 1 -0.0262553
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0262334
LPP LIM domain containing preferred translocation partner in lipoma -0.0261996
ANKRD12 ankyrin repeat domain 12 -0.0255241
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0255014
PHF20 PHD finger protein 20 -0.0253431
SMYD3 SET and MYND domain containing 3 -0.0251115
BIRC6 baculoviral IAP repeat containing 6 -0.0250344
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0246548
CNKSR3 CNKSR family member 3 -0.0244747
SAMD4A sterile alpha motif domain containing 4A -0.0242024
NCOR1 nuclear receptor corepressor 1 -0.0241127
SPIDR scaffolding protein involved in DNA repair -0.0237542
RBMX RNA binding motif protein, X-linked -0.0236962
FMN1 formin 1 -0.0236505