BI-78D3_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-78D3_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.0512993
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0477985
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0342715
HDAC9 histone deacetylase 9 0.0305479
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0303875
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0285685
LDHA lactate dehydrogenase A 0.0285229
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0262801
NAV2 neuron navigator 2 0.0228714
FNDC3B fibronectin type III domain containing 3B 0.0220286
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0215713
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0212553
RHOBTB3 Rho-related BTB domain containing 3 0.0210262
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0206794
CENPF centromere protein F, 350/400kDa 0.0193296
TPM3 tropomyosin 3 0.0192221
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0191754
SQSTM1 sequestosome 1 0.0191636
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0183518
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0179272
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0178208
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0177899
CD44 CD44 molecule (Indian blood group) 0.0177302
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0174464
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0174084
RUNX1 runt-related transcription factor 1 0.0173967
MAP1B microtubule-associated protein 1B 0.0173599
CDH13 cadherin 13 0.0166242
ASPH aspartate beta-hydroxylase 0.016535
MYOF myoferlin 0.0164349
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0156913
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0156381
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0154688
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0152876
AFF4 AF4/FMR2 family, member 4 0.0148121
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0146831
PDIA3 protein disulfide isomerase family A, member 3 0.0145066
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0143462
MSN moesin 0.0142134
B2M beta-2-microglobulin 0.0139908
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0138981
ELL2 elongation factor, RNA polymerase II, 2 0.0137963
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0135204
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0131116
CANX calnexin 0.0130407
PCBP2 poly(rC) binding protein 2 0.0128917
DSPP dentin sialophosphoprotein 0.0126027
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0126006
RTN4 reticulon 4 0.0125861
ANXA2 annexin A2 0.0125686
LOC112694756 uncharaterized LOC112694756 0.0124985
TPM4 tropomyosin 4 0.0124635
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0123226
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0118769
ZNF292 zinc finger protein 292 0.0118138
SLC39A11 solute carrier family 39, member 11 0.0118028
XPO1 exportin 1 0.0117502
MACF1 microtubule-actin crosslinking factor 1 0.0116341
ERBIN erbb2 interacting protein 0.0116313
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0115835
GOLGA4 golgin A4 0.0113905
MYH9 myosin, heavy chain 9, non-muscle 0.011318
POTEF POTE ankyrin domain family, member F 0.0111813
PKM pyruvate kinase, muscle 0.0111519
PBX3 pre-B-cell leukemia homeobox 3 0.0111153
EEF2 eukaryotic translation elongation factor 2 0.0111115
FNIP1 folliculin interacting protein 1 0.0110661
ENO1 enolase 1, (alpha) 0.0110058
ADAM9 ADAM metallopeptidase domain 9 0.0109903
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0109309
PTK2 protein tyrosine kinase 2 0.0109247
SUCO SUN domain containing ossification factor 0.0106922
GLS2 glutaminase 2 (liver, mitochondrial) 0.0105877
ANXA5 annexin A5 0.0105741
EGFR epidermal growth factor receptor 0.01052
KLF7 Kruppel-like factor 7 (ubiquitous) 0.010328
ZSWIM6 zinc finger, SWIM-type containing 6 0.0102814
TAOK1 TAO kinase 1 0.010268
FSTL1 follistatin-like 1 0.0102486
ANO6 anoctamin 6 0.010248
TNIP1 TNFAIP3 interacting protein 1 0.0100759
PICALM phosphatidylinositol binding clathrin assembly protein 0.00996731
CDK6 cyclin-dependent kinase 6 0.00988524
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.00986306
IL6ST interleukin 6 signal transducer 0.00982494
SET SET nuclear proto-oncogene 0.00980654
FLNB filamin B, beta 0.00979823
RND3 Rho family GTPase 3 0.00976432
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.00973578
MBNL2 muscleblind-like splicing regulator 2 0.00973263
DST dystonin 0.00963441
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.00953859
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0094681
TMSB4X thymosin beta 4, X-linked 0.00945234
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.00931504
JUN jun proto-oncogene 0.00917479
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.00909032
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.00900061
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0089393
HELZ helicase with zinc finger 0.00892184

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.068604
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0677957
VIM vimentin -0.0579881
PLAT plasminogen activator, tissue -0.0541403
TMSB10 thymosin beta 10 -0.0421653
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0345904
HLA-B major histocompatibility complex, class I, B -0.0334335
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0274237
COL8A1 collagen, type VIII, alpha 1 -0.0247098
LMNA lamin A/C -0.0246395
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0241387
FBN1 fibrillin 1 -0.023779
NDRG1 N-myc downstream regulated 1 -0.0193492
LOX lysyl oxidase -0.0180679
COL5A1 collagen, type V, alpha 1 -0.0171406
COL1A2 collagen, type I, alpha 2 -0.0170372
TPT1 tumor protein, translationally-controlled 1 -0.0164966
ZBTB20 zinc finger and BTB domain containing 20 -0.0163504
CAVIN1 caveolae associated protein 1 -0.0159799
HLA-C major histocompatibility complex, class I, C -0.014525
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.014481
ABI3BP ABI family, member 3 (NESH) binding protein -0.0141831
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0130744
THBS2 thrombospondin 2 -0.0126097
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0122167
FN1 fibronectin 1 -0.0114751
MX2 MX dynamin-like GTPase 2 -0.011265
PRSS23 protease, serine, 23 -0.0111238
LOXL2 lysyl oxidase-like 2 -0.0110632
PODXL podocalyxin-like -0.0107457
IFITM1 interferon induced transmembrane protein 1 -0.0105508
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.00994329
MRPS6 mitochondrial ribosomal protein S6 -0.00932014
COL1A1 collagen, type I, alpha 1 -0.00891941
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.00886434
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.00837876
SUCNR1 succinate receptor 1 -0.00777408
IFITM3 interferon induced transmembrane protein 3 -0.00774715
ARL4C ADP-ribosylation factor-like 4C -0.00772206
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.00771474
S100A11 S100 calcium binding protein A11 -0.00770865
NAV1 neuron navigator 1 -0.00769097
PSD3 pleckstrin and Sec7 domain containing 3 -0.00768457
PXDN peroxidasin -0.00761892
MT1X metallothionein 1X -0.00743097
CTSB cathepsin B -0.00737928
PRRX1 paired related homeobox 1 -0.00728127
JAZF1 JAZF zinc finger 1 -0.00722667
KRT81 keratin 81, type II -0.00709051
TM4SF1 transmembrane 4 L six family member 1 -0.00706288
EHBP1 EH domain binding protein 1 -0.00705293
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.00705246
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.00673191
HSPB1 heat shock 27kDa protein 1 -0.00671293
COL6A1 collagen, type VI, alpha 1 -0.00652451
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.00649557
ARL15 ADP-ribosylation factor-like 15 -0.00647332
DKK3 dickkopf WNT signaling pathway inhibitor 3 -0.00643899
IFI6 interferon, alpha-inducible protein 6 -0.00629347
WARS1 tryptophanyl-tRNA synthetase 1 -0.00628668
HLA-E major histocompatibility complex, class I, E -0.00624173
MRC2 mannose receptor, C type 2 -0.0062318
PTMA prothymosin, alpha -0.00620984
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 -0.00612456
MARCKS myristoylated alanine-rich protein kinase C substrate -0.00604677
GOLGA2 golgin A2 -0.00600226
LINGO2 leucine rich repeat and Ig domain containing 2 -0.00596543
FRMD4A FERM domain containing 4A -0.00576244
ENO2 enolase 2 (gamma, neuronal) -0.00573714
FTL ferritin, light polypeptide -0.00559383
MEIS2 Meis homeobox 2 -0.00557092
CD81 CD81 molecule -0.00556117
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.00555382
AKAP12 A kinase (PRKA) anchor protein 12 -0.00549223
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.00544596
SOD2 superoxide dismutase 2, mitochondrial -0.00544186
RNF213 ring finger protein 213 -0.00537663
RPL35A ribosomal protein L35a -0.00534501
HLA-A major histocompatibility complex, class I, A -0.00530315
INTS6 integrator complex subunit 6 -0.00530101
FRMD5 FERM domain containing 5 -0.00524054
TPM1 tropomyosin 1 (alpha) -0.00523719
IFIH1 interferon induced with helicase C domain 1 -0.00523039
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.00512637
COL18A1 collagen, type XVIII, alpha 1 -0.00511877
CCM2 cerebral cavernous malformation 2 -0.00509454
SEC61G Sec61 gamma subunit -0.00485105
ZBTB7A zinc finger and BTB domain containing 7A -0.00483062
MXRA5 matrix-remodelling associated 5 -0.00482434
RRBP1 ribosome binding protein 1 -0.00481921
PTPRF protein tyrosine phosphatase, receptor type, F -0.00478557
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.00474939
MYADM myeloid-associated differentiation marker -0.00474917
CDK12 cyclin-dependent kinase 12 -0.00471699
CEP112 centrosomal protein 112kDa -0.00471287
COL6A2 collagen, type VI, alpha 2 -0.00465483
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0046274
EDF1 endothelial differentiation-related factor 1 -0.00456331
GCC2 GRIP and coiled-coil domain containing 2 -0.0045558
THY1 Thy-1 cell surface antigen -0.00451669