BI-78D3_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-78D3_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.171155
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0856904
NLGN1 neuroligin 1 0.0826203
HMGA2 high mobility group AT-hook 2 0.078876
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0782578
EHBP1 EH domain binding protein 1 0.0748451
RAB7A RAB7A, member RAS oncogene family 0.0648022
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.06253
PCDH7 protocadherin 7 0.0607135
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0570838
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0549476
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0531526
EGR1 early growth response 1 0.0444243
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0440721
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0392743
NHSL1 NHS-like 1 0.0392077
MMP12 matrix metallopeptidase 12 0.0385924
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0373553
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.037344
ZSWIM6 zinc finger, SWIM-type containing 6 0.0370488
YAP1 Yes-associated protein 1 0.0370107
RASAL2 RAS protein activator like 2 0.0355018
ADIPOR2 adiponectin receptor 2 0.0345706
JMJD1C jumonji domain containing 1C 0.03219
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0313712
DPYD dihydropyrimidine dehydrogenase 0.0309276
ASPH aspartate beta-hydroxylase 0.0307782
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0305679
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0303174
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0299596
DDIT3 DNA-damage-inducible transcript 3 0.0288079
USP34 ubiquitin specific peptidase 34 0.0284001
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0277513
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0276189
EPHA5 EPH receptor A5 0.0276028
SIK3 SIK family kinase 3 0.0273634
NECTIN3 nectin cell adhesion molecule 3 0.027299
AFF4 AF4/FMR2 family, member 4 0.0265539
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0263733
INTS6 integrator complex subunit 6 0.0263396
AKAP12 A kinase (PRKA) anchor protein 12 0.0261165
NEBL nebulette 0.0260099
VMP1 vacuole membrane protein 1 0.0258964
EGFR epidermal growth factor receptor 0.0251155
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0249759
PCDH9 protocadherin 9 0.024847
TENM3 teneurin transmembrane protein 3 0.0245806
LOC102724023 ES1 protein homolog, mitochondrial 0.0243794
RAB10 RAB10, member RAS oncogene family 0.0242468
NABP1 nucleic acid binding protein 1 0.0240868
TAS2R14 taste receptor, type 2, member 14 0.0240686
SETX senataxin 0.0238454
ZNF407 zinc finger protein 407 0.0237005
RABGAP1L RAB GTPase activating protein 1-like 0.0236218
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0234634
LPP LIM domain containing preferred translocation partner in lipoma 0.0234575
CMIP c-Maf inducing protein 0.0230101
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0227977
DST dystonin 0.0224452
HDAC9 histone deacetylase 9 0.022218
NEGR1 neuronal growth regulator 1 0.0214621
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0214503
ZEB1 zinc finger E-box binding homeobox 1 0.0212933
SON SON DNA binding protein 0.0211504
PRKCE protein kinase C, epsilon 0.0211346
RACK1 receptor for activated C kinase 1 0.0211196
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0209566
MACF1 microtubule-actin crosslinking factor 1 0.0209158
IPO7 importin 7 0.0206479
ZNF804A zinc finger protein 804A 0.0206076
ANKRD17 ankyrin repeat domain 17 0.0205037
ASXL2 additional sex combs like transcriptional regulator 2 0.0202207
DTNA dystrobrevin, alpha 0.0202165
PDGFC platelet derived growth factor C 0.0201865
BABAM2 BRISC and BRCA1 A complex member 2 0.020143
L3MBTL4 l(3)mbt-like 4 (Drosophila) 0.0199579
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0199557
FNIP1 folliculin interacting protein 1 0.0199214
RPLP0 ribosomal protein, large, P0 0.0198866
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0198808
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.019847
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0195161
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0194588
TTC27 tetratricopeptide repeat domain 27 0.0194551
UTRN utrophin 0.0193021
C6ORF62 chromosome 6 open reading frame 62 0.0190716
SLC38A1 solute carrier family 38, member 1 0.019036
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0189748
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0189275
MSRB3 methionine sulfoxide reductase B3 0.0188592
KDM2A lysine (K)-specific demethylase 2A 0.018828
TPI1 triosephosphate isomerase 1 0.0186985
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0186004
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0184784
ZBTB20 zinc finger and BTB domain containing 20 0.0181719
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.017548
CLTC clathrin, heavy chain (Hc) 0.0173618
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0172673
PACS1 phosphofurin acidic cluster sorting protein 1 0.0171483
CREM cAMP responsive element modulator 0.0170335

decreased expression

Symbol Name Standardized Value
AREG amphiregulin -0.179544
RPS27A ribosomal protein S27a -0.0617972
VIM vimentin -0.0585522
PTMA prothymosin, alpha -0.0510892
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0482169
SMC4 structural maintenance of chromosomes 4 -0.0476997
KDM3A lysine (K)-specific demethylase 3A -0.044551
UBC ubiquitin C -0.0429826
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0418381
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0415773
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0398652
ADGRG6 adhesion G protein-coupled receptor G6 -0.0390009
AHNAK AHNAK nucleoprotein -0.036911
OGA O-GlcNAcase -0.0364266
PDE4D phosphodiesterase 4D, cAMP-specific -0.0326927
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0323947
RRM2 ribonucleotide reductase M2 -0.0314691
TPT1 tumor protein, translationally-controlled 1 -0.0313264
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.02898
MYL12B myosin, light chain 12B, regulatory -0.0285308
H1-0 H1.0 linker histone -0.0280366
SLC38A2 solute carrier family 38, member 2 -0.0279467
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0270812
ZNF217 zinc finger protein 217 -0.0265101
YBX1 Y box binding protein 1 -0.0263616
YBX3 Y box binding protein 3 -0.0262251
TPR translocated promoter region, nuclear basket protein -0.0258054
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0257314
NAP1L1 nucleosome assembly protein 1-like 1 -0.0256559
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 -0.025502
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0254173
RAD21 RAD21 homolog (S. pombe) -0.0249678
MIS18BP1 MIS18 binding protein 1 -0.0241163
RPL38 ribosomal protein L38 -0.0240722
MKI67 marker of proliferation Ki-67 -0.0239297
PNISR PNN-interacting serine/arginine-rich protein -0.0236961
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0236376
IFIH1 interferon induced with helicase C domain 1 -0.0236302
CXADR coxsackie virus and adenovirus receptor -0.0234831
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0229313
CPOX coproporphyrinogen oxidase -0.0228144
HMGB1 high mobility group box 1 -0.0227496
PRR11 proline rich 11 -0.0226991
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0211347
OXR1 oxidation resistance 1 -0.0210881
CENPF centromere protein F, 350/400kDa -0.0210363
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0206174
RBM25 RNA binding motif protein 25 -0.0203976
MED13L mediator complex subunit 13-like -0.0199947
NDUFV2 NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa -0.0198946
HMGB2 high mobility group box 2 -0.0196936
ATP5F1B ATP synthase F1 subunit beta -0.0196701
FTL ferritin, light polypeptide -0.0194291
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0194068
XPO1 exportin 1 -0.0192864
CLPTM1L CLPTM1-like -0.0191841
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0191645
CENPE centromere protein E, 312kDa -0.0191537
BIRC2 baculoviral IAP repeat containing 2 -0.0189886
NPEPPS aminopeptidase puromycin sensitive -0.0189557
QKI QKI, KH domain containing, RNA binding -0.0189103
NEK7 NIMA-related kinase 7 -0.0188815
CAVIN1 caveolae associated protein 1 -0.0188109
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0186537
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0184544
DEK DEK proto-oncogene -0.0184444
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0179123
RPS24 ribosomal protein S24 -0.0178179
PCNP PEST proteolytic signal containing nuclear protein -0.0173866
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0172104
CDCA2 cell division cycle associated 2 -0.0170333
KIF4A kinesin family member 4A -0.0169803
TPX2 TPX2, microtubule-associated -0.016728
EEF2 eukaryotic translation elongation factor 2 -0.0165464
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0165444
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0163724
RPL19 ribosomal protein L19 -0.0163156
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0162035
FUS FUS RNA binding protein -0.0161755
VCL vinculin -0.0160777
NEMF nuclear export mediator factor -0.0160084
ECT2 epithelial cell transforming 2 -0.0160017
GMPS guanine monphosphate synthase -0.0159632
AFG3L2 AFG3-like AAA ATPase 2 -0.0156842
IL6ST interleukin 6 signal transducer -0.0156625
KIF5B kinesin family member 5B -0.0155583
ANKRD36 ankyrin repeat domain 36 -0.0153982
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0153224
DDB2 damage-specific DNA binding protein 2, 48kDa -0.0153193
SRSF7 serine/arginine-rich splicing factor 7 -0.0152516
CDC27 cell division cycle 27 -0.0152202
MARCHF6 membrane associated ring-CH-type finger 6 -0.0151719
VDAC1 voltage-dependent anion channel 1 -0.0151502
STAG2 stromal antigen 2 -0.0150846
MARS1 methionyl-tRNA synthetase 1 -0.0150825
WNK1 WNK lysine deficient protein kinase 1 -0.0150479
TUBB6 tubulin, beta 6 class V -0.0149549
SET SET nuclear proto-oncogene -0.0149075
NCOR1 nuclear receptor corepressor 1 -0.0145448
PAXBP1 PAX3 and PAX7 binding protein 1 -0.0144237