BI-78D3_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in CHP-212 cell line (Tahoe Therapeutics)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the BI-78D3_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.0777965
TRIO trio Rho guanine nucleotide exchange factor 0.0707573
VCL vinculin 0.0625233
FMN1 formin 1 0.0587559
DPH6 diphthamine biosynthesis 6 0.0519541
TLE4 transducin-like enhancer of split 4 0.0488982
ASCC3 activating signal cointegrator 1 complex subunit 3 0.045882
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0446423
ZSWIM6 zinc finger, SWIM-type containing 6 0.0424725
FNDC3B fibronectin type III domain containing 3B 0.0412028
UNC5C unc-5 homolog C (C. elegans) 0.0393579
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0387344
TIMP3 TIMP metallopeptidase inhibitor 3 0.0385547
PTPRD protein tyrosine phosphatase, receptor type, D 0.0379667
CEMIP cell migration inducing protein, hyaluronan binding 0.0345402
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.033147
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0329589
ANTXR1 anthrax toxin receptor 1 0.0315278
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0313826
FRMD4A FERM domain containing 4A 0.0310377
DST dystonin 0.0307462
RPS12 ribosomal protein S12 0.0298375
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0296206
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0294468
NREP neuronal regeneration related protein 0.0290764
RPS3 ribosomal protein S3 0.0286974
MBD5 methyl-CpG binding domain protein 5 0.0286377
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0270624
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A 0.026835
MYO9A myosin IXA 0.0265786
VCAN versican 0.0252558
MBNL2 muscleblind-like splicing regulator 2 0.0246127
ZBTB20 zinc finger and BTB domain containing 20 0.0245837
PLPP1 phospholipid phosphatase 1 0.0242707
MAP1B microtubule-associated protein 1B 0.0241843
NRG1 neuregulin 1 0.0240009
PRKCA protein kinase C, alpha 0.0239366
GSE1 Gse1 coiled-coil protein 0.0237852
RPS6 ribosomal protein S6 0.0236301
KMT2E lysine (K)-specific methyltransferase 2E 0.0235797
ZNF395 zinc finger protein 395 0.0234981
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0234396
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 0.0230226
SP100 SP100 nuclear antigen 0.0229688
PTEN phosphatase and tensin homolog 0.0229383
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0228548
SLIT2 slit homolog 2 (Drosophila) 0.0228166
ENAH enabled homolog (Drosophila) 0.0225453
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0223261
IGFBP3 insulin-like growth factor binding protein 3 0.0219399
TPM1 tropomyosin 1 (alpha) 0.0218285
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0216368
PCDH9 protocadherin 9 0.0214597
GATAD2B GATA zinc finger domain containing 2B 0.0213601
MYO1E myosin IE 0.0212965
SMYD3 SET and MYND domain containing 3 0.0208907
STXBP4 syntaxin binding protein 4 0.0207646
SYT1 synaptotagmin I 0.0206939
FERMT2 fermitin family member 2 0.0206428
LINGO2 leucine rich repeat and Ig domain containing 2 0.020592
PTPRM protein tyrosine phosphatase, receptor type, M 0.0205206
XRN1 5'-3' exoribonuclease 1 0.0205141
RPLP0 ribosomal protein, large, P0 0.0205094
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0204969
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0204134
NDRG1 N-myc downstream regulated 1 0.0202571
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0201429
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0201326
RPL31 ribosomal protein L31 0.0200758
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0199343
RAP1B RAP1B, member of RAS oncogene family 0.0199145
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0198357
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0197009
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0196885
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0194725
PPP1R13B protein phosphatase 1, regulatory subunit 13B 0.0194101
CEMIP2 cell migration inducing hyaluronidase 2 0.0191703
DNAH14 dynein, axonemal, heavy chain 14 0.0190886
GREM2 gremlin 2, DAN family BMP antagonist 0.0190481
HDX highly divergent homeobox 0.018955
GPBP1 GC-rich promoter binding protein 1 0.0189396
LSAMP limbic system-associated membrane protein 0.0187706
RPTOR regulatory associated protein of MTOR, complex 1 0.018714
TOP1 topoisomerase (DNA) I 0.0185464
VMP1 vacuole membrane protein 1 0.018502
NALF1 NALCN channel auxiliary factor 1 0.0184314
NPAS2 neuronal PAS domain protein 2 0.0183605
SNX13 sorting nexin 13 0.0182662
FLT1 fms-related tyrosine kinase 1 0.0182571
RPS27 ribosomal protein S27 0.0178879
PCDH15 protocadherin-related 15 0.0177618
BICD1 bicaudal D homolog 1 (Drosophila) 0.0176538
PANK3 pantothenate kinase 3 0.0175949
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0174282
LPP LIM domain containing preferred translocation partner in lipoma 0.0172819
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0172192
MYO6 myosin VI 0.0169602
PALLD palladin, cytoskeletal associated protein 0.016945
MCL1 myeloid cell leukemia 1 0.0169391
GMDS GDP-mannose 4,6-dehydratase 0.0168327

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.235799
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.172445
COL1A1 collagen, type I, alpha 1 -0.0896979
PTMA prothymosin, alpha -0.08866
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0614634
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0479599
COL3A1 collagen, type III, alpha 1 -0.0418678
CRH corticotropin releasing hormone -0.0380334
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0363257
ACTG1 actin gamma 1 -0.0356128
RPS24 ribosomal protein S24 -0.0355791
RPS27A ribosomal protein S27a -0.0341934
VIM vimentin -0.0340043
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0317275
UBC ubiquitin C -0.0307735
RAD21 RAD21 homolog (S. pombe) -0.0297769
RBMX RNA binding motif protein, X-linked -0.0297244
HMGB2 high mobility group box 2 -0.0294183
CENPF centromere protein F, 350/400kDa -0.0283859
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0278726
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog -0.0274702
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0268126
AHNAK AHNAK nucleoprotein -0.0263924
PARD3 par-3 family cell polarity regulator -0.0257417
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0255301
RPL35A ribosomal protein L35a -0.0250691
TMSB10 thymosin beta 10 -0.0248098
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0246366
PLAT plasminogen activator, tissue -0.0245422
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0245303
H3-3B H3.3 histone B -0.0235789
PRRC2C proline-rich coiled-coil 2C -0.023481
HMGB1 high mobility group box 1 -0.0233229
LMNA lamin A/C -0.0231212
TRIB2 tribbles pseudokinase 2 -0.0223846
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0222797
MKI67 marker of proliferation Ki-67 -0.0219516
RSL1D1 ribosomal L1 domain containing 1 -0.0216255
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 -0.0215243
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0214138
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.021316
NUP214 nucleoporin 214kDa -0.0211153
GNAS GNAS complex locus -0.0208888
MED13L mediator complex subunit 13-like -0.0207017
PTPRG protein tyrosine phosphatase, receptor type, G -0.0204006
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0203577
NCOR1 nuclear receptor corepressor 1 -0.0203147
SCG2 secretogranin II -0.0201995
CDH13 cadherin 13 -0.0201597
CCND1 cyclin D1 -0.0200996
SEPTIN2 septin 2 -0.0199748
MED13 mediator complex subunit 13 -0.0199087
NIPBL Nipped-B homolog (Drosophila) -0.0196544
ZFC3H1 zinc finger, C3H1-type containing -0.0195581
S100A9 S100 calcium binding protein A9 -0.0192714
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0191567
USP34 ubiquitin specific peptidase 34 -0.0190894
RHEB Ras homolog enriched in brain -0.0190665
HLA-B major histocompatibility complex, class I, B -0.0188808
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) -0.0187545
ZNF292 zinc finger protein 292 -0.0185893
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0184608
LMAN1 lectin, mannose-binding, 1 -0.0184466
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae) -0.0181329
FUS FUS RNA binding protein -0.0181163
MORF4L2 mortality factor 4 like 2 -0.0180766
MDK midkine (neurite growth-promoting factor 2) -0.0179088
UBE3C ubiquitin protein ligase E3C -0.017843
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0176957
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0176216
NAP1L1 nucleosome assembly protein 1-like 1 -0.0175613
INHBA inhibin, beta A -0.0175562
ZNF609 zinc finger protein 609 -0.017397
ANXA2 annexin A2 -0.0173282
CDK12 cyclin-dependent kinase 12 -0.017307
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0172458
SRPK2 SRSF protein kinase 2 -0.0170492
MAP4 microtubule-associated protein 4 -0.0170126
CKAP5 cytoskeleton associated protein 5 -0.0169622
EIF3B eukaryotic translation initiation factor 3, subunit B -0.0168567
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0168222
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0165946
RPL26 ribosomal protein L26 -0.0164957
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 -0.016339
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0163361
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0163047
HELZ helicase with zinc finger -0.0161683
THOC2 THO complex 2 -0.0161422
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.016047
XRN2 5'-3' exoribonuclease 2 -0.0160155
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B -0.0159166
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0156648
PABPN1 poly(A) binding protein, nuclear 1 -0.0155851
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0155684
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme -0.0155581
FN1 fibronectin 1 -0.0155082
RPL34 ribosomal protein L34 -0.0154906
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0154641
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 -0.0153945
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.015392