BI-78D3_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-78D3_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.36118
AKAP12 A kinase (PRKA) anchor protein 12 0.241284
EHBP1 EH domain binding protein 1 0.0877676
IGFBP1 insulin-like growth factor binding protein 1 0.0722734
ASPH aspartate beta-hydroxylase 0.066843
PDLIM5 PDZ and LIM domain 5 0.0651088
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0644094
VCL vinculin 0.0615429
SAMD4A sterile alpha motif domain containing 4A 0.0568048
SVIL supervillin 0.0557308
DSPP dentin sialophosphoprotein 0.0555069
GPC6 glypican 6 0.0534026
MAML2 mastermind-like 2 (Drosophila) 0.0515434
FOXP1 forkhead box P1 0.0483997
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0474676
FAM107B family with sequence similarity 107, member B 0.0471555
JMJD1C jumonji domain containing 1C 0.0445398
PAWR PRKC, apoptosis, WT1, regulator 0.0444855
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0438536
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0430494
FRMD5 FERM domain containing 5 0.0429535
FN1 fibronectin 1 0.0408075
TRIO trio Rho guanine nucleotide exchange factor 0.0407165
ATXN1 ataxin 1 0.038897
NPAS2 neuronal PAS domain protein 2 0.0383908
LPP LIM domain containing preferred translocation partner in lipoma 0.0379603
DST dystonin 0.037324
TMSB10 thymosin beta 10 0.0368546
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0360748
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0358967
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0347062
DLC1 DLC1 Rho GTPase activating protein 0.0345541
ZBTB20 zinc finger and BTB domain containing 20 0.0344403
RASA2 RAS p21 protein activator 2 0.033572
KRT8 keratin 8, type II 0.033466
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0321327
RAI14 retinoic acid induced 14 0.031963
MYO1E myosin IE 0.031953
MBNL2 muscleblind-like splicing regulator 2 0.0313488
FAT1 FAT atypical cadherin 1 0.0310144
CRY1 cryptochrome circadian clock 1 0.0309722
ITGAV integrin, alpha V 0.0286671
RUNX1 runt-related transcription factor 1 0.0284024
SOX5 SRY (sex determining region Y)-box 5 0.0281482
ENO1 enolase 1, (alpha) 0.0277899
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0275085
GMDS GDP-mannose 4,6-dehydratase 0.0272613
AFF1 AF4/FMR2 family, member 1 0.0267563
CNKSR3 CNKSR family member 3 0.0264745
FLNB filamin B, beta 0.0264289
SLC38A2 solute carrier family 38, member 2 0.0263838
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.025837
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0258364
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0255464
GRB10 growth factor receptor-bound protein 10 0.0244893
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0244834
EXT1 exostosin glycosyltransferase 1 0.0243087
DSTN destrin (actin depolymerizing factor) 0.024083
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0229851
RAB3B RAB3B, member RAS oncogene family 0.0222102
FHL2 four and a half LIM domains 2 0.0221108
CADM1 cell adhesion molecule 1 0.0219963
RPS17 ribosomal protein S17 0.0215554
LIMS1 LIM and senescent cell antigen-like domains 1 0.0214873
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0212473
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0212302
TCIM transcriptional and immune response regulator 0.0210548
GCLC glutamate-cysteine ligase, catalytic subunit 0.0207845
MBNL1 muscleblind-like splicing regulator 1 0.0206201
TXNRD1 thioredoxin reductase 1 0.020372
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.020119
LMO7 LIM domain 7 0.0197937
EPS8 epidermal growth factor receptor pathway substrate 8 0.0197888
SYNE1 spectrin repeat containing, nuclear envelope 1 0.0195789
SPATS2L spermatogenesis associated, serine-rich 2-like 0.019285
GLIS3 GLIS family zinc finger 3 0.0192211
PALLD palladin, cytoskeletal associated protein 0.0190556
TNS1 tensin 1 0.0189264
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0189201
STK17A serine/threonine kinase 17a 0.0188785
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0187851
ZFAND3 zinc finger, AN1-type domain 3 0.0187097
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0187049
PLXDC2 plexin domain containing 2 0.01856
LDHA lactate dehydrogenase A 0.0182606
TPM4 tropomyosin 4 0.0179269
SMAD3 SMAD family member 3 0.0178246
SMYD3 SET and MYND domain containing 3 0.0177044
SP100 SP100 nuclear antigen 0.0176779
ENKUR enkurin, TRPC channel interacting protein 0.0175515
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0175264
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.017426
ITGA1 integrin, alpha 1 0.0174076
OSBPL10 oxysterol binding protein-like 10 0.0172918
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 0.0171858
TLE4 transducin-like enhancer of split 4 0.0171291
DOCK4 dedicator of cytokinesis 4 0.0170527
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0168742
FERMT1 fermitin family member 1 0.0167493
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.016683

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.413186
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.19889
APOB apolipoprotein B -0.144934
C3 complement component 3 -0.104527
FBF1 Fas (TNFRSF6) binding factor 1 -0.102452
MT2A metallothionein 2A -0.0696254
FTL ferritin, light polypeptide -0.0570261
TPT1 tumor protein, translationally-controlled 1 -0.0547017
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0523072
APOA2 apolipoprotein A-II -0.0470326
FNDC3B fibronectin type III domain containing 3B -0.0459238
GPC3 glypican 3 -0.0450998
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0420903
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0386168
A2M alpha-2-macroglobulin -0.034764
SDC4 syndecan 4 -0.0343727
DDIT4 DNA-damage-inducible transcript 4 -0.031756
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0307489
GOLGA4 golgin A4 -0.0302489
CPE carboxypeptidase E -0.0293341
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0279665
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.027908
RBM25 RNA binding motif protein 25 -0.0273415
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0263956
INSIG2 insulin induced gene 2 -0.0263346
ELL2 elongation factor, RNA polymerase II, 2 -0.0246637
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0241292
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.0240707
PDE8A phosphodiesterase 8A -0.0239607
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0235788
DHRS2 dehydrogenase/reductase (SDR family) member 2 -0.0234896
WDR45B WD repeat domain 45B -0.0234654
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.0228797
NDRG1 N-myc downstream regulated 1 -0.0223513
MT1X metallothionein 1X -0.0222741
RPLP0 ribosomal protein, large, P0 -0.0214981
RPL35A ribosomal protein L35a -0.0213693
HELZ helicase with zinc finger -0.0212407
FAM162A family with sequence similarity 162, member A -0.0211644
CFB complement factor B -0.0205599
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0203167
ANGPTL8 angiopoietin like 8 -0.0199158
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0194874
PDIA3 protein disulfide isomerase family A, member 3 -0.0194037
WSB1 WD repeat and SOCS box containing 1 -0.0190632
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0189156
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0187058
ZNF292 zinc finger protein 292 -0.0187024
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0185949
APOE apolipoprotein E -0.0184933
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0184089
CNOT8 CCR4-NOT transcription complex, subunit 8 -0.0182652
APOA1 apolipoprotein A-I -0.0180784
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0180326
FGG fibrinogen gamma chain -0.017885
PTBP3 polypyrimidine tract binding protein 3 -0.0178826
LRRC1 leucine rich repeat containing 1 -0.0178051
OGA O-GlcNAcase -0.0177246
PHIP pleckstrin homology domain interacting protein -0.0176749
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0176226
ICAM1 intercellular adhesion molecule 1 -0.0175154
BRWD1 bromodomain and WD repeat domain containing 1 -0.0173556
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0172449
GNAS GNAS complex locus -0.0172339
MED13L mediator complex subunit 13-like -0.017149
CALR calreticulin -0.017125
RAB6A RAB6A, member RAS oncogene family -0.0170918
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0170904
CCNL1 cyclin L1 -0.0167636
GLG1 golgi glycoprotein 1 -0.0167275
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 -0.0164793
FOXN3 forkhead box N3 -0.0164177
RPLP2 ribosomal protein, large, P2 -0.0163405
ZMYND8 zinc finger, MYND-type containing 8 -0.0161884
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 -0.0161657
CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 -0.0161308
PDPK1 3-phosphoinositide dependent protein kinase 1 -0.0160522
HLF hepatic leukemia factor -0.0159952
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0159825
SOS1 son of sevenless homolog 1 (Drosophila) -0.015967
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 -0.0159514
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0159508
MYO1B myosin IB -0.0158376
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0158102
H3-3B H3.3 histone B -0.0157009
RPS5 ribosomal protein S5 -0.0154788
NUP58 nucleoporin 58 -0.0153596
AMBP alpha-1-microglobulin/bikunin precursor -0.0152484
RPL27A ribosomal protein L27a -0.015195
KPNB1 karyopherin (importin) beta 1 -0.0149646
ARID3A AT rich interactive domain 3A (BRIGHT-like) -0.0147616
RDX radixin -0.014758
BPIFB2 BPI fold containing family B, member 2 -0.0147217
RPL32 ribosomal protein L32 -0.0147198
GDF15 growth differentiation factor 15 -0.0147047
CYB5R3 cytochrome b5 reductase 3 -0.0146861
ADM adrenomedullin -0.0145428
BRD4 bromodomain containing 4 -0.014464
YY1 YY1 transcription factor -0.0144376
YAP1 Yes-associated protein 1 -0.0144222