BI-78D3_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-78D3_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.156232
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.126171
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0815916
FAT1 FAT atypical cadherin 1 0.0691398
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.059358
RPL12 ribosomal protein L12 0.0564689
RPL18 ribosomal protein L18 0.0530321
DSPP dentin sialophosphoprotein 0.052365
LDHA lactate dehydrogenase A 0.0500306
EZR ezrin 0.0466056
RPS12 ribosomal protein S12 0.0449878
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0446143
RPLP0 ribosomal protein, large, P0 0.0442122
LOC102724023 ES1 protein homolog, mitochondrial 0.0413063
SOX9 SRY (sex determining region Y)-box 9 0.040921
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0393508
PDE4D phosphodiesterase 4D, cAMP-specific 0.0372671
AFF1 AF4/FMR2 family, member 1 0.0355341
LMO7 LIM domain 7 0.0354393
KLF6 Kruppel-like factor 6 0.0351837
B2M beta-2-microglobulin 0.0346598
EPCAM epithelial cell adhesion molecule 0.0344106
ASPH aspartate beta-hydroxylase 0.0335309
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0333981
RPS19 ribosomal protein S19 0.032902
RPL26 ribosomal protein L26 0.0308414
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0297907
RPS4X ribosomal protein S4, X-linked 0.0297778
KRT8 keratin 8, type II 0.0297164
FOXP1 forkhead box P1 0.0295079
AHNAK AHNAK nucleoprotein 0.0280292
RPL36 ribosomal protein L36 0.0273722
RPL32 ribosomal protein L32 0.0271947
SON SON DNA binding protein 0.0271946
LOC112694756 uncharaterized LOC112694756 0.0270283
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0269549
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0268132
ZNF292 zinc finger protein 292 0.0267825
PGK1 phosphoglycerate kinase 1 0.0263897
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0262286
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.025445
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0250569
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0246834
TGFBR3 transforming growth factor, beta receptor III 0.0245286
ANO6 anoctamin 6 0.0245079
ZFP36L2 ZFP36 ring finger protein-like 2 0.024168
DSG2 desmoglein 2 0.0236375
LGALS3 lectin, galactoside-binding, soluble, 3 0.022985
RPLP1 ribosomal protein, large, P1 0.0227463
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0225616
PTPRR protein tyrosine phosphatase, receptor type, R 0.0222711
PDZD8 PDZ domain containing 8 0.0221713
CBX3 chromobox homolog 3 0.0213687
CSDE1 cold shock domain containing E1, RNA-binding 0.0213028
MUC13 mucin 13, cell surface associated 0.021264
ARHGAP21 Rho GTPase activating protein 21 0.0211684
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0210979
EREG epiregulin 0.0210681
CLCN3 chloride channel, voltage-sensitive 3 0.020985
CADPS Ca++-dependent secretion activator 0.0209154
PRRC2C proline-rich coiled-coil 2C 0.0208137
SOX4 SRY (sex determining region Y)-box 4 0.0207656
YBX3 Y box binding protein 3 0.0203944
SHROOM3 shroom family member 3 0.0203465
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.020282
EMP1 epithelial membrane protein 1 0.0199344
TRPS1 trichorhinophalangeal syndrome I 0.019898
SAMD12 sterile alpha motif domain containing 12 0.0197879
KLF5 Kruppel-like factor 5 (intestinal) 0.0197414
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0196445
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0196187
TBC1D5 TBC1 domain family, member 5 0.0195536
TPI1 triosephosphate isomerase 1 0.0194098
SCARB2 scavenger receptor class B, member 2 0.018938
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0184525
ALCAM activated leukocyte cell adhesion molecule 0.018433
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0183559
PARD3B par-3 family cell polarity regulator beta 0.0183318
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) 0.0182482
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0182235
ANK3 ankyrin 3, node of Ranvier (ankyrin G) 0.0181596
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0180772
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0180687
CEMIP cell migration inducing protein, hyaluronan binding 0.0178738
LPP LIM domain containing preferred translocation partner in lipoma 0.0177745
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0177529
ERBIN erbb2 interacting protein 0.0175321
PHF3 PHD finger protein 3 0.0174883
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.0172223
RPL7 ribosomal protein L7 0.0170975
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.017076
TXNIP thioredoxin interacting protein 0.0170176
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0169801
RPL30 ribosomal protein L30 0.0169022
SPIDR scaffolding protein involved in DNA repair 0.0168868
MBNL1 muscleblind-like splicing regulator 1 0.0167504
RPL21 ribosomal protein L21 0.0166864
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0166291
PTBP3 polypyrimidine tract binding protein 3 0.0165461
USP6NL USP6 N-terminal like 0.0164898

decreased expression

Symbol Name Standardized Value
MUC6 mucin 6, oligomeric mucus/gel-forming -0.227085
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.202522
PTMA prothymosin, alpha -0.166978
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.157279
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0964891
NDRG1 N-myc downstream regulated 1 -0.0781234
ACTG1 actin gamma 1 -0.0779667
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0719741
TPM4 tropomyosin 4 -0.0644963
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0628342
RPL35A ribosomal protein L35a -0.0623874
NPSR1 neuropeptide S receptor 1 -0.0573646
VCL vinculin -0.0504786
S100P S100 calcium binding protein P -0.0494403
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0489132
AREG amphiregulin -0.047037
GOLGA4 golgin A4 -0.0470211
GMDS GDP-mannose 4,6-dehydratase -0.0440287
PDIA3 protein disulfide isomerase family A, member 3 -0.0435511
TNS4 tensin 4 -0.0431527
RPS29 ribosomal protein S29 -0.0425126
TPT1 tumor protein, translationally-controlled 1 -0.0423752
POTEF POTE ankyrin domain family, member F -0.0394254
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.039063
IER3 immediate early response 3 -0.038819
MUC5B mucin 5B, oligomeric mucus/gel-forming -0.0371479
FTH1 ferritin, heavy polypeptide 1 -0.0370466
AGR2 anterior gradient 2 -0.0352928
RAB1A RAB1A, member RAS oncogene family -0.0341705
MT2A metallothionein 2A -0.0339148
SETD5 SET domain containing 5 -0.0338784
HM13 histocompatibility (minor) 13 -0.0335845
BTBD9 BTB (POZ) domain containing 9 -0.0326578
EGR1 early growth response 1 -0.0323945
ATP5F1B ATP synthase F1 subunit beta -0.0323429
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0316913
IARS1 isoleucyl-tRNA synthetase 1 -0.0313654
RAB6A RAB6A, member RAS oncogene family -0.0313636
TFF1 trefoil factor 1 -0.0312195
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0307997
PNISR PNN-interacting serine/arginine-rich protein -0.03017
SEC31A SEC31 homolog A (S. cerevisiae) -0.0296845
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.029299
CALR calreticulin -0.0291786
RPS23 ribosomal protein S23 -0.0288871
FTL ferritin, light polypeptide -0.0288064
RPL13A ribosomal protein L13a -0.0286285
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0286023
TBC1D22A TBC1 domain family, member 22A -0.028319
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0278492
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0272841
TTC3 tetratricopeptide repeat domain 3 -0.0265079
PDIA6 protein disulfide isomerase family A, member 6 -0.0265053
MON2 MON2 homolog (S. cerevisiae) -0.0261226
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0261133
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0260099
AKAP9 A kinase (PRKA) anchor protein 9 -0.0255915
RPS13 ribosomal protein S13 -0.0254494
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0253782
VEGFA vascular endothelial growth factor A -0.0249906
UBC ubiquitin C -0.0244999
NUPR1 nuclear protein, transcriptional regulator, 1 -0.0243441
TFF3 trefoil factor 3 (intestinal) -0.0240067
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0239531
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0233233
MCTP2 multiple C2 domains, transmembrane 2 -0.0228244
RPL9 ribosomal protein L9 -0.0226186
BRD2 bromodomain containing 2 -0.0225844
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0222313
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0219385
RPS8 ribosomal protein S8 -0.0216323
RCOR1 REST corepressor 1 -0.0216055
DNM2 dynamin 2 -0.0215819
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0213953
NUCB2 nucleobindin 2 -0.0213802
NKTR natural killer cell triggering receptor -0.0210071
SEC24D SEC24 family member D -0.0208779
COG5 component of oligomeric golgi complex 5 -0.0208193
RPL31 ribosomal protein L31 -0.0208115
GDF15 growth differentiation factor 15 -0.020803
TMEM41B transmembrane protein 41B -0.0207769
FBXO11 F-box protein 11 -0.0206759
FDPS farnesyl diphosphate synthase -0.0206031
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0205586
HILPDA hypoxia inducible lipid droplet-associated -0.0205442
CYB5R3 cytochrome b5 reductase 3 -0.020505
ITGB4 integrin, beta 4 -0.020333
WSB1 WD repeat and SOCS box containing 1 -0.0199838
HMGB1 high mobility group box 1 -0.019976
MAP4 microtubule-associated protein 4 -0.0197506
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0197268
KDM4C lysine (K)-specific demethylase 4C -0.0197204
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0195323
TUBB4B tubulin, beta 4B class IVb -0.0194897
TMSB10 thymosin beta 10 -0.0194314
SELENOK selenoprotein K -0.0190988
MYH14 myosin, heavy chain 14, non-muscle -0.0189082
FOSL1 FOS-like antigen 1 -0.0188875
GNAS GNAS complex locus -0.018654
RPS11 ribosomal protein S11 -0.0185815