BI-78D3_NCI-H23 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in NCI-H23 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-78D3_NCI-H23 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.100424
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0972701
PDE4D phosphodiesterase 4D, cAMP-specific 0.0721286
FNDC3B fibronectin type III domain containing 3B 0.0604207
AHNAK AHNAK nucleoprotein 0.0584693
ATXN1 ataxin 1 0.0557384
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0546633
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0529012
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0519749
TPI1 triosephosphate isomerase 1 0.0516964
CANX calnexin 0.0508695
TAS2R14 taste receptor, type 2, member 14 0.0479831
MACF1 microtubule-actin crosslinking factor 1 0.0473504
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0469057
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0455956
THSD4 thrombospondin, type I, domain containing 4 0.0443564
EXOC4 exocyst complex component 4 0.0443055
CSDE1 cold shock domain containing E1, RNA-binding 0.0441115
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0435551
KRT18 keratin 18, type I 0.0428433
TMSB10 thymosin beta 10 0.0420956
ENO1 enolase 1, (alpha) 0.0410782
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0410132
NCOA7 nuclear receptor coactivator 7 0.040742
PHF20 PHD finger protein 20 0.0400941
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0396007
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0390487
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0380884
XPO1 exportin 1 0.0380379
JMJD1C jumonji domain containing 1C 0.0368952
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0360897
PDIA4 protein disulfide isomerase family A, member 4 0.0352507
NR6A1 nuclear receptor subfamily 6, group A, member 1 0.0350791
ZBTB20 zinc finger and BTB domain containing 20 0.0341036
RAD51B RAD51 paralog B 0.033844
FCHSD2 FCH and double SH3 domains 2 0.0338242
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0336105
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0332735
SBF2 SET binding factor 2 0.0329674
SSH2 slingshot protein phosphatase 2 0.0319036
ANKRD28 ankyrin repeat domain 28 0.0311849
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.03082
RPL23 ribosomal protein L23 0.0305903
ZCCHC7 zinc finger, CCHC domain containing 7 0.0305735
CENPF centromere protein F, 350/400kDa 0.0304731
TLK1 tousled-like kinase 1 0.0304171
GOLGA4 golgin A4 0.030194
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0297743
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0293886
PGK1 phosphoglycerate kinase 1 0.0290476
RPLP0 ribosomal protein, large, P0 0.0290275
UBE2E2 ubiquitin-conjugating enzyme E2E 2 0.028655
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 0.0280741
IQGAP1 IQ motif containing GTPase activating protein 1 0.0277732
RABGAP1L RAB GTPase activating protein 1-like 0.0277144
TPX2 TPX2, microtubule-associated 0.0275185
ETV6 ets variant 6 0.0274727
APP amyloid beta (A4) precursor protein 0.027131
COPB1 coatomer protein complex, subunit beta 1 0.0267897
LPP LIM domain containing preferred translocation partner in lipoma 0.0266276
LDHA lactate dehydrogenase A 0.0265833
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0262705
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0262323
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0259155
RPS4X ribosomal protein S4, X-linked 0.0258523
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0256113
UBE2H ubiquitin-conjugating enzyme E2H 0.0250829
TBC1D5 TBC1 domain family, member 5 0.0250174
KRT8 keratin 8, type II 0.0246591
BASP1 brain abundant, membrane attached signal protein 1 0.0246149
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0245176
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0240933
PATJ PATJ crumbs cell polarity complex component 0.0240703
IGF2 insulin-like growth factor 2 0.0239328
H1-3 H1.3 linker histone, cluster member 0.0238102
NOP58 NOP58 ribonucleoprotein 0.0236754
RPL32 ribosomal protein L32 0.023665
SERBP1 SERPINE1 mRNA binding protein 1 0.0234458
ZNF292 zinc finger protein 292 0.0234244
GOLGB1 golgin B1 0.0232439
CPNE8 copine VIII 0.0231014
HM13 histocompatibility (minor) 13 0.0228761
CUX1 cut-like homeobox 1 0.0228003
PCBP2 poly(rC) binding protein 2 0.0226608
AKAP13 A kinase (PRKA) anchor protein 13 0.0226466
SMAD3 SMAD family member 3 0.022321
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0223083
DEK DEK proto-oncogene 0.0221633
PHF21A PHD finger protein 21A 0.0221418
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0221283
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0220372
ASPH aspartate beta-hydroxylase 0.0220099
TCF12 transcription factor 12 0.0220022
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0219422
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0213262
SRBD1 S1 RNA binding domain 1 0.0213177
PREPL prolyl endopeptidase-like 0.0212059
SIK3 SIK family kinase 3 0.0211693
MYOF myoferlin 0.0211532
SMYD3 SET and MYND domain containing 3 0.0210887

decreased expression

Symbol Name Standardized Value
TFPI2 tissue factor pathway inhibitor 2 -0.148561
KPNA4 karyopherin alpha 4 (importin alpha 3) -0.113012
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.104116
TXNRD1 thioredoxin reductase 1 -0.0846666
EGR1 early growth response 1 -0.0789109
POTEF POTE ankyrin domain family, member F -0.0630554
ACTG1 actin gamma 1 -0.0515466
NIPBL Nipped-B homolog (Drosophila) -0.0515353
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0450038
RTN4 reticulon 4 -0.0438287
EXT1 exostosin glycosyltransferase 1 -0.0421109
MARCHF4 membrane associated ring-CH-type finger 4 -0.0418056
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0415529
KPNB1 karyopherin (importin) beta 1 -0.0410424
FBXO11 F-box protein 11 -0.0405341
OSMR oncostatin M receptor -0.039148
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0388232
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0386091
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0383016
BRD2 bromodomain containing 2 -0.0374431
RAB7A RAB7A, member RAS oncogene family -0.0372975
ATP11A ATPase, class VI, type 11A -0.0364195
MCL1 myeloid cell leukemia 1 -0.0351722
ELL2 elongation factor, RNA polymerase II, 2 -0.0343454
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.034177
TMEM41B transmembrane protein 41B -0.0340066
WNT2B wingless-type MMTV integration site family, member 2B -0.0335506
ARPC5 actin related protein 2/3 complex, subunit 5, 16kDa -0.031833
LOC102724023 ES1 protein homolog, mitochondrial -0.0315691
WAC WW domain containing adaptor with coiled-coil -0.0313888
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0312695
SLC38A2 solute carrier family 38, member 2 -0.0307084
KTN1 kinectin 1 (kinesin receptor) -0.030559
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0303499
CELF1 CUGBP, Elav-like family member 1 -0.0302392
STC1 stanniocalcin 1 -0.029911
KMT2D lysine (K)-specific methyltransferase 2D -0.0296802
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0285601
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0284911
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0273899
INTS6 integrator complex subunit 6 -0.0267659
AEBP2 AE binding protein 2 -0.0263131
CTTNBP2NL CTTNBP2 N-terminal like -0.0262705
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0261216
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0251634
WWTR1 WW domain containing transcription regulator 1 -0.0251555
ANKRD11 ankyrin repeat domain 11 -0.0248469
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0244853
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 -0.024067
MYPN myopalladin -0.0240043
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0239725
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18 -0.0239458
SETX senataxin -0.0235562
DOCK5 dedicator of cytokinesis 5 -0.0233667
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.023173
USP8 ubiquitin specific peptidase 8 -0.0228198
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0224687
TAPBP TAP binding protein (tapasin) -0.0224117
NAP1L1 nucleosome assembly protein 1-like 1 -0.0223173
ACTN1 actinin, alpha 1 -0.0222904
VCL vinculin -0.0222375
MEF2D myocyte enhancer factor 2D -0.02223
PRRC2A proline-rich coiled-coil 2A -0.0221808
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0221131
PHIP pleckstrin homology domain interacting protein -0.0220941
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0218782
NR4A1 nuclear receptor subfamily 4, group A, member 1 -0.0218566
TUBA1B tubulin, alpha 1b -0.0217335
STAT1 signal transducer and activator of transcription 1, 91kDa -0.021606
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.021416
SET SET nuclear proto-oncogene -0.021282
SP3 Sp3 transcription factor -0.0209819
PKM pyruvate kinase, muscle -0.0208635
OGA O-GlcNAcase -0.0208064
SPAG9 sperm associated antigen 9 -0.0207268
PNPT1 polyribonucleotide nucleotidyltransferase 1 -0.0206163
YBX3 Y box binding protein 3 -0.020605
RIGI RNA sensor RIG-I -0.0205486
SNAP25 synaptosomal-associated protein, 25kDa -0.0203886
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0201433
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0201224
PER1 period circadian clock 1 -0.019981
AGO3 argonaute RISC catalytic component 3 -0.0199747
MAN2A1 mannosidase, alpha, class 2A, member 1 -0.0198909
MSN moesin -0.0197325
ARMH4 armadillo like helical domain containing 4 -0.0194539
SFPQ splicing factor proline/glutamine-rich -0.0193634
VDAC1 voltage-dependent anion channel 1 -0.019323
WSB1 WD repeat and SOCS box containing 1 -0.0193108
ZC3H13 zinc finger CCCH-type containing 13 -0.0190229
RRM2 ribonucleotide reductase M2 -0.018976
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0188919
ANKRD12 ankyrin repeat domain 12 -0.0188232
KCMF1 potassium channel modulatory factor 1 -0.018776
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0185727
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0184807
TPT1 tumor protein, translationally-controlled 1 -0.0184629
CDK17 cyclin-dependent kinase 17 -0.0184607
HLA-B major histocompatibility complex, class I, B -0.0184541
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0183323