BI-78D3_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-78D3_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0527378
FNDC3B fibronectin type III domain containing 3B 0.050464
FNIP1 folliculin interacting protein 1 0.0456363
ASPH aspartate beta-hydroxylase 0.038367
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0379165
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0349483
SRRM2 serine/arginine repetitive matrix 2 0.0339892
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0330963
DST dystonin 0.0328217
LOC112694756 uncharaterized LOC112694756 0.0313434
MACF1 microtubule-actin crosslinking factor 1 0.0309135
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0304806
GOLGB1 golgin B1 0.0297612
TRIO trio Rho guanine nucleotide exchange factor 0.0291938
ESYT2 extended synaptotagmin-like protein 2 0.0277074
ZFAND3 zinc finger, AN1-type domain 3 0.0274248
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0272347
BIRC6 baculoviral IAP repeat containing 6 0.0271122
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.026254
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0260317
SMAD3 SMAD family member 3 0.0257091
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0255763
YEATS2 YEATS domain containing 2 0.0251221
MBD5 methyl-CpG binding domain protein 5 0.0249072
ANKRD28 ankyrin repeat domain 28 0.0247021
SMYD3 SET and MYND domain containing 3 0.0244195
EIF5 eukaryotic translation initiation factor 5 0.0243015
ANO6 anoctamin 6 0.0242795
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0240038
INTS6 integrator complex subunit 6 0.0237354
ANKRD12 ankyrin repeat domain 12 0.0235291
SON SON DNA binding protein 0.0230738
FBXL17 F-box and leucine-rich repeat protein 17 0.0228876
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0228191
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.0227498
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0221174
ATXN1 ataxin 1 0.0219494
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0219016
CUL5 cullin 5 0.0215809
TTC19 tetratricopeptide repeat domain 19 0.021177
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0211453
DERA deoxyribose-phosphate aldolase (putative) 0.0209878
ADIPOR2 adiponectin receptor 2 0.0209333
DYNC2I1 dynein 2 intermediate chain 1 0.0209046
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) 0.0205475
ITGAV integrin, alpha V 0.0203267
CEMIP2 cell migration inducing hyaluronidase 2 0.0203011
LOC102724023 ES1 protein homolog, mitochondrial 0.0200348
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0198972
MEF2A myocyte enhancer factor 2A 0.0198695
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.019839
GPC5 glypican 5 0.019779
ARHGAP21 Rho GTPase activating protein 21 0.0197644
TES testin LIM domain protein 0.0196613
RB1CC1 RB1-inducible coiled-coil 1 0.0196317
PKM pyruvate kinase, muscle 0.0194519
MAP1B microtubule-associated protein 1B 0.0193003
ARCN1 archain 1 0.0191538
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0190841
MSANTD3 Myb/SANT-like DNA-binding domain containing 3 0.0189795
PRKCA protein kinase C, alpha 0.0187887
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0187551
RAD51B RAD51 paralog B 0.0186505
TRAM2 translocation associated membrane protein 2 0.0186478
JUN jun proto-oncogene 0.0183416
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0182105
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0180949
KLF12 Kruppel-like factor 12 0.0179382
PCDH7 protocadherin 7 0.0178654
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0178643
PBX3 pre-B-cell leukemia homeobox 3 0.0177012
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0173858
SBF2 SET binding factor 2 0.0173719
HNRNPM heterogeneous nuclear ribonucleoprotein M 0.0173298
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0170311
XPOT exportin, tRNA 0.0170303
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0169794
TAS2R14 taste receptor, type 2, member 14 0.016909
USP34 ubiquitin specific peptidase 34 0.0168457
PDE4D phosphodiesterase 4D, cAMP-specific 0.0168352
AKAP13 A kinase (PRKA) anchor protein 13 0.0168144
CCDC50 coiled-coil domain containing 50 0.0167831
ADAM17 ADAM metallopeptidase domain 17 0.0167018
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0166893
BABAM2 BRISC and BRCA1 A complex member 2 0.0166327
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0165145
MATR3 matrin 3 0.0164431
KDM3B lysine (K)-specific demethylase 3B 0.0164369
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0163853
KIDINS220 kinase D-interacting substrate, 220kDa 0.0163439
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 0.0162778
FLNB filamin B, beta 0.0162281
SHB Src homology 2 domain containing adaptor protein B 0.0161238
PTK2 protein tyrosine kinase 2 0.0160657
TXNRD1 thioredoxin reductase 1 0.0160499
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0160464
RPL23 ribosomal protein L23 0.0160302
ATP13A3 ATPase type 13A3 0.0160191
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0159818
NSRP1 nuclear speckle splicing regulatory protein 1 0.0157845

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.295346
VIM vimentin -0.0745947
PTMA prothymosin, alpha -0.0706541
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0684288
MT2A metallothionein 2A -0.0622896
HILPDA hypoxia inducible lipid droplet-associated -0.0621041
RPLP1 ribosomal protein, large, P1 -0.0538247
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0517618
CANX calnexin -0.0458499
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0457906
TPT1 tumor protein, translationally-controlled 1 -0.0437392
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0427391
SPAG9 sperm associated antigen 9 -0.041444
GNAS GNAS complex locus -0.040669
PNISR PNN-interacting serine/arginine-rich protein -0.0403447
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0403262
SETD5 SET domain containing 5 -0.0396979
FTL ferritin, light polypeptide -0.0392045
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0373314
RAB1A RAB1A, member RAS oncogene family -0.0342336
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0336016
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0327728
BASP1 brain abundant, membrane attached signal protein 1 -0.032716
ANXA2 annexin A2 -0.0313902
PDGFA platelet-derived growth factor alpha polypeptide -0.0303124
YBX3 Y box binding protein 3 -0.0297239
RAB7A RAB7A, member RAS oncogene family -0.0290662
UGCG UDP-glucose ceramide glucosyltransferase -0.0284849
GOLGA4 golgin A4 -0.0282604
SEPTIN7 septin 7 -0.0281833
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0281783
IER3 immediate early response 3 -0.0280994
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0275058
RPS29 ribosomal protein S29 -0.0274988
POTEF POTE ankyrin domain family, member F -0.026801
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0267896
RPL12 ribosomal protein L12 -0.0266733
SOD2 superoxide dismutase 2, mitochondrial -0.0263158
NLK nemo-like kinase -0.0262798
SDC4 syndecan 4 -0.0262774
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0261922
TRA2A transformer 2 alpha homolog (Drosophila) -0.0257067
RPL4 ribosomal protein L4 -0.0256973
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0256654
MORF4L2 mortality factor 4 like 2 -0.025663
RPL9 ribosomal protein L9 -0.025509
RPL15 ribosomal protein L15 -0.0253583
TM4SF1 transmembrane 4 L six family member 1 -0.0253207
TPX2 TPX2, microtubule-associated -0.0249204
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0248592
WAC WW domain containing adaptor with coiled-coil -0.0247701
FUS FUS RNA binding protein -0.0246861
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0246433
WDR45B WD repeat domain 45B -0.0240496
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0238902
CAVIN1 caveolae associated protein 1 -0.0233947
CALU calumenin -0.023344
PFN1 profilin 1 -0.0231754
FMNL2 formin-like 2 -0.0229334
APOLD1 apolipoprotein L domain containing 1 -0.0226827
OGA O-GlcNAcase -0.0226628
EIF1 eukaryotic translation initiation factor 1 -0.0226025
RBM39 RNA binding motif protein 39 -0.0225838
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0225177
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 -0.0224103
HSPH1 heat shock 105kDa/110kDa protein 1 -0.022097
BSG basigin (Ok blood group) -0.0219299
KIF5B kinesin family member 5B -0.0218925
RPS8 ribosomal protein S8 -0.0216742
RPS13 ribosomal protein S13 -0.0216563
PAIP2 poly(A) binding protein interacting protein 2 -0.0211207
MIS18BP1 MIS18 binding protein 1 -0.0210097
MAML2 mastermind-like 2 (Drosophila) -0.0208797
DOCK9 dedicator of cytokinesis 9 -0.0208174
PARD3 par-3 family cell polarity regulator -0.0207045
IGF2 insulin-like growth factor 2 -0.0206299
RPL7A ribosomal protein L7a -0.0206216
CFLAR CASP8 and FADD-like apoptosis regulator -0.0205447
NCKAP1 NCK-associated protein 1 -0.0205288
AKAP10 A kinase (PRKA) anchor protein 10 -0.0204286
CMTM6 CKLF-like MARVEL transmembrane domain containing 6 -0.0199359
RPL11 ribosomal protein L11 -0.0197273
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0194407
TMSB10 thymosin beta 10 -0.0192933
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0192869
TAOK3 TAO kinase 3 -0.0191931
ARHGAP5 Rho GTPase activating protein 5 -0.0191223
RPS6 ribosomal protein S6 -0.0190751
RPL32 ribosomal protein L32 -0.0190688
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.019036
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0189469
YTHDC1 YTH domain containing 1 -0.0186963
PDS5B PDS5 cohesin associated factor B -0.0184598
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0184081
COA1 cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae) -0.0183694
NPEPPS aminopeptidase puromycin sensitive -0.018088
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.0180497
RNF213 ring finger protein 213 -0.0179737
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0178332
RPS15 ribosomal protein S15 -0.0178177