BI-78D3_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description BI-78D3 perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the BI-78D3_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.106143
ZSWIM6 zinc finger, SWIM-type containing 6 0.06854
EXT1 exostosin glycosyltransferase 1 0.0545167
PTMA prothymosin, alpha 0.0503194
INTS6 integrator complex subunit 6 0.0482527
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0402322
ASPH aspartate beta-hydroxylase 0.0386323
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0374846
VCL vinculin 0.0326202
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0296424
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0289519
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0267811
FNDC3B fibronectin type III domain containing 3B 0.026547
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0245218
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0244899
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0243424
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0241849
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0235662
RAB10 RAB10, member RAS oncogene family 0.0233734
RPS6 ribosomal protein S6 0.022992
PDLIM5 PDZ and LIM domain 5 0.0228495
CANX calnexin 0.02271
ATF6 activating transcription factor 6 0.022441
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0215135
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0214638
GOLGB1 golgin B1 0.0209929
MCL1 myeloid cell leukemia 1 0.020854
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0202815
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0194009
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0193908
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0190168
LRRC23 leucine rich repeat containing 23 0.0189626
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0186155
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.018254
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0182027
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0178321
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0176636
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0174957
ERRFI1 ERBB receptor feedback inhibitor 1 0.017457
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0172954
SLC38A2 solute carrier family 38, member 2 0.0172418
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0169668
CTBP2 C-terminal binding protein 2 0.0166526
RPS25 ribosomal protein S25 0.0166394
CLIP2 CAP-GLY domain containing linker protein 2 0.0164867
APLP2 amyloid beta (A4) precursor-like protein 2 0.0163267
ACTG1 actin gamma 1 0.0161401
ERO1B endoplasmic reticulum oxidoreductase 1 beta 0.0159416
PDE4D phosphodiesterase 4D, cAMP-specific 0.0159363
RPL37A ribosomal protein L37a 0.0158939
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0158098
AEBP2 AE binding protein 2 0.015781
HILPDA hypoxia inducible lipid droplet-associated 0.0157584
RPS12 ribosomal protein S12 0.0154126
GOLGA4 golgin A4 0.015409
PKM pyruvate kinase, muscle 0.0153273
FBXO11 F-box protein 11 0.0151668
BICD1 bicaudal D homolog 1 (Drosophila) 0.0150659
RCOR1 REST corepressor 1 0.0150639
GPC6 glypican 6 0.0149502
MYO1E myosin IE 0.0148472
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0147374
GPATCH2L G patch domain containing 2-like 0.0147344
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0146751
ANKRD17 ankyrin repeat domain 17 0.0145999
IER3 immediate early response 3 0.0144415
RPL23 ribosomal protein L23 0.01429
NFE2L2 nuclear factor, erythroid 2-like 2 0.01424
RPS11 ribosomal protein S11 0.0142233
SOD2 superoxide dismutase 2, mitochondrial 0.0137178
ANXA2 annexin A2 0.0136184
RPS23 ribosomal protein S23 0.0135116
RPS24 ribosomal protein S24 0.0134236
SEC31A SEC31 homolog A (S. cerevisiae) 0.0133209
RPL31 ribosomal protein L31 0.0132755
ELL2 elongation factor, RNA polymerase II, 2 0.0131406
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.013084
NXN nucleoredoxin 0.0128861
RPL9 ribosomal protein L9 0.0128147
SEPTIN9 septin 9 0.0127815
LTBP1 latent transforming growth factor beta binding protein 1 0.0127617
RAD51B RAD51 paralog B 0.0127308
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0126937
TUFT1 tuftelin 1 0.0126629
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0126569
RUNX1 runt-related transcription factor 1 0.0126546
CADM1 cell adhesion molecule 1 0.0126462
SIK3 SIK family kinase 3 0.0126175
EGR1 early growth response 1 0.0126011
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.0125469
MORF4L2 mortality factor 4 like 2 0.0125208
EMP1 epithelial membrane protein 1 0.0124481
ZFAND3 zinc finger, AN1-type domain 3 0.0123823
ANKRD11 ankyrin repeat domain 11 0.012094
PTGES2 prostaglandin E synthase 2 0.0120408
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0119247
MTDH metadherin 0.011866
SFTPA2 surfactant protein A2 0.0117712
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0117522
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0117462

decreased expression

Symbol Name Standardized Value
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.138898
FN1 fibronectin 1 -0.125086
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.118991
ITGA1 integrin, alpha 1 -0.0626626
HMGA2 high mobility group AT-hook 2 -0.0600966
NRG1 neuregulin 1 -0.0470722
TMEM156 transmembrane protein 156 -0.0463718
KLHL5 kelch-like family member 5 -0.0317287
OSMR oncostatin M receptor -0.028814
NAMPT nicotinamide phosphoribosyltransferase -0.0283549
FTH1 ferritin, heavy polypeptide 1 -0.0254416
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0238343
SYT1 synaptotagmin I -0.0232768
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0227234
ETV1 ets variant 1 -0.0209871
SOX4 SRY (sex determining region Y)-box 4 -0.0201902
GLIS3 GLIS family zinc finger 3 -0.0200286
SQSTM1 sequestosome 1 -0.01948
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0189123
NRP1 neuropilin 1 -0.0186062
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0169648
TMEM165 transmembrane protein 165 -0.0166507
TMSB4X thymosin beta 4, X-linked -0.0166309
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0165156
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0162319
RUNX2 runt-related transcription factor 2 -0.0157859
RAI14 retinoic acid induced 14 -0.0157267
TMSB10 thymosin beta 10 -0.0152908
MCTP2 multiple C2 domains, transmembrane 2 -0.0152192
AOPEP aminopeptidase O (putative) -0.015156
MRPS6 mitochondrial ribosomal protein S6 -0.0150585
ZMYND8 zinc finger, MYND-type containing 8 -0.0150269
PRRC2C proline-rich coiled-coil 2C -0.0148266
SMOX spermine oxidase -0.0144814
TNS3 tensin 3 -0.0144303
NPEPPS aminopeptidase puromycin sensitive -0.0142898
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0142139
NPC1 Niemann-Pick disease, type C1 -0.0139038
HIPK2 homeodomain interacting protein kinase 2 -0.0139013
PELO pelota homolog (Drosophila) -0.0130203
EFNA5 ephrin-A5 -0.0129488
ETV6 ets variant 6 -0.0127523
FAM20C family with sequence similarity 20, member C -0.0126282
BASP1 brain abundant, membrane attached signal protein 1 -0.0125801
S100A6 S100 calcium binding protein A6 -0.012567
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0123262
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0121625
IFI16 interferon, gamma-inducible protein 16 -0.012016
SOS1 son of sevenless homolog 1 (Drosophila) -0.0117463
LRP5 low density lipoprotein receptor-related protein 5 -0.0116853
LY6E lymphocyte antigen 6 complex, locus E -0.0114448
ARHGAP35 Rho GTPase activating protein 35 -0.0114278
RBM25 RNA binding motif protein 25 -0.0113579
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.011343
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0112471
ITGB5 integrin, beta 5 -0.0111955
LOC112694756 uncharaterized LOC112694756 -0.0109793
TSC22D1 TSC22 domain family, member 1 -0.0109194
RTN4 reticulon 4 -0.010889
AHR aryl hydrocarbon receptor -0.0106787
DUSP6 dual specificity phosphatase 6 -0.0105195
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.00999116
NRIP1 nuclear receptor interacting protein 1 -0.00986865
FAF2 Fas associated factor family member 2 -0.00972604
SIPA1L2 signal-induced proliferation-associated 1 like 2 -0.00969989
DNAH5 dynein, axonemal, heavy chain 5 -0.00960579
FNBP1 formin binding protein 1 -0.00957031
VEGFA vascular endothelial growth factor A -0.00938337
ARHGAP5 Rho GTPase activating protein 5 -0.00933662
RICTOR RPTOR independent companion of MTOR, complex 2 -0.00913752
ATXN10 ataxin 10 -0.00902261
FBN1 fibrillin 1 -0.00901383
TGFB2 transforming growth factor, beta 2 -0.00900058
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.00898622
LMNA lamin A/C -0.00880694
GCC2 GRIP and coiled-coil domain containing 2 -0.00876599
CFB complement factor B -0.00873429
CP ceruloplasmin (ferroxidase) -0.00871878
LOC102724023 ES1 protein homolog, mitochondrial -0.00858593
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.00847918
LIFR leukemia inhibitory factor receptor alpha -0.00842887
TFPI2 tissue factor pathway inhibitor 2 -0.00833588
TGFA transforming growth factor, alpha -0.008322
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.00822189
ADD3 adducin 3 (gamma) -0.0082094
CCNJL cyclin J-like -0.0081478
SON SON DNA binding protein -0.00814421
SYNJ2 synaptojanin 2 -0.00800349
CAB39 calcium binding protein 39 -0.00798839
DPYD dihydropyrimidine dehydrogenase -0.00798602
ANTXR2 anthrax toxin receptor 2 -0.00791067
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.00787411
AHI1 Abelson helper integration site 1 -0.00782189
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0078175
NEMF nuclear export mediator factor -0.00777164
LPCAT1 lysophosphatidylcholine acyltransferase 1 -0.00773445
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.00772931
SPRED1 sprouty-related, EVH1 domain containing 1 -0.00772877
KDM5B lysine (K)-specific demethylase 5B -0.00765706
PLAUR plasminogen activator, urokinase receptor -0.00756556