BL3907 (USP28) Gene Set

Dataset NURSA Protein Complexes
Category proteomics
Type protein complex
Description protein complex identified as [antibody identifier] ([gene symbol of bait protein]) (Nuclear Receptor Signaling Atlas)
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Genes

284 proteins in the BL3907 (USP28) protein complex recovered by IP-MS from the NURSA Protein Complexes dataset.

Symbol Name
ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3
ACTG1 actin gamma 1
ACTG2 actin, gamma 2, smooth muscle, enteric
ACTL6A actin-like 6A
AHNAK AHNAK nucleoprotein
AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)
ANLN anillin, actin binding protein
ANXA2 annexin A2
API5 apoptosis inhibitor 5
ARHGDIA Rho GDP dissociation inhibitor (GDI) alpha
ARHGEF2 Rho/Rac guanine nucleotide exchange factor (GEF) 2
ARPC4 actin related protein 2/3 complex, subunit 4, 20kDa
ATR ATR serine/threonine kinase
ATXN10 ataxin 10
B3GALTL beta 1,3-galactosyltransferase-like
BAG6 BCL2-associated athanogene 6
C6ORF165 chromosome 6 open reading frame 165
CAND1 cullin-associated and neddylation-dissociated 1
CAPRIN1 cell cycle associated protein 1
CCAR2 cell cycle and apoptosis regulator 2
CCT2 chaperonin containing TCP1, subunit 2 (beta)
CCT3 chaperonin containing TCP1, subunit 3 (gamma)
CCT4 chaperonin containing TCP1, subunit 4 (delta)
CCT5 chaperonin containing TCP1, subunit 5 (epsilon)
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1)
CCT7 chaperonin containing TCP1, subunit 7 (eta)
CCT8 chaperonin containing TCP1, subunit 8 (theta)
CDK9 cyclin-dependent kinase 9
CFL2 cofilin 2 (muscle)
CHD7 chromodomain helicase DNA binding protein 7
CHTF18 CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)
CKAP5 cytoskeleton associated protein 5
CLIC1 chloride intracellular channel 1
CNOT1 CCR4-NOT transcription complex, subunit 1
COPZ1 coatomer protein complex, subunit zeta 1
CSE1L CSE1 chromosome segregation 1-like (yeast)
CTNND1 catenin (cadherin-associated protein), delta 1
CTTN cortactin
DARS aspartyl-tRNA synthetase
DBT dihydrolipoamide branched chain transacylase E2
DCD dermcidin
DDB1 damage-specific DNA binding protein 1, 127kDa
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DDX19A DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A
DDX39A DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15
DIAPH3 diaphanous-related formin 3
DIDO1 death inducer-obliterator 1
DLAT dihydrolipoamide S-acetyltransferase
DLD dihydrolipoamide dehydrogenase
DLST dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)
DMAP1 DNA methyltransferase 1 associated protein 1
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNM2 dynamin 2
DOCK8 dedicator of cytokinesis 8
DSG1 desmoglein 1
DSP desmoplakin
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1
DYNLL2 dynein, light chain, LC8-type 2
ECT2 epithelial cell transforming 2
EEF1A1 eukaryotic translation elongation factor 1 alpha 1
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
EEF1G eukaryotic translation elongation factor 1 gamma
EEF2 eukaryotic translation elongation factor 2
EFTUD2 elongation factor Tu GTP binding domain containing 2
EIF4A1 eukaryotic translation initiation factor 4A1
EIF4A2 eukaryotic translation initiation factor 4A2
EIF4A3 eukaryotic translation initiation factor 4A3
EIF4H eukaryotic translation initiation factor 4H
ELF1 E74-like factor 1 (ets domain transcription factor)
ENO1 enolase 1, (alpha)
ENO3 enolase 3 (beta, muscle)
FAM129B family with sequence similarity 129, member B
FASN fatty acid synthase
FEN1 flap structure-specific endonuclease 1
FHL2 four and a half LIM domains 2
FHL3 four and a half LIM domains 3
FIP1L1 factor interacting with PAPOLA and CPSF1
FLNA filamin A, alpha
FUBP1 far upstream element (FUSE) binding protein 1
GAPDH glyceraldehyde-3-phosphate dehydrogenase
GATAD2B GATA zinc finger domain containing 2B
GBF1 golgi brefeldin A resistant guanine nucleotide exchange factor 1
GCN1L1 GCN1 general control of amino-acid synthesis 1-like 1 (yeast)
GMPS guanine monphosphate synthase
GPI glucose-6-phosphate isomerase
GTF2I general transcription factor IIi
GTF2IRD2B GTF2I repeat domain containing 2B
GTF3C1 general transcription factor IIIC, polypeptide 1, alpha 220kDa
GTF3C5 general transcription factor IIIC, polypeptide 5, 63kDa
HCFC1 host cell factor C1
HDAC1 histone deacetylase 1
HDLBP high density lipoprotein binding protein
HEATR1 HEAT repeat containing 1
HLTF helicase-like transcription factor
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPAB heterogeneous nuclear ribonucleoprotein A/B
HNRNPF heterogeneous nuclear ribonucleoprotein F
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H)
HNRNPK heterogeneous nuclear ribonucleoprotein K
HNRNPLL heterogeneous nuclear ribonucleoprotein L-like
HNRNPM heterogeneous nuclear ribonucleoprotein M
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)
HRNR hornerin
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1
HSPA1B heat shock 70kDa protein 1B
HSPA1L heat shock 70kDa protein 1-like
HSPA2 heat shock 70kDa protein 2
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
HSPA6 heat shock 70kDa protein 6 (HSP70B')
HSPA8 heat shock 70kDa protein 8
HSPB1 heat shock 27kDa protein 1
HSPD1 heat shock 60kDa protein 1 (chaperonin)
IFT81 intraflagellar transport 81
IGFBP3 insulin-like growth factor binding protein 3
INO80E INO80 complex subunit E
INTS1 integrator complex subunit 1
IQGAP1 IQ motif containing GTPase activating protein 1
ITIH6 inter-alpha-trypsin inhibitor heavy chain family, member 6
KIF22 kinesin family member 22
KIF23 kinesin family member 23
KIF5C kinesin family member 5C
KIFC1 kinesin family member C1
KPNA1 karyopherin alpha 1 (importin alpha 5)
KPNA4 karyopherin alpha 4 (importin alpha 3)
KPNB1 karyopherin (importin) beta 1
LAS1L LAS1-like (S. cerevisiae)
LDHA lactate dehydrogenase A
LDHB lactate dehydrogenase B
LMNA lamin A/C
LMNB2 lamin B2
LRGUK leucine-rich repeats and guanylate kinase domain containing
MAD1L1 MAD1 mitotic arrest deficient-like 1 (yeast)
MAD2L1 MAD2 mitotic arrest deficient-like 1 (yeast)
MAT2A methionine adenosyltransferase II, alpha
MATR3 matrin 3
MDC1 mediator of DNA-damage checkpoint 1
METTL16 methyltransferase like 16
MKI67 marker of proliferation Ki-67
MLH1 mutL homolog 1
MOB1A MOB kinase activator 1A
MSH2 mutS homolog 2
MSH6 mutS homolog 6
MTA2 metastasis associated 1 family, member 2
MTPN myotrophin
NACA nascent polypeptide-associated complex alpha subunit
NACC1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing
NAV2 neuron navigator 2
NBN nibrin
NCAPD3 non-SMC condensin II complex, subunit D3
NDRG1 N-myc downstream regulated 1
NELFA negative elongation factor complex member A
NELFB negative elongation factor complex member B
NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
NFIX nuclear factor I/X (CCAAT-binding transcription factor)
NOLC1 nucleolar and coiled-body phosphoprotein 1
NONO non-POU domain containing, octamer-binding
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NUDC nudC nuclear distribution protein
NUMA1 nuclear mitotic apparatus protein 1
NUP133 nucleoporin 133kDa
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
OGFR opioid growth factor receptor
OVOL1 ovo-like zinc finger 1
PARP1 poly (ADP-ribose) polymerase 1
PCBP1 poly(rC) binding protein 1
PCBP2 poly(rC) binding protein 2
PCBP3 poly(rC) binding protein 3
PCIF1 PDX1 C-terminal inhibiting factor 1
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
PDHX pyruvate dehydrogenase complex, component X
PDS5A PDS5 cohesin associated factor A
PEBP1 phosphatidylethanolamine binding protein 1
PFKP phosphofructokinase, platelet
PFN1 profilin 1
PGK1 phosphoglycerate kinase 1
PHGDH phosphoglycerate dehydrogenase
PIAS4 protein inhibitor of activated STAT, 4
PLIN3 perilipin 3
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
POLR1A polymerase (RNA) I polypeptide A, 194kDa
POLR2E polymerase (RNA) II (DNA directed) polypeptide E, 25kDa
PPIA peptidylprolyl isomerase A (cyclophilin A)
PPIB peptidylprolyl isomerase B (cyclophilin B)
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PRDX1 peroxiredoxin 1
PRDX6 peroxiredoxin 6
PSME3 proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)
PTBP1 polypyrimidine tract binding protein 1
PUF60 poly-U binding splicing factor 60KDa
QKI QKI, KH domain containing, RNA binding
RACGAP1 Rac GTPase activating protein 1
RAD50 RAD50 homolog (S. cerevisiae)
RANGAP1 Ran GTPase activating protein 1
RAVER1 ribonucleoprotein, PTB-binding 1
RBBP5 retinoblastoma binding protein 5
RBBP7 retinoblastoma binding protein 7
RBM39 RNA binding motif protein 39
RCN1 reticulocalbin 1, EF-hand calcium binding domain
RFC1 replication factor C (activator 1) 1, 145kDa
RFC2 replication factor C (activator 1) 2, 40kDa
RFC3 replication factor C (activator 1) 3, 38kDa
RFC4 replication factor C (activator 1) 4, 37kDa
RFC5 replication factor C (activator 1) 5, 36.5kDa
RFX5 regulatory factor X, 5 (influences HLA class II expression)
RGPD8 RANBP2-like and GRIP domain containing 8
RIF1 replication timing regulatory factor 1
RPA2 replication protein A2, 32kDa
RPRD2 regulation of nuclear pre-mRNA domain containing 2
RQCD1 RCD1 required for cell differentiation1 homolog (S. pombe)
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
RTN4 reticulon 4
RUVBL1 RuvB-like AAA ATPase 1
RUVBL2 RuvB-like AAA ATPase 2
SAR1A secretion associated, Ras related GTPase 1A
SEPT2 septin 2
SEPT9 septin 9
SFPQ splicing factor proline/glutamine-rich
SKP1 S-phase kinase-associated protein 1
SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SMC1A structural maintenance of chromosomes 1A
SMC3 structural maintenance of chromosomes 3
SMC4 structural maintenance of chromosomes 4
SNRPA small nuclear ribonucleoprotein polypeptide A
SNRPA1 small nuclear ribonucleoprotein polypeptide A'
SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 18kDa
SNRPE small nuclear ribonucleoprotein polypeptide E
SNRPN small nuclear ribonucleoprotein polypeptide N
SOD1 superoxide dismutase 1, soluble
SOX9 SRY (sex determining region Y)-box 9
SP1 Sp1 transcription factor
SPAG17 sperm associated antigen 17
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)
SUMO2 small ubiquitin-like modifier 2
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAGLN2 transgelin 2
TARDBP TAR DNA binding protein
TCEB1 transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
TCEB2 transcription elongation factor B (SIII), polypeptide 2 (18kDa, elongin B)
TKT transketolase
TOP2A topoisomerase (DNA) II alpha 170kDa
TOX4 TOX high mobility group box family member 4
TP53BP1 tumor protein p53 binding protein 1
TPI1 triosephosphate isomerase 1
TPP2 tripeptidyl peptidase II
TPR translocated promoter region, nuclear basket protein
TPX2 TPX2, microtubule-associated
TRIM28 tripartite motif containing 28
TRIM75P tripartite motif containing 75, pseudogene
TRIP13 thyroid hormone receptor interactor 13
TRUB1 TruB pseudouridine (psi) synthase family member 1
TUBA1C tubulin, alpha 1c
TUBA3E tubulin, alpha 3e
TUBB tubulin, beta class I
TUBB2A tubulin, beta 2A class IIa
TUBB3 tubulin, beta 3 class III
TUBB4B tubulin, beta 4B class IVb
TUBB6 tubulin, beta 6 class V
TUBB7P tubulin, beta 7, pseudogene
TXN thioredoxin
U2AF1 U2 small nuclear RNA auxiliary factor 1
UBA1 ubiquitin-like modifier activating enzyme 1
UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1
USP28 ubiquitin specific peptidase 28
VIM vimentin
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae)
WAPAL wings apart-like homolog (Drosophila)
WDR5 WD repeat domain 5
WHSC1L1 Wolf-Hirschhorn syndrome candidate 1-like 1
WIPI2 WD repeat domain, phosphoinositide interacting 2
WRNIP1 Werner helicase interacting protein 1
XPO1 exportin 1
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta