| Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
| Similar Terms | |
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148 genes differentially expressed following the BRD-A39996500_radicicol_HS578T_3_h_1.11_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| 1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
| AKR1C1 | aldo-keto reductase family 1, member C1 |
| AKR1C2 | aldo-keto reductase family 1, member C2 |
| AQP3 | aquaporin 3 (Gill blood group) |
| AQP9 | aquaporin 9 |
| ATP6V0E2 | ATPase, H+ transporting V0 subunit e2 |
| AXIN1 | axin 1 |
| BAG3 | BCL2-associated athanogene 3 |
| CACYBP | calcyclin binding protein |
| CASP7 | caspase 7, apoptosis-related cysteine peptidase |
| CECR1 | cat eye syndrome chromosome region, candidate 1 |
| CES1 | carboxylesterase 1 |
| CFB | complement factor B |
| CHORDC1 | cysteine and histidine-rich domain (CHORD) containing 1 |
| CLDN10 | claudin 10 |
| CLU | clusterin |
| CXCL13 | chemokine (C-X-C motif) ligand 13 |
| DDIT4 | DNA-damage-inducible transcript 4 |
| DNAJA1 | DnaJ (Hsp40) homolog, subfamily A, member 1 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DNAJB2 | DnaJ (Hsp40) homolog, subfamily B, member 2 |
| DNAJB4 | DnaJ (Hsp40) homolog, subfamily B, member 4 |
| EFEMP1 | EGF containing fibulin-like extracellular matrix protein 1 |
| EYA2 | EYA transcriptional coactivator and phosphatase 2 |
| FASN | fatty acid synthase |
| FBP1 | fructose-1,6-bisphosphatase 1 |
| FCHO1 | FCH domain only 1 |
| FCN1 | ficolin (collagen/fibrinogen domain containing) 1 |
| FLRT3 | fibronectin leucine rich transmembrane protein 3 |
| GJA1 | gap junction protein, alpha 1, 43kDa |
| HEBP1 | heme binding protein 1 |
| HMGCS1 | 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) |
| HMOX1 | heme oxygenase 1 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 |
| HSPA1A | heat shock 70kDa protein 1A |
| HSPA2 | heat shock 70kDa protein 2 |
| HSPA6 | heat shock 70kDa protein 6 (HSP70B') |
| HSPA8 | heat shock 70kDa protein 8 |
| HSPD1 | heat shock 60kDa protein 1 (chaperonin) |
| HSPE1 | heat shock 10kDa protein 1 |
| HSPH1 | heat shock 105kDa/110kDa protein 1 |
| IGKC | immunoglobulin kappa constant |
| IGL | immunoglobulin lambda locus |
| JMJD6 | jumonji domain containing 6 |
| LIMCH1 | LIM and calponin homology domains 1 |
| LYZ | lysozyme |
| MLLT11 | myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11 |
| MMP12 | matrix metallopeptidase 12 |
| MMP7 | matrix metallopeptidase 7 |
| NEAT1 | nuclear paraspeckle assembly transcript 1 (non-protein coding) |
| NEBL | nebulette |
| NEFM | neurofilament, medium polypeptide |
| NOTCH1 | notch 1 |
| NRIP3 | nuclear receptor interacting protein 3 |
| PIR | pirin (iron-binding nuclear protein) |
| PLBD1 | phospholipase B domain containing 1 |
| PPBP | pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) |
| PTGER4 | prostaglandin E receptor 4 (subtype EP4) |
| PTGS2 | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) |
| RARRES1 | retinoic acid receptor responder (tazarotene induced) 1 |
| RGS1 | regulator of G-protein signaling 1 |
| RGS2 | regulator of G-protein signaling 2 |
| RGS4 | regulator of G-protein signaling 4 |
| RPS11 | ribosomal protein S11 |
| SAT1 | spermidine/spermine N1-acetyltransferase 1 |
| SFTPA2 | surfactant protein A2 |
| SFTPB | surfactant protein B |
| SFTPC | surfactant protein C |
| SLC2A3 | solute carrier family 2 (facilitated glucose transporter), member 3 |
| SLC7A11 | solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 |
| SPR | sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase) |
| TLR4 | toll-like receptor 4 |
| TRD | T cell receptor delta locus |
| TREM1 | triggering receptor expressed on myeloid cells 1 |
| TSPYL5 | TSPY-like 5 |
| TUSC3 | tumor suppressor candidate 3 |
| VCAM1 | vascular cell adhesion molecule 1 |
| WDR7 | WD repeat domain 7 |
| Symbol | Name |
|---|---|
| ANXA3 | annexin A3 |
| APOD | apolipoprotein D |
| AREG | amphiregulin |
| ARG1 | arginase 1 |
| ARL4C | ADP-ribosylation factor-like 4C |
| AZGP1 | alpha-2-glycoprotein 1, zinc-binding |
| BACH2 | BTB and CNC homology 1, basic leucine zipper transcription factor 2 |
| CASP10 | caspase 10, apoptosis-related cysteine peptidase |
| CCND2 | cyclin D2 |
| CREB1 | cAMP responsive element binding protein 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| DPP4 | dipeptidyl-peptidase 4 |
| DPT | dermatopontin |
| ECM1 | extracellular matrix protein 1 |
| EDN1 | endothelin 1 |
| EREG | epiregulin |
| F2RL1 | coagulation factor II (thrombin) receptor-like 1 |
| FBN1 | fibrillin 1 |
| FOSL1 | FOS-like antigen 1 |
| FST | follistatin |
| GALNT3 | polypeptide N-acetylgalactosaminyltransferase 3 |
| GNG11 | guanine nucleotide binding protein (G protein), gamma 11 |
| GPM6A | glycoprotein M6A |
| GPRC5B | G protein-coupled receptor, class C, group 5, member B |
| GPX1 | glutathione peroxidase 1 |
| HDAC9 | histone deacetylase 9 |
| HES1 | hes family bHLH transcription factor 1 |
| HOXA5 | homeobox A5 |
| ID4 | inhibitor of DNA binding 4, dominant negative helix-loop-helix protein |
| IER3 | immediate early response 3 |
| IFI16 | interferon, gamma-inducible protein 16 |
| IFIT1 | interferon-induced protein with tetratricopeptide repeats 1 |
| IGF2BP3 | insulin-like growth factor 2 mRNA binding protein 3 |
| KHDRBS3 | KH domain containing, RNA binding, signal transduction associated 3 |
| KRT23 | keratin 23, type I |
| LAMA3 | laminin, alpha 3 |
| MAFF | v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F |
| MFAP5 | microfibrillar associated protein 5 |
| MGLL | monoglyceride lipase |
| MGP | matrix Gla protein |
| MYBL1 | v-myb avian myeloblastosis viral oncogene homolog-like 1 |
| NFKBIA | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha |
| NRN1 | neuritin 1 |
| NT5E | 5'-nucleotidase, ecto (CD73) |
| OAS3 | 2'-5'-oligoadenylate synthetase 3, 100kDa |
| OXTR | oxytocin receptor |
| PCNA | proliferating cell nuclear antigen |
| PDGFC | platelet derived growth factor C |
| PERP | PERP, TP53 apoptosis effector |
| PSPH | phosphoserine phosphatase |
| PTGDS | prostaglandin D2 synthase 21kDa (brain) |
| RHOBTB3 | Rho-related BTB domain containing 3 |
| RRAS2 | related RAS viral (r-ras) oncogene homolog 2 |
| S100P | S100 calcium binding protein P |
| SFRP1 | secreted frizzled-related protein 1 |
| SRPX | sushi-repeat containing protein, X-linked |
| ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
| TF | transferrin |
| TFPI2 | tissue factor pathway inhibitor 2 |
| THBS2 | thrombospondin 2 |
| TIPARP | TCDD-inducible poly(ADP-ribose) polymerase |
| TMEM158 | transmembrane protein 158 (gene/pseudogene) |
| TSPAN8 | tetraspanin 8 |
| TXNIP | thioredoxin interacting protein |
| UGCG | UDP-glucose ceramide glucosyltransferase |
| VCAN | versican |
| VGLL4 | vestigial-like family member 4 |
| WASF3 | WAS protein family, member 3 |
| WT1 | Wilms tumor 1 |
| WWTR1 | WW domain containing transcription regulator 1 |
