| Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
| Similar Terms | |
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128 genes differentially expressed following the BRD-A39996500_radicicol_MDAMB231_3_h_0.04_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| 1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
| ACTA1 | actin, alpha 1, skeletal muscle |
| AKR1C1 | aldo-keto reductase family 1, member C1 |
| AKR1C2 | aldo-keto reductase family 1, member C2 |
| AKR1C3 | aldo-keto reductase family 1, member C3 |
| ALDH1A1 | aldehyde dehydrogenase 1 family, member A1 |
| ALOX5AP | arachidonate 5-lipoxygenase-activating protein |
| APOE | apolipoprotein E |
| ATP1A2 | ATPase, Na+/K+ transporting, alpha 2 polypeptide |
| BAG3 | BCL2-associated athanogene 3 |
| BST2 | bone marrow stromal cell antigen 2 |
| C3 | complement component 3 |
| CAB39 | calcium binding protein 39 |
| CCL2 | chemokine (C-C motif) ligand 2 |
| COL1A1 | collagen, type I, alpha 1 |
| COL1A2 | collagen, type I, alpha 2 |
| COL3A1 | collagen, type III, alpha 1 |
| CTGF | connective tissue growth factor |
| CTSH | cathepsin H |
| DAPK1 | death-associated protein kinase 1 |
| DCN | decorin |
| DDX3Y | DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
| DIO2 | deiodinase, iodothyronine, type II |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DUSP22 | dual specificity phosphatase 22 |
| F3 | coagulation factor III (thromboplastin, tissue factor) |
| FAS | Fas cell surface death receptor |
| GCNT3 | glucosaminyl (N-acetyl) transferase 3, mucin type |
| GJA1 | gap junction protein, alpha 1, 43kDa |
| GLUL | glutamate-ammonia ligase |
| HBB | hemoglobin, beta |
| HIST1H2BG | histone cluster 1, H2bg |
| HSPA1A | heat shock 70kDa protein 1A |
| HSPA6 | heat shock 70kDa protein 6 (HSP70B') |
| HSPA8 | heat shock 70kDa protein 8 |
| HSPH1 | heat shock 105kDa/110kDa protein 1 |
| KLK11 | kallikrein-related peptidase 11 |
| MB | myoglobin |
| MGP | matrix Gla protein |
| MUC16 | mucin 16, cell surface associated |
| MYBPC1 | myosin binding protein C, slow type |
| MYO6 | myosin VI |
| NEFH | neurofilament, heavy polypeptide |
| NLGN4X | neuroligin 4, X-linked |
| PAN2 | PAN2 poly(A) specific ribonuclease subunit |
| PEG3 | paternally expressed 3 |
| PHGDH | phosphoglycerate dehydrogenase |
| PLAC8 | placenta-specific 8 |
| PLK2 | polo-like kinase 2 |
| POSTN | periostin, osteoblast specific factor |
| PTGS1 | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| PYCARD | PYD and CARD domain containing |
| RGS1 | regulator of G-protein signaling 1 |
| RGS2 | regulator of G-protein signaling 2 |
| SERPINF1 | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 |
| TBX2 | T-box 2 |
| TIMP3 | TIMP metallopeptidase inhibitor 3 |
| TMSB15A | thymosin beta 15a |
| TNNC1 | troponin C type 1 (slow) |
| TSPAN8 | tetraspanin 8 |
| WFDC2 | WAP four-disulfide core domain 2 |
| ZFP36L1 | ZFP36 ring finger protein-like 1 |
| Symbol | Name |
|---|---|
| ADH1B | alcohol dehydrogenase 1B (class I), beta polypeptide |
| ALDH1A3 | aldehyde dehydrogenase 1 family, member A3 |
| ALDH2 | aldehyde dehydrogenase 2 family (mitochondrial) |
| BLNK | B-cell linker |
| BMP2 | bone morphogenetic protein 2 |
| CADM1 | cell adhesion molecule 1 |
| CCL19 | chemokine (C-C motif) ligand 19 |
| CEACAM6 | carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) |
| CP | ceruloplasmin (ferroxidase) |
| CPVL | carboxypeptidase, vitellogenic-like |
| CREB1 | cAMP responsive element binding protein 1 |
| EPHA3 | EPH receptor A3 |
| EREG | epiregulin |
| F2RL1 | coagulation factor II (thrombin) receptor-like 1 |
| FGFR3 | fibroblast growth factor receptor 3 |
| FOXC1 | forkhead box C1 |
| FST | follistatin |
| GAGE3 | G antigen 3 |
| GBP1 | guanylate binding protein 1, interferon-inducible |
| GNAI1 | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 |
| GPNMB | glycoprotein (transmembrane) nmb |
| HOXA10 | homeobox A10 |
| ID1 | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein |
| IDO1 | indoleamine 2,3-dioxygenase 1 |
| IGHM | immunoglobulin heavy constant mu |
| IGLL1 | immunoglobulin lambda-like polypeptide 1 |
| IL13RA2 | interleukin 13 receptor, alpha 2 |
| IRF8 | interferon regulatory factor 8 |
| KCNJ16 | potassium channel, inwardly rectifying subfamily J, member 16 |
| KRT15 | keratin 15, type I |
| LAP3 | leucine aminopeptidase 3 |
| MAGEA12 | melanoma antigen family A12 |
| MAGEA3 | melanoma antigen family A3 |
| MAGEA6 | melanoma antigen family A6 |
| MAP7 | microtubule-associated protein 7 |
| MET | MET proto-oncogene, receptor tyrosine kinase |
| MICAL2 | microtubule associated monooxygenase, calponin and LIM domain containing 2 |
| MMP1 | matrix metallopeptidase 1 |
| MMP9 | matrix metallopeptidase 9 |
| NUSAP1 | nucleolar and spindle associated protein 1 |
| PCP4 | Purkinje cell protein 4 |
| PCSK1 | proprotein convertase subtilisin/kexin type 1 |
| PERP | PERP, TP53 apoptosis effector |
| PLCB4 | phospholipase C, beta 4 |
| PLIN1 | perilipin 1 |
| PPP1R16B | protein phosphatase 1, regulatory subunit 16B |
| PRKAR2B | protein kinase, cAMP-dependent, regulatory, type II, beta |
| RND3 | Rho family GTPase 3 |
| S100A2 | S100 calcium binding protein A2 |
| S100A7 | S100 calcium binding protein A7 |
| S100A8 | S100 calcium binding protein A8 |
| S100A9 | S100 calcium binding protein A9 |
| SATB1 | SATB homeobox 1 |
| SESN1 | sestrin 1 |
| SLC38A2 | solute carrier family 38, member 2 |
| SLC7A7 | solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 |
| SPP1 | secreted phosphoprotein 1 |
| SRSF6 | serine/arginine-rich splicing factor 6 |
| TCF4 | transcription factor 4 |
| TLR4 | toll-like receptor 4 |
| TRAC | T cell receptor alpha constant |
| TRD | T cell receptor delta locus |
| VCAN | versican |
| VTCN1 | V-set domain containing T cell activation inhibitor 1 |
| WARS | tryptophanyl-tRNA synthetase |
| ZFP36L2 | ZFP36 ring finger protein-like 2 |
