| Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
| Similar Terms | |
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129 genes differentially expressed following the BRD-K64634304_Retinoic acid_RKO_6.0_h_40.0_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| 1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
| ACOX2 | acyl-CoA oxidase 2, branched chain |
| ANPEP | alanyl (membrane) aminopeptidase |
| AREG | amphiregulin |
| ATN1 | atrophin 1 |
| ATP6V1C1 | ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1 |
| AUTS2 | autism susceptibility candidate 2 |
| BEX1 | brain expressed, X-linked 1 |
| BEX4 | brain expressed, X-linked 4 |
| BMP4 | bone morphogenetic protein 4 |
| C3ORF14 | chromosome 3 open reading frame 14 |
| CA12 | carbonic anhydrase XII |
| CCND2 | cyclin D2 |
| CD36 | CD36 molecule (thrombospondin receptor) |
| CELF2 | CUGBP, Elav-like family member 2 |
| CERS6 | ceramide synthase 6 |
| CHMP4A | charged multivesicular body protein 4A |
| CRABP2 | cellular retinoic acid binding protein 2 |
| CTGF | connective tissue growth factor |
| CYR61 | cysteine-rich, angiogenic inducer, 61 |
| DKK3 | dickkopf WNT signaling pathway inhibitor 3 |
| EMP2 | epithelial membrane protein 2 |
| EPHX1 | epoxide hydrolase 1, microsomal (xenobiotic) |
| ETV1 | ets variant 1 |
| FABP4 | fatty acid binding protein 4, adipocyte |
| FHOD3 | formin homology 2 domain containing 3 |
| FST | follistatin |
| FZD7 | frizzled class receptor 7 |
| GAS6 | growth arrest-specific 6 |
| GATA3 | GATA binding protein 3 |
| GATA6 | GATA binding protein 6 |
| GJA1 | gap junction protein, alpha 1, 43kDa |
| GSE1 | Gse1 coiled-coil protein |
| GSTA1 | glutathione S-transferase alpha 1 |
| HLA-DPA1 | major histocompatibility complex, class II, DP alpha 1 |
| HLA-DQA1 | major histocompatibility complex, class II, DQ alpha 1 |
| HMOX1 | heme oxygenase 1 |
| HOXB2 | homeobox B2 |
| IFNAR1 | interferon (alpha, beta and omega) receptor 1 |
| IGFBP2 | insulin-like growth factor binding protein 2, 36kDa |
| IGFBP5 | insulin-like growth factor binding protein 5 |
| IGLV3-19 | immunoglobulin lambda variable 3-19 |
| IPO13 | importin 13 |
| KCNK3 | potassium channel, two pore domain subfamily K, member 3 |
| KRT19 | keratin 19, type I |
| LAMP3 | lysosomal-associated membrane protein 3 |
| LGALS3 | lectin, galactoside-binding, soluble, 3 |
| MAT2A | methionine adenosyltransferase II, alpha |
| NID1 | nidogen 1 |
| NRN1 | neuritin 1 |
| PBX1 | pre-B-cell leukemia homeobox 1 |
| PEG10 | paternally expressed 10 |
| PTGDS | prostaglandin D2 synthase 21kDa (brain) |
| RTN2 | reticulon 2 |
| S100A14 | S100 calcium binding protein A14 |
| SERPINF1 | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 |
| SLC38A1 | solute carrier family 38, member 1 |
| SLC7A7 | solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 |
| SPON2 | spondin 2, extracellular matrix protein |
| STAB1 | stabilin 1 |
| TFPI2 | tissue factor pathway inhibitor 2 |
| TLE2 | transducin-like enhancer of split 2 |
| TXNRD1 | thioredoxin reductase 1 |
| VAMP1 | vesicle-associated membrane protein 1 (synaptobrevin 1) |
| Symbol | Name |
|---|---|
| ABAT | 4-aminobutyrate aminotransferase |
| ACTG2 | actin, gamma 2, smooth muscle, enteric |
| ADGRA3 | adhesion G protein-coupled receptor A3 |
| ADGRG6 | adhesion G protein-coupled receptor G6 |
| ANKRD10 | ankyrin repeat domain 10 |
| ATP6V0E2 | ATPase, H+ transporting V0 subunit e2 |
| ATP8A1 | ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 |
| BCL6 | B-cell CLL/lymphoma 6 |
| CAMSAP2 | calmodulin regulated spectrin-associated protein family, member 2 |
| CASP2 | caspase 2, apoptosis-related cysteine peptidase |
| CCDC86 | coiled-coil domain containing 86 |
| CD59 | CD59 molecule, complement regulatory protein |
| CDC25A | cell division cycle 25A |
| CDC42 | cell division cycle 42 |
| CDKN1B | cyclin-dependent kinase inhibitor 1B (p27, Kip1) |
| CDKN1C | cyclin-dependent kinase inhibitor 1C (p57, Kip2) |
| CLU | clusterin |
| COL3A1 | collagen, type III, alpha 1 |
| CPS1 | carbamoyl-phosphate synthase 1, mitochondrial |
| CSRP1 | cysteine and glycine-rich protein 1 |
| CST3 | cystatin C |
| CXCL13 | chemokine (C-X-C motif) ligand 13 |
| CYB5R1 | cytochrome b5 reductase 1 |
| DBN1 | drebrin 1 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| DNAJB6 | DnaJ (Hsp40) homolog, subfamily B, member 6 |
| EIF5A | eukaryotic translation initiation factor 5A |
| FABP5 | fatty acid binding protein 5 (psoriasis-associated) |
| FOLR1 | folate receptor 1 (adult) |
| FXYD5 | FXYD domain containing ion transport regulator 5 |
| HSPA6 | heat shock 70kDa protein 6 (HSP70B') |
| HSPH1 | heat shock 105kDa/110kDa protein 1 |
| IFITM1 | interferon induced transmembrane protein 1 |
| IFITM2 | interferon induced transmembrane protein 2 |
| IFITM3 | interferon induced transmembrane protein 3 |
| IKZF1 | IKAROS family zinc finger 1 (Ikaros) |
| LYZ | lysozyme |
| MARCKSL1 | MARCKS-like 1 |
| NAV2 | neuron navigator 2 |
| NFATC3 | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 |
| PAN2 | PAN2 poly(A) specific ribonuclease subunit |
| PEBP1 | phosphatidylethanolamine binding protein 1 |
| PIK3R1 | phosphoinositide-3-kinase, regulatory subunit 1 (alpha) |
| PLA2G4A | phospholipase A2, group IVA (cytosolic, calcium-dependent) |
| PLEKHB1 | pleckstrin homology domain containing, family B (evectins) member 1 |
| PLSCR3 | phospholipid scramblase 3 |
| POLR2I | polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa |
| PSENEN | presenilin enhancer gamma secretase subunit |
| QDPR | quinoid dihydropteridine reductase |
| RPS21 | ribosomal protein S21 |
| SACS | sacsin molecular chaperone |
| SCML1 | sex comb on midleg-like 1 (Drosophila) |
| SRC | SRC proto-oncogene, non-receptor tyrosine kinase |
| SRSF6 | serine/arginine-rich splicing factor 6 |
| STK39 | serine threonine kinase 39 |
| TAX1BP3 | Tax1 (human T-cell leukemia virus type I) binding protein 3 |
| TBCB | tubulin folding cofactor B |
| TEX10 | testis expressed 10 |
| TJP2 | tight junction protein 2 |
| TLE1 | transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) |
| TM4SF1 | transmembrane 4 L six family member 1 |
| TNFRSF10B | tumor necrosis factor receptor superfamily, member 10b |
| UCHL1 | ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) |
| WDR1 | WD repeat domain 1 |
| YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon |
