| Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
| Similar Terms | |
| Downloads & Tools |
133 genes differentially expressed following the BRD-K64634304_Retinoic acid_SKMEL28_6.0_h_40.0_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| 1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
| ABL1 | ABL proto-oncogene 1, non-receptor tyrosine kinase |
| AKR1C1 | aldo-keto reductase family 1, member C1 |
| AKR1C2 | aldo-keto reductase family 1, member C2 |
| AKR1C3 | aldo-keto reductase family 1, member C3 |
| ALOX5AP | arachidonate 5-lipoxygenase-activating protein |
| ARNT2 | aryl-hydrocarbon receptor nuclear translocator 2 |
| BANK1 | B-cell scaffold protein with ankyrin repeats 1 |
| CAST | calpastatin |
| CD40 | CD40 molecule, TNF receptor superfamily member 5 |
| COL4A1 | collagen, type IV, alpha 1 |
| COLEC12 | collectin sub-family member 12 |
| CPE | carboxypeptidase E |
| CRABP1 | cellular retinoic acid binding protein 1 |
| CRABP2 | cellular retinoic acid binding protein 2 |
| CXCL5 | chemokine (C-X-C motif) ligand 5 |
| CYBB | cytochrome b-245, beta polypeptide |
| CYP4B1 | cytochrome P450, family 4, subfamily B, polypeptide 1 |
| DLK1 | delta-like 1 homolog (Drosophila) |
| DOK5 | docking protein 5 |
| DPYSL3 | dihydropyrimidinase-like 3 |
| ELANE | elastase, neutrophil expressed |
| EPAS1 | endothelial PAS domain protein 1 |
| FAM198B | family with sequence similarity 198, member B |
| FGFR2 | fibroblast growth factor receptor 2 |
| GNLY | granulysin |
| HBB | hemoglobin, beta |
| HLA-DQA1 | major histocompatibility complex, class II, DQ alpha 1 |
| HMOX1 | heme oxygenase 1 |
| HYOU1 | hypoxia up-regulated 1 |
| IKZF1 | IKAROS family zinc finger 1 (Ikaros) |
| IL1R1 | interleukin 1 receptor, type I |
| IPO13 | importin 13 |
| KRT19 | keratin 19, type I |
| LOC100272216 | uncharacterized LOC100272216 |
| MAN1A1 | mannosidase, alpha, class 1A, member 1 |
| MMP2 | matrix metallopeptidase 2 |
| MT1M | metallothionein 1M |
| NCAPD2 | non-SMC condensin I complex, subunit D2 |
| NFATC3 | nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3 |
| PAPD7 | PAP associated domain containing 7 |
| PCSK1 | proprotein convertase subtilisin/kexin type 1 |
| PDE10A | phosphodiesterase 10A |
| PTGS1 | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| PXDN | peroxidasin |
| RGS5 | regulator of G-protein signaling 5 |
| SERPINA1 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 |
| SHC1 | SHC (Src homology 2 domain containing) transforming protein 1 |
| SLC7A7 | solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 |
| SLCO3A1 | solute carrier organic anion transporter family, member 3A1 |
| SPOCK1 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 |
| TBX3 | T-box 3 |
| TGFBI | transforming growth factor, beta-induced, 68kDa |
| TLR4 | toll-like receptor 4 |
| TMEM158 | transmembrane protein 158 (gene/pseudogene) |
| TMEM30B | transmembrane protein 30B |
| TNFRSF21 | tumor necrosis factor receptor superfamily, member 21 |
| TPD52 | tumor protein D52 |
| XIST | X inactive specific transcript (non-protein coding) |
| ZHX2 | zinc fingers and homeoboxes 2 |
| ZNF117 | zinc finger protein 117 |
| ZNF586 | zinc finger protein 586 |
| Symbol | Name |
|---|---|
| ADCY1 | adenylate cyclase 1 (brain) |
| AGT | angiotensinogen (serpin peptidase inhibitor, clade A, member 8) |
| AK1 | adenylate kinase 1 |
| AREG | amphiregulin |
| ASAH1 | N-acylsphingosine amidohydrolase (acid ceramidase) 1 |
| BST2 | bone marrow stromal cell antigen 2 |
| C7 | complement component 7 |
| CCNF | cyclin F |
| CD59 | CD59 molecule, complement regulatory protein |
| CHCHD7 | coiled-coil-helix-coiled-coil-helix domain containing 7 |
| CITED2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
| CLEC11A | C-type lectin domain family 11, member A |
| CTSH | cathepsin H |
| DAPK1 | death-associated protein kinase 1 |
| DDX3Y | DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
| DEFB1 | defensin, beta 1 |
| DUSP10 | dual specificity phosphatase 10 |
| DUSP2 | dual specificity phosphatase 2 |
| DUSP6 | dual specificity phosphatase 6 |
| ECM1 | extracellular matrix protein 1 |
| FABP7 | fatty acid binding protein 7, brain |
| FAM216A | family with sequence similarity 216, member A |
| FOLR1 | folate receptor 1 (adult) |
| FXYD2 | FXYD domain containing ion transport regulator 2 |
| FXYD5 | FXYD domain containing ion transport regulator 5 |
| GATM | glycine amidinotransferase (L-arginine:glycine amidinotransferase) |
| GGH | gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase) |
| GLDC | glycine dehydrogenase (decarboxylating) |
| GRB14 | growth factor receptor-bound protein 14 |
| HLF | hepatic leukemia factor |
| HLTF | helicase-like transcription factor |
| HPGD | hydroxyprostaglandin dehydrogenase 15-(NAD) |
| HPRT1 | hypoxanthine phosphoribosyltransferase 1 |
| ID4 | inhibitor of DNA binding 4, dominant negative helix-loop-helix protein |
| KDELR3 | KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 |
| LGALS3 | lectin, galactoside-binding, soluble, 3 |
| LPL | lipoprotein lipase |
| LZTFL1 | leucine zipper transcription factor-like 1 |
| MATN2 | matrilin 2 |
| MBP | myelin basic protein |
| MCOLN1 | mucolipin 1 |
| MET | MET proto-oncogene, receptor tyrosine kinase |
| NFIB | nuclear factor I/B |
| NOV | nephroblastoma overexpressed |
| NPY1R | neuropeptide Y receptor Y1 |
| NRN1 | neuritin 1 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 |
| NUDT4 | nudix (nucleoside diphosphate linked moiety X)-type motif 4 |
| PAN2 | PAN2 poly(A) specific ribonuclease subunit |
| PLP1 | proteolipid protein 1 |
| PRKCH | protein kinase C, eta |
| PSIP1 | PC4 and SFRS1 interacting protein 1 |
| PTER | phosphotriesterase related |
| PTN | pleiotrophin |
| PXMP2 | peroxisomal membrane protein 2, 22kDa |
| RGS1 | regulator of G-protein signaling 1 |
| RPIA | ribose 5-phosphate isomerase A |
| RPL38 | ribosomal protein L38 |
| RPS11 | ribosomal protein S11 |
| SATB1 | SATB homeobox 1 |
| SLC27A2 | solute carrier family 27 (fatty acid transporter), member 2 |
| SLC47A1 | solute carrier family 47 (multidrug and toxin extrusion), member 1 |
| SLPI | secretory leukocyte peptidase inhibitor |
| SORBS1 | sorbin and SH3 domain containing 1 |
| SOX4 | SRY (sex determining region Y)-box 4 |
| TCFL5 | transcription factor-like 5 (basic helix-loop-helix) |
| TCN1 | transcobalamin I (vitamin B12 binding protein, R binder family) |
| TFAP2A | transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) |
| TGFBR2 | transforming growth factor, beta receptor II (70/80kDa) |
| TNC | tenascin C |
| TSPAN3 | tetraspanin 3 |
