Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
Category | transcriptomics |
Type | small molecule perturbation |
Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
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299 genes differentially expressed following the BRD-K72414522_AZD-5438_MCF10A_24_h_3.33_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
Symbol | Name |
---|---|
1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
ABCC3 | ATP-binding cassette, sub-family C (CFTR/MRP), member 3 |
ABCG2 | ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) |
ACKR3 | atypical chemokine receptor 3 |
AGR2 | anterior gradient 2 |
AHNAK2 | AHNAK nucleoprotein 2 |
AKR1B10 | aldo-keto reductase family 1, member B10 (aldose reductase) |
AKR1C1 | aldo-keto reductase family 1, member C1 |
AKR1C2 | aldo-keto reductase family 1, member C2 |
AKR1C3 | aldo-keto reductase family 1, member C3 |
ALDH3A2 | aldehyde dehydrogenase 3 family, member A2 |
ALDH3B2 | aldehyde dehydrogenase 3 family, member B2 |
ANKRD10 | ankyrin repeat domain 10 |
ANXA9 | annexin A9 |
ARL4C | ADP-ribosylation factor-like 4C |
ASS1 | argininosuccinate synthase 1 |
ATP2B1 | ATPase, Ca++ transporting, plasma membrane 1 |
BCL6 | B-cell CLL/lymphoma 6 |
BIRC3 | baculoviral IAP repeat containing 3 |
BLVRB | biliverdin reductase B |
C1R | complement component 1, r subcomponent |
C2CD2 | C2 calcium-dependent domain containing 2 |
C3 | complement component 3 |
CA12 | carbonic anhydrase XII |
CD300A | CD300a molecule |
CD52 | CD52 molecule |
CDKN1A | cyclin-dependent kinase inhibitor 1A (p21, Cip1) |
CFB | complement factor B |
CHST15 | carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 |
CLEC3B | C-type lectin domain family 3, member B |
CLU | clusterin |
COLEC12 | collectin sub-family member 12 |
CPT1A | carnitine palmitoyltransferase 1A (liver) |
CYB561 | cytochrome b561 |
CYB5R1 | cytochrome b5 reductase 1 |
DACH1 | dachshund family transcription factor 1 |
DDR1 | discoidin domain receptor tyrosine kinase 1 |
DDX41 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 |
DNAJB6 | DnaJ (Hsp40) homolog, subfamily B, member 6 |
DPT | dermatopontin |
DSP | desmoplakin |
EEF1A2 | eukaryotic translation elongation factor 1 alpha 2 |
EFNA1 | ephrin-A1 |
EMC3 | ER membrane protein complex subunit 3 |
EPHX1 | epoxide hydrolase 1, microsomal (xenobiotic) |
EPM2AIP1 | EPM2A (laforin) interacting protein 1 |
ESR2 | estrogen receptor 2 (ER beta) |
ETFB | electron-transfer-flavoprotein, beta polypeptide |
F13A1 | coagulation factor XIII, A1 polypeptide |
FAM107A | family with sequence similarity 107, member A |
FAM127A | family with sequence similarity 127, member A |
FBLN1 | fibulin 1 |
FOLR1 | folate receptor 1 (adult) |
GDF15 | growth differentiation factor 15 |
GJA1 | gap junction protein, alpha 1, 43kDa |
GPC1 | glypican 1 |
GPM6B | glycoprotein M6B |
GSN | gelsolin |
GUCY1A3 | guanylate cyclase 1, soluble, alpha 3 |
H2BFS | H2B histone family, member S (pseudogene) |
HADHA | hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit |
HIST1H1C | histone cluster 1, H1c |
HIST1H2AC | histone cluster 1, H2ac |
HIST1H2BD | histone cluster 1, H2bd |
HIST1H2BK | histone cluster 1, H2bk |
HIST1H3H | histone cluster 1, H3h |
HLA-C | major histocompatibility complex, class I, C |
HMOX1 | heme oxygenase 1 |
HSPA6 | heat shock 70kDa protein 6 (HSP70B') |
HSPB8 | heat shock 22kDa protein 8 |
IFI27 | interferon, alpha-inducible protein 27 |
IFITM1 | interferon induced transmembrane protein 1 |
IFNGR1 | interferon gamma receptor 1 |
IL32 | interleukin 32 |
ITFG1 | integrin alpha FG-GAP repeat containing 1 |
JAM2 | junctional adhesion molecule 2 |
KIAA0125 | KIAA0125 |
KLF10 | Kruppel-like factor 10 |
KLF4 | Kruppel-like factor 4 (gut) |
KRT8 | keratin 8, type II |
L1CAM | L1 cell adhesion molecule |
LAMB2 | laminin, beta 2 (laminin S) |
LGALS3BP | lectin, galactoside-binding, soluble, 3 binding protein |
MFAP5 | microfibrillar associated protein 5 |
MMD | monocyte to macrophage differentiation-associated |
MMP7 | matrix metallopeptidase 7 |
MSX2 | msh homeobox 2 |
MUC16 | mucin 16, cell surface associated |
MXRA5 | matrix-remodelling associated 5 |
NACC2 | NACC family member 2, BEN and BTB (POZ) domain containing |
NFKBIA | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha |
NQO1 | NAD(P)H dehydrogenase, quinone 1 |
NRCAM | neuronal cell adhesion molecule |
NUP210 | nucleoporin 210kDa |
NUPR1 | nuclear protein, transcriptional regulator, 1 |
OLFM1 | olfactomedin 1 |
OLFML2A | olfactomedin-like 2A |
P4HA2 | prolyl 4-hydroxylase, alpha polypeptide II |
P4HTM | prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) |
PAK6 | p21 protein (Cdc42/Rac)-activated kinase 6 |
PDXK | pyridoxal (pyridoxine, vitamin B6) kinase |
PDZK1IP1 | PDZK1 interacting protein 1 |
PEG10 | paternally expressed 10 |
PHF20 | PHD finger protein 20 |
PI3 | peptidase inhibitor 3, skin-derived |
PIK3C2B | phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta |
PLXNB2 | plexin B2 |
PON2 | paraoxonase 2 |
PPAP2B | phosphatidic acid phosphatase type 2B |
PPL | periplakin |
PRKACB | protein kinase, cAMP-dependent, catalytic, beta |
PRSS8 | protease, serine, 8 |
PSMB8 | proteasome (prosome, macropain) subunit, beta type, 8 |
RASSF2 | Ras association (RalGDS/AF-6) domain family member 2 |
RNASE1 | ribonuclease, RNase A family, 1 (pancreatic) |
RNASET2 | ribonuclease T2 |
RSL1D1 | ribosomal L1 domain containing 1 |
S100A7 | S100 calcium binding protein A7 |
SAT1 | spermidine/spermine N1-acetyltransferase 1 |
SCUBE2 | signal peptide, CUB domain, EGF-like 2 |
SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
SEPP1 | selenoprotein P, plasma, 1 |
SFN | stratifin |
SGCE | sarcoglycan, epsilon |
SLC12A7 | solute carrier family 12 (potassium/chloride transporter), member 7 |
SLC16A1 | solute carrier family 16 (monocarboxylate transporter), member 1 |
SLC16A3 | solute carrier family 16 (monocarboxylate transporter), member 3 |
SLC2A1 | solute carrier family 2 (facilitated glucose transporter), member 1 |
SLC2A10 | solute carrier family 2 (facilitated glucose transporter), member 10 |
SLC46A3 | solute carrier family 46, member 3 |
SLPI | secretory leukocyte peptidase inhibitor |
SNN | stannin |
SPARCL1 | SPARC-like 1 (hevin) |
SPINK2 | serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor) |
SPINT1 | serine peptidase inhibitor, Kunitz type 1 |
SPON1 | spondin 1, extracellular matrix protein |
ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
STC2 | stanniocalcin 2 |
TFAP2A | transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) |
TLE1 | transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila) |
TM4SF1 | transmembrane 4 L six family member 1 |
TM9SF4 | transmembrane 9 superfamily protein member 4 |
TMEM45A | transmembrane protein 45A |
TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
TPD52L1 | tumor protein D52-like 1 |
TPGS2 | tubulin polyglutamylase complex subunit 2 |
TPP1 | tripeptidyl peptidase I |
TRIM16 | tripartite motif containing 16 |
TSC22D3 | TSC22 domain family, member 3 |
TSKU | tsukushi, small leucine rich proteoglycan |
TSPAN1 | tetraspanin 1 |
VCAM1 | vascular cell adhesion molecule 1 |
WWC1 | WW and C2 domain containing 1 |
ZKSCAN1 | zinc finger with KRAB and SCAN domains 1 |
ZNF423 | zinc finger protein 423 |
ZNF91 | zinc finger protein 91 |
Symbol | Name |
---|---|
ACSL3 | acyl-CoA synthetase long-chain family member 3 |
ADI1 | acireductone dioxygenase 1 |
AMIGO2 | adhesion molecule with Ig-like domain 2 |
ANP32E | acidic (leucine-rich) nuclear phosphoprotein 32 family, member E |
ANPEP | alanyl (membrane) aminopeptidase |
APOBEC3B | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B |
ARHGDIB | Rho GDP dissociation inhibitor (GDI) beta |
ASPM | asp (abnormal spindle) homolog, microcephaly associated (Drosophila) |
ATF1 | activating transcription factor 1 |
ATF5 | activating transcription factor 5 |
ATP2C1 | ATPase, Ca++ transporting, type 2C, member 1 |
AURKA | aurora kinase A |
AURKB | aurora kinase B |
BCLAF1 | BCL2-associated transcription factor 1 |
BIRC5 | baculoviral IAP repeat containing 5 |
BUB1 | BUB1 mitotic checkpoint serine/threonine kinase |
BUB3 | BUB3 mitotic checkpoint protein |
C4BPA | complement component 4 binding protein, alpha |
CALR | calreticulin |
CCNA2 | cyclin A2 |
CCNB2 | cyclin B2 |
CCNF | cyclin F |
CDC20 | cell division cycle 20 |
CDCA3 | cell division cycle associated 3 |
CDCA8 | cell division cycle associated 8 |
CDK1 | cyclin-dependent kinase 1 |
CDKN3 | cyclin-dependent kinase inhibitor 3 |
CENPA | centromere protein A |
CENPE | centromere protein E, 312kDa |
CENPF | centromere protein F, 350/400kDa |
CENPN | centromere protein N |
CENPU | centromere protein U |
CEP55 | centrosomal protein 55kDa |
CIT | citron rho-interacting serine/threonine kinase |
CKAP4 | cytoskeleton-associated protein 4 |
CKS2 | CDC28 protein kinase regulatory subunit 2 |
CLC | Charcot-Leyden crystal galectin |
CPNE3 | copine III |
CSE1L | CSE1 chromosome segregation 1-like (yeast) |
CTNNAL1 | catenin (cadherin-associated protein), alpha-like 1 |
CXCL9 | chemokine (C-X-C motif) ligand 9 |
CYP4F3 | cytochrome P450, family 4, subfamily F, polypeptide 3 |
CYR61 | cysteine-rich, angiogenic inducer, 61 |
DDAH1 | dimethylarginine dimethylaminohydrolase 1 |
DEPDC1 | DEP domain containing 1 |
DLC1 | DLC1 Rho GTPase activating protein |
DLGAP5 | discs, large (Drosophila) homolog-associated protein 5 |
DOCK4 | dedicator of cytokinesis 4 |
EGR1 | early growth response 1 |
EIF1AX | eukaryotic translation initiation factor 1A, X-linked |
EIF5A | eukaryotic translation initiation factor 5A |
ENPP2 | ectonucleotide pyrophosphatase/phosphodiesterase 2 |
ESPL1 | extra spindle pole bodies homolog 1 (S. cerevisiae) |
FAM64A | family with sequence similarity 64, member A |
FGF13 | fibroblast growth factor 13 |
FOXM1 | forkhead box M1 |
G3BP1 | GTPase activating protein (SH3 domain) binding protein 1 |
GSTO1 | glutathione S-transferase omega 1 |
GTPBP8 | GTP-binding protein 8 (putative) |
GTSE1 | G-2 and S-phase expressed 1 |
GYG1 | glycogenin 1 |
GZMK | granzyme K (granzyme 3; tryptase II) |
H2AFX | H2A histone family, member X |
HIST1H4C | histone cluster 1, H4c |
HJURP | Holliday junction recognition protein |
HMGB1 | high mobility group box 1 |
HMGB2 | high mobility group box 2 |
HMMR | hyaluronan-mediated motility receptor (RHAMM) |
HNRNPA0 | heterogeneous nuclear ribonucleoprotein A0 |
HNRNPA3 | heterogeneous nuclear ribonucleoprotein A3 |
HNRNPD | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) |
HOXC6 | homeobox C6 |
HPRT1 | hypoxanthine phosphoribosyltransferase 1 |
IDI1 | isopentenyl-diphosphate delta isomerase 1 |
IGFBP7 | insulin-like growth factor binding protein 7 |
IGHM | immunoglobulin heavy constant mu |
IL13RA2 | interleukin 13 receptor, alpha 2 |
IL1B | interleukin 1, beta |
IL7R | interleukin 7 receptor |
ITGA6 | integrin, alpha 6 |
ITM2A | integral membrane protein 2A |
KIF14 | kinesin family member 14 |
KIF20A | kinesin family member 20A |
KIF23 | kinesin family member 23 |
KIF4A | kinesin family member 4A |
LAMP5 | lysosomal-associated membrane protein family, member 5 |
LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) |
LBR | lamin B receptor |
MAD2L1 | MAD2 mitotic arrest deficient-like 1 (yeast) |
MARCKSL1 | MARCKS-like 1 |
MCM5 | minichromosome maintenance complex component 5 |
MICALL1 | MICAL-like 1 |
MKI67 | marker of proliferation Ki-67 |
MMP9 | matrix metallopeptidase 9 |
MS4A3 | membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific) |
NBN | nibrin |
NCAPG | non-SMC condensin I complex, subunit G |
NDC80 | NDC80 kinetochore complex component |
NEK2 | NIMA-related kinase 2 |
NEK7 | NIMA-related kinase 7 |
NPY | neuropeptide Y |
NTS | neurotensin |
NUSAP1 | nucleolar and spindle associated protein 1 |
OSBPL8 | oxysterol binding protein-like 8 |
PAIP1 | poly(A) binding protein interacting protein 1 |
PBK | PDZ binding kinase |
PLK1 | polo-like kinase 1 |
POLE2 | polymerase (DNA directed), epsilon 2, accessory subunit |
PRC1 | protein regulator of cytokinesis 1 |
PRPS2 | phosphoribosyl pyrophosphate synthetase 2 |
PTTG1 | pituitary tumor-transforming 1 |
RACGAP1 | Rac GTPase activating protein 1 |
RGS2 | regulator of G-protein signaling 2 |
SEPHS1 | selenophosphate synthetase 1 |
SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 |
SGK1 | serum/glucocorticoid regulated kinase 1 |
SKP1 | S-phase kinase-associated protein 1 |
SLC37A4 | solute carrier family 37 (glucose-6-phosphate transporter), member 4 |
SLIT2 | slit homolog 2 (Drosophila) |
SMAGP | small cell adhesion glycoprotein |
SMC4 | structural maintenance of chromosomes 4 |
SMS | spermine synthase |
SMYD2 | SET and MYND domain containing 2 |
SNRPB | small nuclear ribonucleoprotein polypeptides B and B1 |
SNRPG | small nuclear ribonucleoprotein polypeptide G |
SPARC | secreted protein, acidic, cysteine-rich (osteonectin) |
SPC25 | SPC25, NDC80 kinetochore complex component |
SRSF3 | serine/arginine-rich splicing factor 3 |
STMN1 | stathmin 1 |
SYNCRIP | synaptotagmin binding, cytoplasmic RNA interacting protein |
TACC3 | transforming, acidic coiled-coil containing protein 3 |
TCN1 | transcobalamin I (vitamin B12 binding protein, R binder family) |
TMEM50A | transmembrane protein 50A |
TMPO | thymopoietin |
TOP2A | topoisomerase (DNA) II alpha 170kDa |
TPX2 | TPX2, microtubule-associated |
TTK | TTK protein kinase |
TUSC3 | tumor suppressor candidate 3 |
TWF1 | twinfilin actin binding protein 1 |
UAP1 | UDP-N-acetylglucosamine pyrophosphorylase 1 |
UBE2C | ubiquitin-conjugating enzyme E2C |
UBE2S | ubiquitin-conjugating enzyme E2S |
WNT5A | wingless-type MMTV integration site family, member 5A |