| Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
| Similar Terms | |
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84 genes differentially expressed following the BRD-K82928847_rocilinostat_HEPG2_24_h_3.33_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| 1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
| AHNAK | AHNAK nucleoprotein |
| ARL3 | ADP-ribosylation factor-like 3 |
| ARL6IP5 | ADP-ribosylation factor-like 6 interacting protein 5 |
| ARMCX2 | armadillo repeat containing, X-linked 2 |
| CCND2 | cyclin D2 |
| CDC42 | cell division cycle 42 |
| CORO1C | coronin, actin binding protein, 1C |
| DAD1 | defender against cell death 1 |
| DNALI1 | dynein, axonemal, light intermediate chain 1 |
| DUSP6 | dual specificity phosphatase 6 |
| ESR1 | estrogen receptor 1 |
| EXOSC4 | exosome component 4 |
| FXYD6 | FXYD domain containing ion transport regulator 6 |
| GLOD4 | glyoxalase domain containing 4 |
| HERC6 | HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 |
| IFI6 | interferon, alpha-inducible protein 6 |
| IFIT1 | interferon-induced protein with tetratricopeptide repeats 1 |
| IRF9 | interferon regulatory factor 9 |
| ISG15 | ISG15 ubiquitin-like modifier |
| KRT7 | keratin 7, type II |
| LOC100505650 | uncharacterized LOC100505650 |
| LRP10 | low density lipoprotein receptor-related protein 10 |
| MMP7 | matrix metallopeptidase 7 |
| NFKBIB | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta |
| PALLD | palladin, cytoskeletal associated protein |
| PHLDA2 | pleckstrin homology-like domain, family A, member 2 |
| PIH1D1 | PIH1 domain containing 1 |
| PTN | pleiotrophin |
| RBP1 | retinol binding protein 1, cellular |
| RPL27A | ribosomal protein L27a |
| RPS11 | ribosomal protein S11 |
| S100A6 | S100 calcium binding protein A6 |
| SCGB2A1 | secretoglobin, family 2A, member 1 |
| SCGB2A2 | secretoglobin, family 2A, member 2 |
| SERINC5 | serine incorporator 5 |
| SERPINA3 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 |
| SLC39A6 | solute carrier family 39 (zinc transporter), member 6 |
| SOX11 | SRY (sex determining region Y)-box 11 |
| SPON1 | spondin 1, extracellular matrix protein |
| TACSTD2 | tumor-associated calcium signal transducer 2 |
| TFF1 | trefoil factor 1 |
| TGM2 | transglutaminase 2 |
| TNC | tenascin C |
| TUBA1A | tubulin, alpha 1a |
| WBP1L | WW domain binding protein 1-like |
| WNT5A | wingless-type MMTV integration site family, member 5A |
| XIST | X inactive specific transcript (non-protein coding) |
| ZFP36L2 | ZFP36 ring finger protein-like 2 |
| Symbol | Name |
|---|---|
| ADI1 | acireductone dioxygenase 1 |
| AKT1 | v-akt murine thymoma viral oncogene homolog 1 |
| ALDH5A1 | aldehyde dehydrogenase 5 family, member A1 |
| APOBEC3A | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A |
| ATMIN | ATM interactor |
| C1ORF115 | chromosome 1 open reading frame 115 |
| C2CD5 | C2 calcium-dependent domain containing 5 |
| CDKN2C | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) |
| CEACAM6 | carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) |
| CEBPA | CCAAT/enhancer binding protein (C/EBP), alpha |
| CSTA | cystatin A (stefin A) |
| CTBP1 | C-terminal binding protein 1 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 |
| FAM129A | family with sequence similarity 129, member A |
| GABRE | gamma-aminobutyric acid (GABA) A receptor, epsilon |
| GPI | glucose-6-phosphate isomerase |
| HBB | hemoglobin, beta |
| HCAR3 | hydroxycarboxylic acid receptor 3 |
| IGKV4-1 | immunoglobulin kappa variable 4-1 |
| MEOX2 | mesenchyme homeobox 2 |
| MTCL1 | microtubule crosslinking factor 1 |
| NAMPT | nicotinamide phosphoribosyltransferase |
| NREP | neuronal regeneration related protein |
| PCSK6 | proprotein convertase subtilisin/kexin type 6 |
| PPBP | pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) |
| PPIC | peptidylprolyl isomerase C (cyclophilin C) |
| PROS1 | protein S (alpha) |
| PTK2 | protein tyrosine kinase 2 |
| RTN1 | reticulon 1 |
| S100A12 | S100 calcium binding protein A12 |
| S100A8 | S100 calcium binding protein A8 |
| SERPINA1 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 |
| SLC16A7 | solute carrier family 16 (monocarboxylate transporter), member 7 |
| VDAC1 | voltage-dependent anion channel 1 |
| VWF | von Willebrand factor |
