| Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
| Similar Terms | |
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77 genes differentially expressed following the BRD-K88378636_withaferin-a_HS578T_3_h_3.33_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| 1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
| ADCK3 | aarF domain containing kinase 3 |
| ANKRD10 | ankyrin repeat domain 10 |
| AQP1 | aquaporin 1 (Colton blood group) |
| ATF3 | activating transcription factor 3 |
| BAG3 | BCL2-associated athanogene 3 |
| BTG2 | BTG family, member 2 |
| C4BPA | complement component 4 binding protein, alpha |
| CD69 | CD69 molecule |
| CLDN10 | claudin 10 |
| DDIT4 | DNA-damage-inducible transcript 4 |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| EGR1 | early growth response 1 |
| EGR2 | early growth response 2 |
| HMOX1 | heme oxygenase 1 |
| HSPA1A | heat shock 70kDa protein 1A |
| HSPA6 | heat shock 70kDa protein 6 (HSP70B') |
| HSPH1 | heat shock 105kDa/110kDa protein 1 |
| IDS | iduronate 2-sulfatase |
| IER2 | immediate early response 2 |
| IER5 | immediate early response 5 |
| LYZ | lysozyme |
| MUC5B | mucin 5B, oligomeric mucus/gel-forming |
| NELL2 | NEL-like 2 (chicken) |
| NR4A1 | nuclear receptor subfamily 4, group A, member 1 |
| P2RX5 | purinergic receptor P2X, ligand gated ion channel, 5 |
| PITX1 | paired-like homeodomain 1 |
| PLAC8 | placenta-specific 8 |
| PMAIP1 | phorbol-12-myristate-13-acetate-induced protein 1 |
| PROM1 | prominin 1 |
| PTPRO | protein tyrosine phosphatase, receptor type, O |
| RGS1 | regulator of G-protein signaling 1 |
| SEL1L3 | sel-1 suppressor of lin-12-like 3 (C. elegans) |
| SFTPB | surfactant protein B |
| SLC5A3 | solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 |
| TPPP3 | tubulin polymerization-promoting protein family member 3 |
| UCP2 | uncoupling protein 2 (mitochondrial, proton carrier) |
| WFS1 | Wolfram syndrome 1 (wolframin) |
| ZFP36 | ZFP36 ring finger protein |
| ZNF185 | zinc finger protein 185 (LIM domain) |
| Symbol | Name |
|---|---|
| ADORA2B | adenosine A2b receptor |
| ARL4C | ADP-ribosylation factor-like 4C |
| BASP1 | brain abundant, membrane attached signal protein 1 |
| CCDC85B | coiled-coil domain containing 85B |
| CDH11 | cadherin 11, type 2, OB-cadherin (osteoblast) |
| CNN3 | calponin 3, acidic |
| CXCL1 | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) |
| DACH1 | dachshund family transcription factor 1 |
| EFEMP1 | EGF containing fibulin-like extracellular matrix protein 1 |
| EIF5A | eukaryotic translation initiation factor 5A |
| FAM171A1 | family with sequence similarity 171, member A1 |
| FXYD3 | FXYD domain containing ion transport regulator 3 |
| GJA1 | gap junction protein, alpha 1, 43kDa |
| GPRC5B | G protein-coupled receptor, class C, group 5, member B |
| GSTM3 | glutathione S-transferase mu 3 (brain) |
| H1F0 | H1 histone family, member 0 |
| HIST3H2A | histone cluster 3, H2a |
| HOXA10 | homeobox A10 |
| IGFBP2 | insulin-like growth factor binding protein 2, 36kDa |
| LAMA3 | laminin, alpha 3 |
| MAP7 | microtubule-associated protein 7 |
| MDK | midkine (neurite growth-promoting factor 2) |
| MECOM | MDS1 and EVI1 complex locus |
| MMP9 | matrix metallopeptidase 9 |
| NFKBIA | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha |
| NID2 | nidogen 2 (osteonidogen) |
| NTS | neurotensin |
| PDGFRA | platelet-derived growth factor receptor, alpha polypeptide |
| PIN1 | peptidylprolyl cis/trans isomerase, NIMA-interacting 1 |
| PSD3 | pleckstrin and Sec7 domain containing 3 |
| RAB13 | RAB13, member RAS oncogene family |
| S100A9 | S100 calcium binding protein A9 |
| SPP1 | secreted phosphoprotein 1 |
| ST6GALNAC2 | ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 |
| TIPARP | TCDD-inducible poly(ADP-ribose) polymerase |
| TNFAIP2 | tumor necrosis factor, alpha-induced protein 2 |
| UCHL1 | ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) |
