| Dataset | LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules |
| Category | transcriptomics |
| Type | small molecule perturbation |
| Description | small molecule perturbation identified as [perturbation ID]_[perturbagen]_[cell line]_[time]_[time unit]_[dose]_[dose unit] (LINCS L1000 Connectivity Map) |
| Similar Terms | |
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67 genes differentially expressed following the BRD-K88378636_withaferin-a_MCF7_3_h_1.11_um small molecule perturbation from the LINCS L1000 CMAP Signatures of Differentially Expressed Genes for Small Molecules dataset.
| Symbol | Name |
|---|---|
| 1060P11.3 | killer cell immunoglobulin-like receptor, three domains, pseudogene |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) |
| CHI3L1 | chitinase 3-like 1 (cartilage glycoprotein-39) |
| COL9A3 | collagen, type IX, alpha 3 |
| DHRS2 | dehydrogenase/reductase (SDR family) member 2 |
| DLK1 | delta-like 1 homolog (Drosophila) |
| DNAJB1 | DnaJ (Hsp40) homolog, subfamily B, member 1 |
| EGR1 | early growth response 1 |
| EGR3 | early growth response 3 |
| EPCAM | epithelial cell adhesion molecule |
| ETV5 | ets variant 5 |
| FCGBP | Fc fragment of IgG binding protein |
| FTH1 | ferritin, heavy polypeptide 1 |
| HMOX1 | heme oxygenase 1 |
| HOXC6 | homeobox C6 |
| HSPA1A | heat shock 70kDa protein 1A |
| HSPA6 | heat shock 70kDa protein 6 (HSP70B') |
| IER2 | immediate early response 2 |
| IKZF1 | IKAROS family zinc finger 1 (Ikaros) |
| JUN | jun proto-oncogene |
| PDPN | podoplanin |
| PKIA | protein kinase (cAMP-dependent, catalytic) inhibitor alpha |
| PLSCR3 | phospholipid scramblase 3 |
| PON3 | paraoxonase 3 |
| RRAS2 | related RAS viral (r-ras) oncogene homolog 2 |
| SCG5 | secretogranin V |
| SERPINA1 | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 |
| SGCB | sarcoglycan, beta (43kDa dystrophin-associated glycoprotein) |
| SRPX | sushi-repeat containing protein, X-linked |
| XIST | X inactive specific transcript (non-protein coding) |
| Symbol | Name |
|---|---|
| ACKR3 | atypical chemokine receptor 3 |
| BTBD3 | BTB (POZ) domain containing 3 |
| CEACAM6 | carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) |
| CST1 | cystatin SN |
| CXCL5 | chemokine (C-X-C motif) ligand 5 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 |
| DDX3Y | DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked |
| EIF1AY | eukaryotic translation initiation factor 1A, Y-linked |
| EREG | epiregulin |
| FERMT1 | fermitin family member 1 |
| FIS1 | fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae) |
| HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1 |
| HP | haptoglobin |
| IL1RN | interleukin 1 receptor antagonist |
| KDM5D | lysine (K)-specific demethylase 5D |
| KRT13 | keratin 13, type I |
| KRT17 | keratin 17, type I |
| KRT23 | keratin 23, type I |
| KRT6A | keratin 6A, type II |
| MSMO1 | methylsterol monooxygenase 1 |
| MYH11 | myosin, heavy chain 11, smooth muscle |
| PI3 | peptidase inhibitor 3, skin-derived |
| PLAGL1 | pleiomorphic adenoma gene-like 1 |
| PSMB8 | proteasome (prosome, macropain) subunit, beta type, 8 |
| RPS4Y1 | ribosomal protein S4, Y-linked 1 |
| S100A2 | S100 calcium binding protein A2 |
| S100A7 | S100 calcium binding protein A7 |
| SERPINB3 | serpin peptidase inhibitor, clade B (ovalbumin), member 3 |
| SLC26A2 | solute carrier family 26 (anion exchanger), member 2 |
| SOX4 | SRY (sex determining region Y)-box 4 |
| SPRR1A | small proline-rich protein 1A |
| SPRR1B | small proline-rich protein 1B |
| SPRR3 | small proline-rich protein 3 |
| SYT1 | synaptotagmin I |
| TMEM45A | transmembrane protein 45A |
| TMEM47 | transmembrane protein 47 |
| TSPAN1 | tetraspanin 1 |
