Belinostat_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Belinostat perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Belinostat_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.147914
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.116772
CANX calnexin 0.0843568
LOX lysyl oxidase 0.0791264
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0760906
IGFBP3 insulin-like growth factor binding protein 3 0.0732181
FBN1 fibrillin 1 0.0697966
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0647472
TRIO trio Rho guanine nucleotide exchange factor 0.0626855
COL5A2 collagen, type V, alpha 2 0.0615043
SLC39A11 solute carrier family 39, member 11 0.060748
LOXL2 lysyl oxidase-like 2 0.0585412
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0549991
NAV1 neuron navigator 1 0.0523173
AHNAK AHNAK nucleoprotein 0.0516549
FBXL7 F-box and leucine-rich repeat protein 7 0.0515248
AUTS2 autism susceptibility candidate 2 0.0481999
RSAD2 radical S-adenosyl methionine domain containing 2 0.0455963
SEPTIN9 septin 9 0.045411
THBS2 thrombospondin 2 0.0448706
COPA coatomer protein complex, subunit alpha 0.0418483
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0394799
COL5A1 collagen, type V, alpha 1 0.0390632
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0360495
OGA O-GlcNAcase 0.0348581
APP amyloid beta (A4) precursor protein 0.0346492
HDAC9 histone deacetylase 9 0.0340997
ANXA2 annexin A2 0.0339258
MAP1B microtubule-associated protein 1B 0.0330611
FNDC3B fibronectin type III domain containing 3B 0.0328476
COL8A1 collagen, type VIII, alpha 1 0.032778
TNIP1 TNFAIP3 interacting protein 1 0.0318792
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0317617
SOD2 superoxide dismutase 2, mitochondrial 0.0311413
ZEB1 zinc finger E-box binding homeobox 1 0.03112
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0310149
ZEB2 zinc finger E-box binding homeobox 2 0.0309723
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0309432
TPM4 tropomyosin 4 0.0308954
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0305876
CDH13 cadherin 13 0.0304414
DST dystonin 0.0304395
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0302814
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0302756
EGFR epidermal growth factor receptor 0.0287523
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0284923
ANKRD36 ankyrin repeat domain 36 0.0284249
BACE2 beta-site APP-cleaving enzyme 2 0.0277213
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 0.0272783
DLG1 discs, large homolog 1 (Drosophila) 0.0259043
YEATS2 YEATS domain containing 2 0.0258993
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0257954
ITSN2 intersectin 2 0.025738
GOLGA2 golgin A2 0.0255485
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0253521
FNIP1 folliculin interacting protein 1 0.025286
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0248177
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0247061
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0246931
WDFY1 WD repeat and FYVE domain containing 1 0.0244736
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0242112
IQGAP1 IQ motif containing GTPase activating protein 1 0.0241162
SBF2 SET binding factor 2 0.0240899
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0238875
PBX3 pre-B-cell leukemia homeobox 3 0.0238651
PODXL podocalyxin-like 0.0237258
NAV2 neuron navigator 2 0.0234244
MSI2 musashi RNA-binding protein 2 0.0224698
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0224431
DSPP dentin sialophosphoprotein 0.0221786
TTC3 tetratricopeptide repeat domain 3 0.0219927
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0219542
FBXO11 F-box protein 11 0.021786
VEGFC vascular endothelial growth factor C 0.021674
HDLBP high density lipoprotein binding protein 0.0215517
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0215251
SP3 Sp3 transcription factor 0.0214248
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0213865
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A 0.0213414
C1D C1D nuclear receptor corepressor 0.0208375
MBNL2 muscleblind-like splicing regulator 2 0.0204722
GPC6 glypican 6 0.0201076
SUCO SUN domain containing ossification factor 0.0200728
RSF1 remodeling and spacing factor 1 0.0200688
AFDN afadin, adherens junction formation factor 0.0200672
SFTPA2 surfactant protein A2 0.0200369
ANO6 anoctamin 6 0.0200323
LDHA lactate dehydrogenase A 0.0198953
NCKAP1 NCK-associated protein 1 0.0193858
DSCAM Down syndrome cell adhesion molecule 0.019029
MSN moesin 0.0189313
EHBP1 EH domain binding protein 1 0.0186721
MAP4 microtubule-associated protein 4 0.0184796
PRELID2 PRELI domain containing 2 0.0184473
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0181888
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.0180873
MYH9 myosin, heavy chain 9, non-muscle 0.0180812
RAB1A RAB1A, member RAS oncogene family 0.0180211
GDI2 GDP dissociation inhibitor 2 0.0179313
AFF3 AF4/FMR2 family, member 3 0.0178829

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.194087
MT2A metallothionein 2A -0.138573
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.128388
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.112689
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0532574
PTMA prothymosin, alpha -0.0486556
S100A10 S100 calcium binding protein A10 -0.046078
LMNA lamin A/C -0.0456865
NDRG1 N-myc downstream regulated 1 -0.044344
VIM vimentin -0.0432221
MT1X metallothionein 1X -0.0431281
TPT1 tumor protein, translationally-controlled 1 -0.0428505
RPS6 ribosomal protein S6 -0.042651
RPL35A ribosomal protein L35a -0.0409217
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0400898
RPL23 ribosomal protein L23 -0.0388604
CD44 CD44 molecule (Indian blood group) -0.0371211
RPLP2 ribosomal protein, large, P2 -0.036312
RPS19 ribosomal protein S19 -0.0354851
RPL36 ribosomal protein L36 -0.0346155
ACTG1 actin gamma 1 -0.0334586
RPL28 ribosomal protein L28 -0.0330999
RPLP1 ribosomal protein, large, P1 -0.0328521
HLA-B major histocompatibility complex, class I, B -0.0318757
CAVIN1 caveolae associated protein 1 -0.0314267
STC1 stanniocalcin 1 -0.0310493
RPS8 ribosomal protein S8 -0.0308343
RPL37A ribosomal protein L37a -0.0302788
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0297313
RPS24 ribosomal protein S24 -0.0293905
IFITM3 interferon induced transmembrane protein 3 -0.0292993
LOC112694756 uncharaterized LOC112694756 -0.028392
RPL32 ribosomal protein L32 -0.0281041
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0276516
RPS3 ribosomal protein S3 -0.0274515
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0269074
EXT1 exostosin glycosyltransferase 1 -0.0262634
RPL12 ribosomal protein L12 -0.0260897
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0260349
RPL26 ribosomal protein L26 -0.0254993
RPL31 ribosomal protein L31 -0.0243803
SLC38A1 solute carrier family 38, member 1 -0.0240907
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0240417
RPL34 ribosomal protein L34 -0.0234648
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0231972
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0228763
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0227004
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0223681
FTL ferritin, light polypeptide -0.0222121
SEC61G Sec61 gamma subunit -0.0222011
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.022076
RPS15 ribosomal protein S15 -0.021902
FAM162A family with sequence similarity 162, member A -0.0218775
PKM pyruvate kinase, muscle -0.0217064
RPS12 ribosomal protein S12 -0.0215398
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0207161
H3-3B H3.3 histone B -0.0204971
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0203332
MYL12B myosin, light chain 12B, regulatory -0.0202182
EIF5B eukaryotic translation initiation factor 5B -0.0199042
POTEF POTE ankyrin domain family, member F -0.0196666
RPL35 ribosomal protein L35 -0.019599
RPS21 ribosomal protein S21 -0.0195944
IFIH1 interferon induced with helicase C domain 1 -0.0189691
RPL19 ribosomal protein L19 -0.0187219
RPL9 ribosomal protein L9 -0.0186856
RPS14 ribosomal protein S14 -0.0186668
S100A4 S100 calcium binding protein A4 -0.0185328
RPS16 ribosomal protein S16 -0.0182885
S100A6 S100 calcium binding protein A6 -0.0181599
RPL38 ribosomal protein L38 -0.0178995
EEF2 eukaryotic translation elongation factor 2 -0.0167143
RPLP0 ribosomal protein, large, P0 -0.0166748
RPL27A ribosomal protein L27a -0.0163626
RPS23 ribosomal protein S23 -0.0161916
TXNRD1 thioredoxin reductase 1 -0.0160327
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0160116
JPT1 Jupiter microtubule associated homolog 1 -0.0157331
PRDX1 peroxiredoxin 1 -0.0156486
SDC4 syndecan 4 -0.0156232
HMGB1 high mobility group box 1 -0.0155862
ATP5F1E ATP synthase F1 subunit epsilon -0.0155268
SERF2 small EDRK-rich factor 2 -0.0154605
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0153017
RACK1 receptor for activated C kinase 1 -0.0152216
CELF1 CUGBP, Elav-like family member 1 -0.0152144
RPL27 ribosomal protein L27 -0.0150931
IER3 immediate early response 3 -0.0150484
RPS27A ribosomal protein S27a -0.0150188
BSG basigin (Ok blood group) -0.0147917
EGR1 early growth response 1 -0.0147287
CD81 CD81 molecule -0.0147227
NAMPT nicotinamide phosphoribosyltransferase -0.0147171
PFN1 profilin 1 -0.0146978
GABARAPL2 GABA(A) receptor-associated protein-like 2 -0.0146427
RPS29 ribosomal protein S29 -0.0145361
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 -0.0143007
RPL11 ribosomal protein L11 -0.0142292
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0140704
HSPB1 heat shock 27kDa protein 1 -0.0139978