Belinostat_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Belinostat perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Belinostat_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0861347
PSD3 pleckstrin and Sec7 domain containing 3 0.0856688
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0671587
RAI1 retinoic acid induced 1 0.0629889
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0584538
MACF1 microtubule-actin crosslinking factor 1 0.0533827
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0531832
TP63 tumor protein p63 0.0530043
CANX calnexin 0.0524856
TSC22D1 TSC22 domain family, member 1 0.0493019
DLG1 discs, large homolog 1 (Drosophila) 0.0479141
PYGL phosphorylase, glycogen, liver 0.0473189
ZDHHC14 zinc finger, DHHC-type containing 14 0.0463794
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0461058
RAD51B RAD51 paralog B 0.0451446
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0451319
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0448631
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0442095
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0432811
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.041394
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0412784
LOXL2 lysyl oxidase-like 2 0.0410586
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0404483
HDAC9 histone deacetylase 9 0.0402541
SLK STE20-like kinase 0.0383917
PDE10A phosphodiesterase 10A 0.0377703
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0359687
YEATS2 YEATS domain containing 2 0.0359464
EXOC4 exocyst complex component 4 0.034856
EHBP1 EH domain binding protein 1 0.034788
ESYT2 extended synaptotagmin-like protein 2 0.0345966
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0345609
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0341305
DOCK11 dedicator of cytokinesis 11 0.0327137
FTH1 ferritin, heavy polypeptide 1 0.0326994
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0323377
TPM4 tropomyosin 4 0.0316036
NHSL1 NHS-like 1 0.0311131
EFNA5 ephrin-A5 0.0305006
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0297695
PTMA prothymosin, alpha 0.0294128
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.029204
SFTPA2 surfactant protein A2 0.0286915
RIGI RNA sensor RIG-I 0.0281406
RAP2B RAP2B, member of RAS oncogene family 0.0274477
VASP vasodilator-stimulated phosphoprotein 0.0268233
RPS2 ribosomal protein S2 0.0264747
GNPDA1 glucosamine-6-phosphate deaminase 1 0.026351
FBXO11 F-box protein 11 0.026148
UBXN4 UBX domain protein 4 0.0260287
RPL12 ribosomal protein L12 0.0257815
IFITM1 interferon induced transmembrane protein 1 0.0256814
RNF213 ring finger protein 213 0.0254635
ADAM10 ADAM metallopeptidase domain 10 0.0253633
TTC3 tetratricopeptide repeat domain 3 0.0253363
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0251699
BIRC6 baculoviral IAP repeat containing 6 0.0247446
CSMD3 CUB and Sushi multiple domains 3 0.024492
RUNX1 runt-related transcription factor 1 0.0243584
CENPF centromere protein F, 350/400kDa 0.0240061
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0236372
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.023541
LPP LIM domain containing preferred translocation partner in lipoma 0.0233977
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0229179
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0226353
NAV2 neuron navigator 2 0.0223098
RREB1 ras responsive element binding protein 1 0.0220497
TNS3 tensin 3 0.0219118
KLHL24 kelch-like family member 24 0.0219079
LGALS3 lectin, galactoside-binding, soluble, 3 0.0215174
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0214057
WNK1 WNK lysine deficient protein kinase 1 0.021296
NPAS2 neuronal PAS domain protein 2 0.0212362
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0209482
PATJ PATJ crumbs cell polarity complex component 0.020929
MTCL1 microtubule crosslinking factor 1 0.0207063
PIAS2 protein inhibitor of activated STAT, 2 0.0206866
PTK2 protein tyrosine kinase 2 0.0206068
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.020373
EPHA4 EPH receptor A4 0.0201787
CUX1 cut-like homeobox 1 0.0201695
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0201379
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0200958
ZNFX1 zinc finger, NFX1-type containing 1 0.0195497
ERBIN erbb2 interacting protein 0.0192921
SEC24A SEC24 family member A 0.0192856
GOLGA4 golgin A4 0.0190245
SDK1 sidekick cell adhesion molecule 1 0.0187854
KPNB1 karyopherin (importin) beta 1 0.0185731
FNDC3B fibronectin type III domain containing 3B 0.0185652
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0184343
MEF2A myocyte enhancer factor 2A 0.018345
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0183306
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0181218
EPB41 erythrocyte membrane protein band 4.1 0.017986
MYOF myoferlin 0.0178915
EEF1G eukaryotic translation elongation factor 1 gamma 0.0178244
CD109 CD109 molecule 0.0176942
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0176765
PMP22 peripheral myelin protein 22 0.0175905

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.268028
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.223562
TMSB10 thymosin beta 10 -0.188304
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.163977
UBC ubiquitin C -0.143843
EEF2 eukaryotic translation elongation factor 2 -0.116549
MT2A metallothionein 2A -0.10841
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0926345
TM4SF1 transmembrane 4 L six family member 1 -0.0861719
AHNAK AHNAK nucleoprotein -0.0736978
RPS27A ribosomal protein S27a -0.073597
CD44 CD44 molecule (Indian blood group) -0.0726424
JUN jun proto-oncogene -0.0714601
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0662927
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0634725
TXNRD1 thioredoxin reductase 1 -0.0628425
MT1X metallothionein 1X -0.0594946
ACTG1 actin gamma 1 -0.0586787
EZR ezrin -0.0576736
EREG epiregulin -0.0554745
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0544555
LOC112694756 uncharaterized LOC112694756 -0.0544478
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0538109
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0536294
ENO1 enolase 1, (alpha) -0.0517523
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0503371
EMP1 epithelial membrane protein 1 -0.0463248
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0411098
SDC4 syndecan 4 -0.0388919
RPL23 ribosomal protein L23 -0.0373216
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0353815
POTEF POTE ankyrin domain family, member F -0.0353335
KDM3A lysine (K)-specific demethylase 3A -0.0340024
S100A6 S100 calcium binding protein A6 -0.0329989
RPL4 ribosomal protein L4 -0.0324937
RTN4 reticulon 4 -0.0320541
PDIA4 protein disulfide isomerase family A, member 4 -0.0306561
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0306395
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0304447
RBM25 RNA binding motif protein 25 -0.0295057
SRRM2 serine/arginine repetitive matrix 2 -0.0294092
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0290436
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0287295
RBM39 RNA binding motif protein 39 -0.0284249
MT1E metallothionein 1E -0.0283264
RPS12 ribosomal protein S12 -0.0279829
SFPQ splicing factor proline/glutamine-rich -0.0274722
VMP1 vacuole membrane protein 1 -0.0272136
ZFAND3 zinc finger, AN1-type domain 3 -0.0254759
NAP1L1 nucleosome assembly protein 1-like 1 -0.0254114
RPS24 ribosomal protein S24 -0.0253444
SPAG9 sperm associated antigen 9 -0.0250638
PKM pyruvate kinase, muscle -0.0248345
RPS4X ribosomal protein S4, X-linked -0.0243255
LDHA lactate dehydrogenase A -0.024275
MATR3 matrin 3 -0.024214
TMEM41B transmembrane protein 41B -0.0230517
TRIO trio Rho guanine nucleotide exchange factor -0.0228399
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae) -0.0227624
TPT1 tumor protein, translationally-controlled 1 -0.0225463
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0225406
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0223646
CFLAR CASP8 and FADD-like apoptosis regulator -0.0223126
TNPO1 transportin 1 -0.0222782
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0221206
PUM1 pumilio RNA-binding family member 1 -0.0218405
TSC22D2 TSC22 domain family, member 2 -0.0217182
IPO7 importin 7 -0.0216107
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0212859
SEPTIN2 septin 2 -0.0209061
PRRC2C proline-rich coiled-coil 2C -0.020349
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0200663
CELF1 CUGBP, Elav-like family member 1 -0.0199865
RHOA ras homolog family member A -0.0197897
KHSRP KH-type splicing regulatory protein -0.0197261
S100A10 S100 calcium binding protein A10 -0.0196615
BLTP2 bridge-like lipid transfer protein family member 2 -0.0195742
RPL7A ribosomal protein L7a -0.0192058
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0192015
EXT1 exostosin glycosyltransferase 1 -0.0191839
OSBPL8 oxysterol binding protein-like 8 -0.0191416
SENP5 SUMO1/sentrin specific peptidase 5 -0.0190364
USP9X ubiquitin specific peptidase 9, X-linked -0.018794
HMGB2 high mobility group box 2 -0.018596
PGK1 phosphoglycerate kinase 1 -0.0185936
MAPK8 mitogen-activated protein kinase 8 -0.0185052
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.0184694
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0182639
PDIA3 protein disulfide isomerase family A, member 3 -0.0182136
TOP1 topoisomerase (DNA) I -0.0182015
DENND5A DENN/MADD domain containing 5A -0.0181675
RHEB Ras homolog enriched in brain -0.0179764
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0178552
SLC38A2 solute carrier family 38, member 2 -0.0178369
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0176271
OGA O-GlcNAcase -0.0176233
SPRY4 sprouty homolog 4 (Drosophila) -0.0176014
PUM2 pumilio RNA-binding family member 2 -0.0175556
KLF6 Kruppel-like factor 6 -0.0174106
CKAP5 cytoskeleton associated protein 5 -0.0171299