Belinostat_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Belinostat perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Belinostat_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor 0.196348
INTS6 integrator complex subunit 6 0.085564
CANX calnexin 0.0775842
SOD2 superoxide dismutase 2, mitochondrial 0.0720884
HDLBP high density lipoprotein binding protein 0.0684861
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0655271
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0647824
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0587073
LMO7 LIM domain 7 0.0579585
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0561896
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0558344
SEC31A SEC31 homolog A (S. cerevisiae) 0.0528633
AGO2 argonaute RISC catalytic component 2 0.0478914
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0455664
DSCAM Down syndrome cell adhesion molecule 0.0447945
SAMD4A sterile alpha motif domain containing 4A 0.042379
NGLY1 N-glycanase 1 0.041376
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0411081
FTH1 ferritin, heavy polypeptide 1 0.0410192
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0397861
BACE2 beta-site APP-cleaving enzyme 2 0.0387569
ANXA2 annexin A2 0.0370356
CAMTA1 calmodulin binding transcription activator 1 0.0366287
AHNAK AHNAK nucleoprotein 0.0347157
OGA O-GlcNAcase 0.0317455
NSUN6 NOP2/Sun domain family, member 6 0.0313085
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0309667
CES1 carboxylesterase 1 0.0306569
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0306087
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0304529
PCBP2 poly(rC) binding protein 2 0.0304204
MCL1 myeloid cell leukemia 1 0.0302467
BZW1 basic leucine zipper and W2 domains 1 0.0301505
PATJ PATJ crumbs cell polarity complex component 0.0297395
PLEC plectin 0.0296706
GOLGB1 golgin B1 0.02884
WASF2 WAS protein family, member 2 0.0277361
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0277112
ABLIM1 actin binding LIM protein 1 0.0275451
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0271448
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0262137
NDE1 nudE neurodevelopment protein 1 0.026107
ZBTB20 zinc finger and BTB domain containing 20 0.0254506
SPDYA speedy/RINGO cell cycle regulator family member A 0.0249372
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0246501
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.024501
HOMER1 homer scaffolding protein 1 0.0244562
GRB10 growth factor receptor-bound protein 10 0.0242208
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.024018
PYGL phosphorylase, glycogen, liver 0.0233984
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0232906
IRF1 interferon regulatory factor 1 0.0229433
TMCO3 transmembrane and coiled-coil domains 3 0.0227917
TMED2 transmembrane emp24 domain trafficking protein 2 0.0226368
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0225347
TRAPPC9 trafficking protein particle complex 9 0.0224235
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.022405
GOLGA3 golgin A3 0.0220816
ATXN1 ataxin 1 0.0220696
ARRDC3 arrestin domain containing 3 0.021975
HBP1 HMG-box transcription factor 1 0.0217419
CSNK1A1 casein kinase 1, alpha 1 0.0217246
SQSTM1 sequestosome 1 0.0214722
KLHL24 kelch-like family member 24 0.0213816
MINDY2 MINDY lysine 48 deubiquitinase 2 0.02129
EEF1G eukaryotic translation elongation factor 1 gamma 0.0209881
CCNG2 cyclin G2 0.0209124
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0208062
AEBP2 AE binding protein 2 0.0206897
RAD21 RAD21 homolog (S. pombe) 0.0203188
EYA2 EYA transcriptional coactivator and phosphatase 2 0.0199145
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0195028
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0192806
DSPP dentin sialophosphoprotein 0.0191648
RLIM ring finger protein, LIM domain interacting 0.0191172
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like 0.0189925
ARCN1 archain 1 0.0185408
ZBTB1 zinc finger and BTB domain containing 1 0.0184511
BIRC6 baculoviral IAP repeat containing 6 0.0184498
TMEM184B transmembrane protein 184B 0.0183416
HOOK2 hook microtubule-tethering protein 2 0.0183347
MRPS6 mitochondrial ribosomal protein S6 0.0182664
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0179466
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0172855
ANKLE2 ankyrin repeat and LEM domain containing 2 0.0172818
APOLD1 apolipoprotein L domain containing 1 0.0170789
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0168214
GUK1 guanylate kinase 1 0.0166924
KDM5B lysine (K)-specific demethylase 5B 0.0166788
RAP2B RAP2B, member of RAS oncogene family 0.0165818
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0162899
CTBP2 C-terminal binding protein 2 0.0161869
GPATCH2L G patch domain containing 2-like 0.0160862
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0160813
LYST lysosomal trafficking regulator 0.0158021
FBXO11 F-box protein 11 0.0157052
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0154867
EIF4A2 eukaryotic translation initiation factor 4A2 0.0152069
GOLGA2 golgin A2 0.0151261
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0151192

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.283044
TMSB10 thymosin beta 10 -0.154008
GRAMD1B GRAM domain containing 1B -0.0946058
MT2A metallothionein 2A -0.0877746
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0771898
NAMPT nicotinamide phosphoribosyltransferase -0.077035
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0766396
CST3 cystatin C -0.0737839
NDRG1 N-myc downstream regulated 1 -0.0722798
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0714346
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) -0.0692009
SLC38A1 solute carrier family 38, member 1 -0.0616692
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0583096
LRP1B low density lipoprotein receptor-related protein 1B -0.0557354
AKR1C1 aldo-keto reductase family 1, member C1 -0.0553509
PKM pyruvate kinase, muscle -0.0510245
SEC61G Sec61 gamma subunit -0.0504963
CAV1 caveolin 1, caveolae protein, 22kDa -0.0499939
FTL ferritin, light polypeptide -0.0485078
OSMR oncostatin M receptor -0.0477984
RPL37A ribosomal protein L37a -0.047747
PDE4D phosphodiesterase 4D, cAMP-specific -0.0470488
RPL35A ribosomal protein L35a -0.0460605
RPS6 ribosomal protein S6 -0.0438462
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0434147
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0424078
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0423891
PRRC2C proline-rich coiled-coil 2C -0.0422059
ACTG1 actin gamma 1 -0.0417763
AREG amphiregulin -0.0391019
RAB10 RAB10, member RAS oncogene family -0.0382601
RPS3 ribosomal protein S3 -0.0380676
ANKRD12 ankyrin repeat domain 12 -0.0364522
RPLP1 ribosomal protein, large, P1 -0.0363838
LAMA4 laminin, alpha 4 -0.0353966
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0350242
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0348825
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0348534
CCND1 cyclin D1 -0.0345358
KRT7 keratin 7, type II -0.0345272
RPS12 ribosomal protein S12 -0.0342936
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0337594
GPHN gephyrin -0.0333691
JMJD1C jumonji domain containing 1C -0.0330374
DTNA dystrobrevin, alpha -0.0330066
RPS25 ribosomal protein S25 -0.0328537
IFI6 interferon, alpha-inducible protein 6 -0.0324971
MYOF myoferlin -0.0316919
THSD4 thrombospondin, type I, domain containing 4 -0.0315833
B2M beta-2-microglobulin -0.0314071
S100A10 S100 calcium binding protein A10 -0.0310073
KTN1 kinectin 1 (kinesin receptor) -0.030894
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 -0.0303579
LAMC2 laminin, gamma 2 -0.0302727
FAF1 Fas (TNFRSF6) associated factor 1 -0.0300838
ANKRD11 ankyrin repeat domain 11 -0.0300741
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0299119
S100A9 S100 calcium binding protein A9 -0.0293201
RPS24 ribosomal protein S24 -0.0292886
PDIA3 protein disulfide isomerase family A, member 3 -0.0292039
PRDX1 peroxiredoxin 1 -0.0291236
MGST1 microsomal glutathione S-transferase 1 -0.0288689
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0282201
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.028101
FNDC3B fibronectin type III domain containing 3B -0.0276162
RBM39 RNA binding motif protein 39 -0.0273369
RPS19 ribosomal protein S19 -0.0271318
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0267089
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.026303
LOC112694756 uncharaterized LOC112694756 -0.0259352
KMT2E lysine (K)-specific methyltransferase 2E -0.0259024
TNPO1 transportin 1 -0.025866
ARHGAP32 Rho GTPase activating protein 32 -0.0256597
CDCP1 CUB domain containing protein 1 -0.025541
ALCAM activated leukocyte cell adhesion molecule -0.0252371
S100A11 S100 calcium binding protein A11 -0.0251893
SRRM2 serine/arginine repetitive matrix 2 -0.0248412
RPLP2 ribosomal protein, large, P2 -0.0246005
PUM2 pumilio RNA-binding family member 2 -0.024592
ADNP activity-dependent neuroprotector homeobox -0.0242688
EGR1 early growth response 1 -0.0241354
SMYD3 SET and MYND domain containing 3 -0.0240681
GCLC glutamate-cysteine ligase, catalytic subunit -0.0238504
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0236929
BABAM2 BRISC and BRCA1 A complex member 2 -0.0235959
POTEF POTE ankyrin domain family, member F -0.023512
SCEL sciellin -0.023191
ZNF292 zinc finger protein 292 -0.0229874
RPL31 ribosomal protein L31 -0.022772
EFNA5 ephrin-A5 -0.0227003
TOP1 topoisomerase (DNA) I -0.0226659
RAB27B RAB27B, member RAS oncogene family -0.0224847
ADAM9 ADAM metallopeptidase domain 9 -0.0223614
EIF5B eukaryotic translation initiation factor 5B -0.0221443
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0221058
IER3 immediate early response 3 -0.02191
MED13L mediator complex subunit 13-like -0.0216917
C15ORF48 chromosome 15 open reading frame 48 -0.0215869
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0213169
MATR3 matrin 3 -0.0212819