Benproperine (phosphate)_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Benproperine (phosphate) perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Benproperine (phosphate)_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DLC1 DLC1 Rho GTPase activating protein 0.116294
ZNF438 zinc finger protein 438 0.0983657
LPP LIM domain containing preferred translocation partner in lipoma 0.0692991
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0644724
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.061973
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0599067
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0570799
PGK1 phosphoglycerate kinase 1 0.0524028
RPL35A ribosomal protein L35a 0.0518816
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0517771
BNC2 basonuclin 2 0.0509187
RPLP0 ribosomal protein, large, P0 0.0499867
NAP1L1 nucleosome assembly protein 1-like 1 0.0477377
FRMD4A FERM domain containing 4A 0.0436742
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0423383
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0408975
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0392882
SSR3 signal sequence receptor, gamma (translocon-associated protein gamma) 0.0392023
PBX3 pre-B-cell leukemia homeobox 3 0.0383154
STC1 stanniocalcin 1 0.0380221
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) 0.0380079
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.0378835
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0374081
ELL2 elongation factor, RNA polymerase II, 2 0.0370413
RAD51B RAD51 paralog B 0.0357203
PCBP2 poly(rC) binding protein 2 0.0353381
SLC38A2 solute carrier family 38, member 2 0.0347595
CALD1 caldesmon 1 0.0320953
HMGA1 high mobility group AT-hook 1 0.0316037
TMSB10 thymosin beta 10 0.0313619
MSI2 musashi RNA-binding protein 2 0.0304227
PIAS2 protein inhibitor of activated STAT, 2 0.0290974
ENO1 enolase 1, (alpha) 0.0287734
C2CD2 C2 calcium-dependent domain containing 2 0.0285893
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0283875
TRIO trio Rho guanine nucleotide exchange factor 0.028133
FMNL2 formin-like 2 0.0279757
TBC1D5 TBC1 domain family, member 5 0.0278661
ANTXR2 anthrax toxin receptor 2 0.0278311
KPNB1 karyopherin (importin) beta 1 0.0276927
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0275705
HDAC9 histone deacetylase 9 0.0274613
NAV3 neuron navigator 3 0.02737
BIRC6 baculoviral IAP repeat containing 6 0.0266549
POU2F1 POU class 2 homeobox 1 0.026122
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0255673
PUM1 pumilio RNA-binding family member 1 0.0255361
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0253791
LDHA lactate dehydrogenase A 0.0253586
CBX3 chromobox homolog 3 0.0252248
ATP13A3 ATPase type 13A3 0.0250739
WAC WW domain containing adaptor with coiled-coil 0.0246515
S100A2 S100 calcium binding protein A2 0.0244904
SRPK2 SRSF protein kinase 2 0.0243641
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0241464
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0238807
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0236174
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0235791
ZNF292 zinc finger protein 292 0.0235684
BZW1 basic leucine zipper and W2 domains 1 0.02356
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0230096
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.0226696
ZBTB20 zinc finger and BTB domain containing 20 0.0224072
EIF3E eukaryotic translation initiation factor 3, subunit E 0.021984
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0219628
FLNB filamin B, beta 0.0219611
PA2G4 proliferation-associated 2G4, 38kDa 0.0219383
SAMD12 sterile alpha motif domain containing 12 0.0217441
TPM4 tropomyosin 4 0.0217099
RPS24 ribosomal protein S24 0.0216684
NAMPT nicotinamide phosphoribosyltransferase 0.0216331
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0213262
RAD23B RAD23 homolog B (S. cerevisiae) 0.0212621
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0209641
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0209211
RAB3IP RAB3A interacting protein 0.0208003
SSB Sjogren syndrome antigen B (autoantigen La) 0.0207766
XPO1 exportin 1 0.0207601
OSBPL8 oxysterol binding protein-like 8 0.020735
RAD21 RAD21 homolog (S. pombe) 0.0204674
PNISR PNN-interacting serine/arginine-rich protein 0.0201391
HMGA2 high mobility group AT-hook 2 0.0198809
TM4SF19 transmembrane 4 L six family member 19 0.0195859
LCORL ligand dependent nuclear receptor corepressor-like 0.0195653
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0195606
CAST calpastatin 0.0192706
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.01919
VDAC1 voltage-dependent anion channel 1 0.0191285
CEP44 centrosomal protein 44kDa 0.0190818
TENM3 teneurin transmembrane protein 3 0.0189102
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0188365
RPS12 ribosomal protein S12 0.0187966
HMGB2 high mobility group box 2 0.0187928
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0186614
CD2AP CD2-associated protein 0.0184392
RPL30 ribosomal protein L30 0.0184099
DIAPH3 diaphanous-related formin 3 0.0183266
FXR1 fragile X mental retardation, autosomal homolog 1 0.0182749
EEF1G eukaryotic translation elongation factor 1 gamma 0.0182189
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0179851

decreased expression

Symbol Name Standardized Value
ACTG1 actin gamma 1 -0.166234
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0891148
JMJD1C jumonji domain containing 1C -0.0828246
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0825808
EXT1 exostosin glycosyltransferase 1 -0.0761688
RPS2 ribosomal protein S2 -0.0598676
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.058989
USP34 ubiquitin specific peptidase 34 -0.0578042
MCTP1 multiple C2 domains, transmembrane 1 -0.0543051
CAPRIN2 caprin family member 2 -0.0540821
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0499943
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0473958
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0473096
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0462902
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0452679
RPL3 ribosomal protein L3 -0.0425918
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0423889
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0403026
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0399686
TXNRD1 thioredoxin reductase 1 -0.0390224
TMF1 TATA element modulatory factor 1 -0.0389047
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0388294
RPL7 ribosomal protein L7 -0.0375689
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0359789
CAPN2 calpain 2, (m/II) large subunit -0.0351372
RBM39 RNA binding motif protein 39 -0.034993
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0347498
CREB5 cAMP responsive element binding protein 5 -0.0343418
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0335769
SGMS2 sphingomyelin synthase 2 -0.0334432
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase -0.0326526
PTPN1 protein tyrosine phosphatase, non-receptor type 1 -0.0320863
STK4 serine/threonine kinase 4 -0.0319995
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0318946
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0317306
AKAP12 A kinase (PRKA) anchor protein 12 -0.0311672
UPP1 uridine phosphorylase 1 -0.0309752
CTTNBP2NL CTTNBP2 N-terminal like -0.0307941
TRIP12 thyroid hormone receptor interactor 12 -0.0305952
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.0305833
BRD2 bromodomain containing 2 -0.0302094
BIRC2 baculoviral IAP repeat containing 2 -0.0301392
RECQL RecQ helicase-like -0.0300789
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0299155
TASOR2 transcription activation suppressor family member 2 -0.0298462
WASL Wiskott-Aldrich syndrome-like -0.0288528
TMEM156 transmembrane protein 156 -0.0286309
SAMD4A sterile alpha motif domain containing 4A -0.0284539
TPD52 tumor protein D52 -0.0282574
RPL7A ribosomal protein L7a -0.0274487
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0273252
CALU calumenin -0.0260394
RPS18 ribosomal protein S18 -0.0259008
STRN striatin, calmodulin binding protein -0.0255799
PRELID2 PRELI domain containing 2 -0.025482
HSPA8 heat shock 70kDa protein 8 -0.0254405
CORO1C coronin, actin binding protein, 1C -0.0252758
DOCK5 dedicator of cytokinesis 5 -0.0251556
DSG2 desmoglein 2 -0.0250689
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.024985
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0249445
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.0247819
MCL1 myeloid cell leukemia 1 -0.0246392
NKTR natural killer cell triggering receptor -0.0245751
SPAG9 sperm associated antigen 9 -0.0238342
ARFGEF3 ARFGEF family member 3 -0.0237009
UBC ubiquitin C -0.0235908
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 -0.0235303
ATM ATM serine/threonine kinase -0.0234764
PDE4D phosphodiesterase 4D, cAMP-specific -0.0232596
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0232001
CLTC clathrin, heavy chain (Hc) -0.0231669
MYO9B myosin IXB -0.0231299
HDLBP high density lipoprotein binding protein -0.0231189
CHIC2 cysteine-rich hydrophobic domain 2 -0.0228425
CSNK1A1 casein kinase 1, alpha 1 -0.0227444
WDFY2 WD repeat and FYVE domain containing 2 -0.0225507
MYO9A myosin IXA -0.0223573
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0222931
GLIPR1 GLI pathogenesis-related 1 -0.0222813
ZEB1 zinc finger E-box binding homeobox 1 -0.0220849
MYH9 myosin, heavy chain 9, non-muscle -0.0219864
SON SON DNA binding protein -0.0219175
RASA2 RAS p21 protein activator 2 -0.0218672
BRD4 bromodomain containing 4 -0.0218379
ADAR adenosine deaminase, RNA-specific -0.0218265
TUT7 terminal uridylyl transferase 7 -0.0218162
ZNF706 zinc finger protein 706 -0.0216499
TOMM34 translocase of outer mitochondrial membrane 34 -0.0211153
H1-4 H1.4 linker histone, cluster member -0.0210344
RNF216 ring finger protein 216 -0.0209996
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0209551
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic) -0.0208973
TAC4 tachykinin 4 (hemokinin) -0.0207998
SETX senataxin -0.0207249
STXBP1 syntaxin binding protein 1 -0.0206464
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0206419
EXOC6B exocyst complex component 6B -0.0205931
BPNT2 3'(2'), 5'-bisphosphate nucleotidase 2 -0.0204878
WDR26 WD repeat domain 26 -0.0203896