Bentamapimod_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bentamapimod perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bentamapimod_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0997534
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0977741
TRIO trio Rho guanine nucleotide exchange factor 0.0656466
POTEF POTE ankyrin domain family, member F 0.0612213
RHOBTB3 Rho-related BTB domain containing 3 0.0525269
CENPF centromere protein F, 350/400kDa 0.0507399
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.048355
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0479158
HDAC9 histone deacetylase 9 0.0468295
SQSTM1 sequestosome 1 0.0429475
RPL23 ribosomal protein L23 0.0428578
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0411087
RPL12 ribosomal protein L12 0.0398669
LDHA lactate dehydrogenase A 0.0370345
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0340925
RPL37A ribosomal protein L37a 0.0328804
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0321992
RACK1 receptor for activated C kinase 1 0.0321875
RPS3 ribosomal protein S3 0.0321828
EIF1 eukaryotic translation initiation factor 1 0.0318537
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0308504
LOC102724023 ES1 protein homolog, mitochondrial 0.0298176
RPLP2 ribosomal protein, large, P2 0.0293105
FOSL1 FOS-like antigen 1 0.0279977
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0276659
RPS19 ribosomal protein S19 0.0275947
RPLP1 ribosomal protein, large, P1 0.0275156
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0270295
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0261066
BHLHE40 basic helix-loop-helix family, member e40 0.02605
EZR ezrin 0.0258839
EEF2 eukaryotic translation elongation factor 2 0.0257688
SON SON DNA binding protein 0.0257077
RPL26 ribosomal protein L26 0.0256821
RPS6 ribosomal protein S6 0.0251448
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0244832
RPS8 ribosomal protein S8 0.0243081
DSPP dentin sialophosphoprotein 0.0236291
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0236107
ERBIN erbb2 interacting protein 0.023524
KLF10 Kruppel-like factor 10 0.0235008
ALCAM activated leukocyte cell adhesion molecule 0.0233448
TMSB4X thymosin beta 4, X-linked 0.0230443
RPL19 ribosomal protein L19 0.0229291
TLE4 transducin-like enhancer of split 4 0.0228764
RPL28 ribosomal protein L28 0.0225008
ENO1 enolase 1, (alpha) 0.0224162
RPS17 ribosomal protein S17 0.0222885
KLF6 Kruppel-like factor 6 0.0222786
RPL36 ribosomal protein L36 0.0217755
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0213933
RPS12 ribosomal protein S12 0.0213425
RPL35 ribosomal protein L35 0.0211729
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0206045
RND3 Rho family GTPase 3 0.0205176
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0203297
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0202615
B2M beta-2-microglobulin 0.0197279
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0192806
SEPTIN7 septin 7 0.0188335
IFITM3 interferon induced transmembrane protein 3 0.0183915
MSN moesin 0.0183803
LGALS1 lectin, galactoside-binding, soluble, 1 0.0182768
RPL31 ribosomal protein L31 0.0182452
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0181189
DDIT4 DNA-damage-inducible transcript 4 0.018031
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0179239
SERTAD2 SERTA domain containing 2 0.0177504
S100A11 S100 calcium binding protein A11 0.0174698
OR51B5 olfactory receptor, family 51, subfamily B, member 5 0.0174306
FLNA filamin A, alpha 0.0173804
RPS27 ribosomal protein S27 0.0173617
RPL32 ribosomal protein L32 0.0169127
IPO7 importin 7 0.0167764
SEC61G Sec61 gamma subunit 0.0166434
RPS16 ribosomal protein S16 0.0165642
ANKRD11 ankyrin repeat domain 11 0.0165311
YBX1 Y box binding protein 1 0.0164259
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.0164214
PRRC2C proline-rich coiled-coil 2C 0.0163887
RPS14 ribosomal protein S14 0.015966
RPS23 ribosomal protein S23 0.0158659
RPL27 ribosomal protein L27 0.0156276
PPARD peroxisome proliferator-activated receptor delta 0.0152517
RPL9 ribosomal protein L9 0.0149905
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0149772
JPT1 Jupiter microtubule associated homolog 1 0.0147916
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0147801
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0147384
NAP1L1 nucleosome assembly protein 1-like 1 0.0146592
NUAK2 NUAK family, SNF1-like kinase, 2 0.0146055
FTL ferritin, light polypeptide 0.014588
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.01445
RPS27A ribosomal protein S27a 0.0143777
LIMCH1 LIM and calponin homology domains 1 0.0143183
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0143004
ACTN1 actinin, alpha 1 0.0141098
SMAD3 SMAD family member 3 0.0140559
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0140444
RPL11 ribosomal protein L11 0.0139708

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.251858
PLAT plasminogen activator, tissue -0.184441
VIM vimentin -0.136219
LOX lysyl oxidase -0.125449
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.121805
COL8A1 collagen, type VIII, alpha 1 -0.110669
FBN1 fibrillin 1 -0.106384
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.104558
AKAP12 A kinase (PRKA) anchor protein 12 -0.10224
COL1A2 collagen, type I, alpha 2 -0.0965605
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0913196
LOXL2 lysyl oxidase-like 2 -0.0870496
ZBTB20 zinc finger and BTB domain containing 20 -0.0731938
PSD3 pleckstrin and Sec7 domain containing 3 -0.0618445
COL5A2 collagen, type V, alpha 2 -0.0598921
PODXL podocalyxin-like -0.0584609
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.058096
NAV1 neuron navigator 1 -0.0564303
COL5A1 collagen, type V, alpha 1 -0.0546077
SOD2 superoxide dismutase 2, mitochondrial -0.0532618
ABI3BP ABI family, member 3 (NESH) binding protein -0.0516968
PRSS23 protease, serine, 23 -0.0514069
AUTS2 autism susceptibility candidate 2 -0.0511768
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0505687
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0505178
HLA-B major histocompatibility complex, class I, B -0.0500889
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0491722
FRMD4A FERM domain containing 4A -0.0477829
FN1 fibronectin 1 -0.0472998
PDE4D phosphodiesterase 4D, cAMP-specific -0.0469886
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0461017
SUCNR1 succinate receptor 1 -0.0448328
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0444986
GLIS3 GLIS family zinc finger 3 -0.0444146
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0439625
CD99 CD99 molecule -0.0434856
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0428029
MRPS6 mitochondrial ribosomal protein S6 -0.0421192
UBC ubiquitin C -0.0419714
MAP4 microtubule-associated protein 4 -0.0409743
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0392867
DST dystonin -0.0392486
SLC39A11 solute carrier family 39, member 11 -0.0383343
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0360407
JAZF1 JAZF zinc finger 1 -0.035414
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0353397
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0351268
STC1 stanniocalcin 1 -0.0347583
CANX calnexin -0.0331406
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0330119
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0327365
MYADM myeloid-associated differentiation marker -0.0327352
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0320665
MX2 MX dynamin-like GTPase 2 -0.0319791
OGA O-GlcNAcase -0.0318981
TMSB10 thymosin beta 10 -0.0317764
FBXL7 F-box and leucine-rich repeat protein 7 -0.0310759
ARL15 ADP-ribosylation factor-like 15 -0.0307527
GPC6 glypican 6 -0.0306594
DKK3 dickkopf WNT signaling pathway inhibitor 3 -0.0302277
DPYSL3 dihydropyrimidinase-like 3 -0.0301584
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0300744
CUX1 cut-like homeobox 1 -0.0290886
SPAG9 sperm associated antigen 9 -0.0290156
HIP1 huntingtin interacting protein 1 -0.0286768
ASPH aspartate beta-hydroxylase -0.0283096
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0271456
RTN4 reticulon 4 -0.0270596
ARL4C ADP-ribosylation factor-like 4C -0.0267007
CEP170 centrosomal protein 170kDa -0.0265229
PDIA3 protein disulfide isomerase family A, member 3 -0.0263022
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.026277
WARS1 tryptophanyl-tRNA synthetase 1 -0.0262652
COL6A1 collagen, type VI, alpha 1 -0.0260491
FNDC3B fibronectin type III domain containing 3B -0.02582
SLC38A1 solute carrier family 38, member 1 -0.0257432
WWTR1 WW domain containing transcription regulator 1 -0.0255886
PGK1 phosphoglycerate kinase 1 -0.0253909
SRPK2 SRSF protein kinase 2 -0.0253163
CTSB cathepsin B -0.0252453
NCOR2 nuclear receptor corepressor 2 -0.0251269
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0249575
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0240356
KIFAP3 kinesin-associated protein 3 -0.0238704
MT2A metallothionein 2A -0.0237487
MEIS2 Meis homeobox 2 -0.0236551
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0235173
PXDN peroxidasin -0.0231045
MT1X metallothionein 1X -0.0229636
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0229445
SP3 Sp3 transcription factor -0.0229006
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0227131
PARD3 par-3 family cell polarity regulator -0.0225943
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0224287
ANKRD10 ankyrin repeat domain 10 -0.0222462
MMP12 matrix metallopeptidase 12 -0.0221595
CDH13 cadherin 13 -0.021961
AHNAK AHNAK nucleoprotein -0.02168
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0212187
NRP1 neuropilin 1 -0.0210432