Bentamapimod_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bentamapimod perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bentamapimod_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CD44 CD44 molecule (Indian blood group) 0.17466
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.129828
CTBP2 C-terminal binding protein 2 0.127515
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.111781
TTC3 tetratricopeptide repeat domain 3 0.109603
RAD51B RAD51 paralog B 0.108509
GOLGA4 golgin A4 0.100698
MTSS1 metastasis suppressor 1 0.0973367
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0964542
ZFAND3 zinc finger, AN1-type domain 3 0.0945191
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0938295
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.091773
WNK1 WNK lysine deficient protein kinase 1 0.0897019
RPLP2 ribosomal protein, large, P2 0.0850592
TRIO trio Rho guanine nucleotide exchange factor 0.0836305
FAT1 FAT atypical cadherin 1 0.0784274
PTPRK protein tyrosine phosphatase, receptor type, K 0.0773157
KLF5 Kruppel-like factor 5 (intestinal) 0.0769394
CDCP1 CUB domain containing protein 1 0.0753793
ZNF638 zinc finger protein 638 0.0740498
GNAQ guanine nucleotide binding protein (G protein), q polypeptide 0.0720797
TES testin LIM domain protein 0.0716552
RPL13A ribosomal protein L13a 0.0706004
MAP3K2 mitogen-activated protein kinase kinase kinase 2 0.067257
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0671596
MYOF myoferlin 0.0666682
GCLC glutamate-cysteine ligase, catalytic subunit 0.0659913
ARHGAP5 Rho GTPase activating protein 5 0.0656858
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0649143
CREBBP CREB binding protein 0.0648926
RASAL2 RAS protein activator like 2 0.0647926
TNRC6B trinucleotide repeat containing 6B 0.0641547
IGF1R insulin-like growth factor 1 receptor 0.0634899
SVIL supervillin 0.0607586
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0599563
TAS2R14 taste receptor, type 2, member 14 0.0596688
GLIS3 GLIS family zinc finger 3 0.0582969
ANKRD17 ankyrin repeat domain 17 0.0581093
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.057919
GLS2 glutaminase 2 (liver, mitochondrial) 0.0575781
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0575418
PHF3 PHD finger protein 3 0.0567075
ZNF292 zinc finger protein 292 0.0564829
TNRC6A trinucleotide repeat containing 6A 0.0555384
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0545887
SND1 staphylococcal nuclease and tudor domain containing 1 0.0536044
MED13 mediator complex subunit 13 0.0534915
PARD3 par-3 family cell polarity regulator 0.0532359
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0526882
DEK DEK proto-oncogene 0.051828
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.051828
RPL31 ribosomal protein L31 0.0512564
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.051233
HDLBP high density lipoprotein binding protein 0.0508327
CCNY cyclin Y 0.050248
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) 0.0491802
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.04899
ANKHD1 ankyrin repeat and KH domain containing 1 0.0488599
PTMA prothymosin, alpha 0.0477032
CAPN2 calpain 2, (m/II) large subunit 0.0467083
PATJ PATJ crumbs cell polarity complex component 0.0464536
EPCAM epithelial cell adhesion molecule 0.0463844
OSBPL3 oxysterol binding protein-like 3 0.0447579
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0445607
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0438763
PLAUR plasminogen activator, urokinase receptor 0.0432625
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0431471
TCF12 transcription factor 12 0.0425606
HMGA1 high mobility group AT-hook 1 0.0424394
HMGA2 high mobility group AT-hook 2 0.0422961
ANKRD12 ankyrin repeat domain 12 0.0418691
ATXN1 ataxin 1 0.0406801
SETD5 SET domain containing 5 0.0399811
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.0398223
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0394712
LDHA lactate dehydrogenase A 0.0393358
TPT1 tumor protein, translationally-controlled 1 0.0391783
RAB18 RAB18, member RAS oncogene family 0.0389399
HP1BP3 heterochromatin protein 1, binding protein 3 0.0378584
NEMF nuclear export mediator factor 0.0373409
DLG1 discs, large homolog 1 (Drosophila) 0.0366953
MAP4 microtubule-associated protein 4 0.0362997
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0341352
FLNB filamin B, beta 0.0341146
AKAP9 A kinase (PRKA) anchor protein 9 0.0318872
ZBTB20 zinc finger and BTB domain containing 20 0.0307241
RACK1 receptor for activated C kinase 1 0.0305569
USP34 ubiquitin specific peptidase 34 0.0298827
SLC38A2 solute carrier family 38, member 2 0.0296439
WWC2 WW and C2 domain containing 2 0.0294323
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0292756
SOS1 son of sevenless homolog 1 (Drosophila) 0.0287977
PDIA6 protein disulfide isomerase family A, member 6 0.028685
METTL15 methyltransferase like 15 0.0277697
BPTF bromodomain PHD finger transcription factor 0.0276724
EGFR epidermal growth factor receptor 0.0273782
CDK13 cyclin-dependent kinase 13 0.0263376
RPS23 ribosomal protein S23 0.0255085
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0254558
IGF2 insulin-like growth factor 2 0.0244814

decreased expression

Symbol Name Standardized Value
LAMA4 laminin, alpha 4 -0.141255
ELL2 elongation factor, RNA polymerase II, 2 -0.139636
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.134782
PDE10A phosphodiesterase 10A -0.110424
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.10115
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.101043
FAM13A family with sequence similarity 13, member A -0.0996
RAB7A RAB7A, member RAS oncogene family -0.0982173
AFF4 AF4/FMR2 family, member 4 -0.0970187
PDE4D phosphodiesterase 4D, cAMP-specific -0.0953588
DSCAM Down syndrome cell adhesion molecule -0.0949815
USP3 ubiquitin specific peptidase 3 -0.0945387
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0942181
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.093254
RPL15 ribosomal protein L15 -0.092971
NKD1 naked cuticle homolog 1 (Drosophila) -0.0891325
TXNRD1 thioredoxin reductase 1 -0.0889239
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0871652
BHLHE40 basic helix-loop-helix family, member e40 -0.0860723
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.084036
EIF1 eukaryotic translation initiation factor 1 -0.0839596
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.081135
MAML3 mastermind-like 3 (Drosophila) -0.0802017
SEC31A SEC31 homolog A (S. cerevisiae) -0.0793408
NAMPT nicotinamide phosphoribosyltransferase -0.0779897
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0764254
JMJD1C jumonji domain containing 1C -0.0754082
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0749055
SBF2 SET binding factor 2 -0.0742423
NALF1 NALCN channel auxiliary factor 1 -0.0737922
FN1 fibronectin 1 -0.0734521
PDE8A phosphodiesterase 8A -0.0728501
CALU calumenin -0.0726075
KDM6A lysine (K)-specific demethylase 6A -0.0723844
LRP1B low density lipoprotein receptor-related protein 1B -0.071116
CLTC clathrin, heavy chain (Hc) -0.0709318
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0706508
PIBF1 progesterone immunomodulatory binding factor 1 -0.0701974
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.069921
PKM pyruvate kinase, muscle -0.068836
INHBA inhibin, beta A -0.0676221
RUNX1 runt-related transcription factor 1 -0.0612313
RPL11 ribosomal protein L11 -0.060668
AKAP12 A kinase (PRKA) anchor protein 12 -0.0599106
STC1 stanniocalcin 1 -0.0597479
SPAG9 sperm associated antigen 9 -0.0569166
RPL12 ribosomal protein L12 -0.056009
RTN4 reticulon 4 -0.0555614
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.055497
PRELID2 PRELI domain containing 2 -0.0544144
OGA O-GlcNAcase -0.0533672
RAB6A RAB6A, member RAS oncogene family -0.0531099
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0528388
FTL ferritin, light polypeptide -0.0521981
GARS1 glycyl-tRNA synthetase 1 -0.0515576
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0504175
EZR ezrin -0.0488909
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0478051
TM4SF1 transmembrane 4 L six family member 1 -0.0477242
GOLGB1 golgin B1 -0.04731
RBM39 RNA binding motif protein 39 -0.0471308
PDLIM5 PDZ and LIM domain 5 -0.0466694
RSF1 remodeling and spacing factor 1 -0.0463052
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0459138
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0458969
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0454803
JARID2 jumonji, AT rich interactive domain 2 -0.0434371
RPL35A ribosomal protein L35a -0.042774
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0407841
SRRM2 serine/arginine repetitive matrix 2 -0.0400063
FNDC3B fibronectin type III domain containing 3B -0.0399625
B2M beta-2-microglobulin -0.0394693
FBXO11 F-box protein 11 -0.0386746
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0385617
HLA-B major histocompatibility complex, class I, B -0.0385041
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) -0.0367491
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0365642
TMSB10 thymosin beta 10 -0.0354905
NPEPPS aminopeptidase puromycin sensitive -0.0354248
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0350468
SMC5 structural maintenance of chromosomes 5 -0.0349369
ANXA2 annexin A2 -0.0347687
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0340922
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0338742
ENO1 enolase 1, (alpha) -0.0335586
SLTM SAFB-like, transcription modulator -0.0335124
GNAS GNAS complex locus -0.0333654
LMAN1 lectin, mannose-binding, 1 -0.0328463
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0328203
EXT1 exostosin glycosyltransferase 1 -0.0318894
DST dystonin -0.030094
PGK1 phosphoglycerate kinase 1 -0.0289439
RPS12 ribosomal protein S12 -0.0268093
FNDC3A fibronectin type III domain containing 3A -0.0266259
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0237863
TJP1 tight junction protein 1 -0.0235562
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0235433
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0233677
RB1CC1 RB1-inducible coiled-coil 1 -0.0230683
IGFBP3 insulin-like growth factor binding protein 3 -0.0225397