| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in A-172 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Berbamine (dihydrochloride)_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | 0.309686 |
| FBN1 | fibrillin 1 | 0.211378 |
| ANXA2 | annexin A2 | 0.0983595 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0963779 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 0.0942282 |
| CD44 | CD44 molecule (Indian blood group) | 0.0832725 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.080668 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | 0.0774702 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | 0.0769853 |
| LOXL2 | lysyl oxidase-like 2 | 0.0749505 |
| KLF7 | Kruppel-like factor 7 (ubiquitous) | 0.0724989 |
| COL8A1 | collagen, type VIII, alpha 1 | 0.0702726 |
| VIM | vimentin | 0.065234 |
| IQGAP1 | IQ motif containing GTPase activating protein 1 | 0.0639613 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | 0.0636684 |
| ATP13A3 | ATPase type 13A3 | 0.0631448 |
| ELL2 | elongation factor, RNA polymerase II, 2 | 0.0585283 |
| NHS | Nance-Horan syndrome (congenital cataracts and dental anomalies) | 0.0583046 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | 0.05576 |
| COL1A2 | collagen, type I, alpha 2 | 0.055619 |
| COL3A1 | collagen, type III, alpha 1 | 0.0547405 |
| GLS2 | glutaminase 2 (liver, mitochondrial) | 0.0542474 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 0.0526121 |
| RTN4 | reticulon 4 | 0.0502839 |
| PDIA3 | protein disulfide isomerase family A, member 3 | 0.0494681 |
| PLAT | plasminogen activator, tissue | 0.0489402 |
| STC1 | stanniocalcin 1 | 0.0487884 |
| SOD2 | superoxide dismutase 2, mitochondrial | 0.0472003 |
| PALM2AKAP2 | PALM2 and AKAP2 fusion | 0.046417 |
| OGA | O-GlcNAcase | 0.0460674 |
| CD99 | CD99 molecule | 0.0458081 |
| UBC | ubiquitin C | 0.0450437 |
| SBF2 | SET binding factor 2 | 0.0434542 |
| LOX | lysyl oxidase | 0.0431014 |
| SLC6A6 | solute carrier family 6 (neurotransmitter transporter), member 6 | 0.041492 |
| DPYSL2 | dihydropyrimidinase-like 2 | 0.0407155 |
| ARL15 | ADP-ribosylation factor-like 15 | 0.039786 |
| OPTN | optineurin | 0.0397334 |
| AKT3 | v-akt murine thymoma viral oncogene homolog 3 | 0.0396351 |
| DPYSL3 | dihydropyrimidinase-like 3 | 0.0383176 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | 0.038282 |
| KIFAP3 | kinesin-associated protein 3 | 0.0380563 |
| ADAM17 | ADAM metallopeptidase domain 17 | 0.0380369 |
| GPC6 | glypican 6 | 0.0378933 |
| WWTR1 | WW domain containing transcription regulator 1 | 0.0371695 |
| NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 0.0369016 |
| ARRDC3 | arrestin domain containing 3 | 0.0366097 |
| TNIP1 | TNFAIP3 interacting protein 1 | 0.0365777 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | 0.0365351 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 0.0352121 |
| AP2B1 | adaptor-related protein complex 2, beta 1 subunit | 0.0351619 |
| MDM2 | MDM2 proto-oncogene, E3 ubiquitin protein ligase | 0.0347737 |
| YEATS2 | YEATS domain containing 2 | 0.0346596 |
| RHOBTB3 | Rho-related BTB domain containing 3 | 0.0346002 |
| SEPTIN9 | septin 9 | 0.0339905 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 0.0338659 |
| SPTBN1 | spectrin, beta, non-erythrocytic 1 | 0.0338339 |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta | 0.0337657 |
| GOLGA4 | golgin A4 | 0.0337469 |
| ANXA5 | annexin A5 | 0.0334822 |
| SQSTM1 | sequestosome 1 | 0.0332396 |
| LOC112694756 | uncharaterized LOC112694756 | 0.0330406 |
| NAV2 | neuron navigator 2 | 0.0327707 |
| TDRD7 | tudor domain containing 7 | 0.0321844 |
| DAB2 | Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) | 0.0321269 |
| WDFY1 | WD repeat and FYVE domain containing 1 | 0.0319752 |
| ITPRID2 | ITPR interacting domain containing 2 | 0.0319335 |
| MYH9 | myosin, heavy chain 9, non-muscle | 0.0318875 |
| FRMD5 | FERM domain containing 5 | 0.0315663 |
| CTSB | cathepsin B | 0.031534 |
| FADS2 | fatty acid desaturase 2 | 0.0310602 |
| RABGEF1 | RAB guanine nucleotide exchange factor (GEF) 1 | 0.0309684 |
| EIF4H | eukaryotic translation initiation factor 4H | 0.0306349 |
| DST | dystonin | 0.0305589 |
| MMAB | methylmalonic aciduria (cobalamin deficiency) cblB type | 0.0299973 |
| CLIP2 | CAP-GLY domain containing linker protein 2 | 0.0291805 |
| AHNAK2 | AHNAK nucleoprotein 2 | 0.0289944 |
| ZBTB7C | zinc finger and BTB domain containing 7C | 0.0289559 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | 0.0286022 |
| FTH1 | ferritin, heavy polypeptide 1 | 0.0283768 |
| ZNF148 | zinc finger protein 148 | 0.0283329 |
| RAB6A | RAB6A, member RAS oncogene family | 0.0281969 |
| FNIP1 | folliculin interacting protein 1 | 0.0280902 |
| EIF1 | eukaryotic translation initiation factor 1 | 0.028068 |
| ACTR2 | ARP2 actin-related protein 2 homolog (yeast) | 0.0275952 |
| ARPC2 | actin related protein 2/3 complex, subunit 2, 34kDa | 0.0274294 |
| GULP1 | GULP, engulfment adaptor PTB domain containing 1 | 0.0271202 |
| UAP1 | UDP-N-acetylglucosamine pyrophosphorylase 1 | 0.0269684 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | 0.0267077 |
| YWHAQ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta | 0.0266295 |
| C1GALT1 | core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 | 0.0264469 |
| HUWE1 | HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase | 0.0263715 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 | 0.0259775 |
| JMJD1C | jumonji domain containing 1C | 0.0259542 |
| VCL | vinculin | 0.0256536 |
| TMOD1 | tropomodulin 1 | 0.0254691 |
| AP2M1 | adaptor-related protein complex 2, mu 1 subunit | 0.0252901 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0250413 |
| UBAP1 | ubiquitin associated protein 1 | 0.0248717 |
| MXI1 | MAX interactor 1, dimerization protein | 0.0247739 |
| Symbol | Name | Standardized Value |
|---|---|---|
| MT2A | metallothionein 2A | -0.191157 |
| COL5A1 | collagen, type V, alpha 1 | -0.160125 |
| ADAMTS6 | ADAM metallopeptidase with thrombospondin type 1 motif, 6 | -0.158735 |
| CDH13 | cadherin 13 | -0.14026 |
| TMSB10 | thymosin beta 10 | -0.130779 |
| ZC3HAV1 | zinc finger CCCH-type, antiviral 1 | -0.0975518 |
| ABI3BP | ABI family, member 3 (NESH) binding protein | -0.0968858 |
| FN1 | fibronectin 1 | -0.0931506 |
| RIGI | RNA sensor RIG-I | -0.09109 |
| KCNQ5 | potassium channel, voltage gated KQT-like subfamily Q, member 5 | -0.0881678 |
| SPARC | secreted protein, acidic, cysteine-rich (osteonectin) | -0.083993 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 | -0.0744964 |
| SAMD9 | sterile alpha motif domain containing 9 | -0.0712712 |
| CACNA2D3 | calcium channel, voltage-dependent, alpha 2/delta subunit 3 | -0.0647079 |
| MT1X | metallothionein 1X | -0.0633281 |
| RSAD2 | radical S-adenosyl methionine domain containing 2 | -0.058437 |
| MAP4K4 | mitogen-activated protein kinase kinase kinase kinase 4 | -0.0579854 |
| EFNA5 | ephrin-A5 | -0.0524822 |
| RNF213 | ring finger protein 213 | -0.0501706 |
| TRIO | trio Rho guanine nucleotide exchange factor | -0.0461457 |
| SLC39A11 | solute carrier family 39, member 11 | -0.0441443 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0435192 |
| ASPH | aspartate beta-hydroxylase | -0.0415914 |
| MAP1B | microtubule-associated protein 1B | -0.041403 |
| ADARB1 | adenosine deaminase, RNA-specific, B1 | -0.0397122 |
| RPS6KC1 | ribosomal protein S6 kinase, 52kDa, polypeptide 1 | -0.0363757 |
| AHNAK | AHNAK nucleoprotein | -0.0357789 |
| MACF1 | microtubule-actin crosslinking factor 1 | -0.0356961 |
| IFIT3 | interferon-induced protein with tetratricopeptide repeats 3 | -0.0356175 |
| RPS6KA2 | ribosomal protein S6 kinase, 90kDa, polypeptide 2 | -0.0354891 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | -0.0350549 |
| HNRNPH1 | heterogeneous nuclear ribonucleoprotein H1 (H) | -0.0333338 |
| CAVIN1 | caveolae associated protein 1 | -0.0332095 |
| SORBS2 | sorbin and SH3 domain containing 2 | -0.0330017 |
| DIRAS3 | DIRAS family, GTP-binding RAS-like 3 | -0.0325541 |
| PCDH7 | protocadherin 7 | -0.0321473 |
| ITGA3 | integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) | -0.0318318 |
| TEAD1 | TEA domain family member 1 (SV40 transcriptional enhancer factor) | -0.0304631 |
| LMNA | lamin A/C | -0.0302193 |
| DGKG | diacylglycerol kinase, gamma 90kDa | -0.0301174 |
| OASL | 2'-5'-oligoadenylate synthetase-like | -0.0299142 |
| INTS6 | integrator complex subunit 6 | -0.0292863 |
| PLXNA2 | plexin A2 | -0.0289819 |
| SLC38A1 | solute carrier family 38, member 1 | -0.0288613 |
| MX2 | MX dynamin-like GTPase 2 | -0.0281132 |
| PRSS23 | protease, serine, 23 | -0.0280344 |
| IL7R | interleukin 7 receptor | -0.0273898 |
| TNS3 | tensin 3 | -0.0269621 |
| IARS1 | isoleucyl-tRNA synthetase 1 | -0.0259972 |
| FLT1 | fms-related tyrosine kinase 1 | -0.0257755 |
| MBNL1 | muscleblind-like splicing regulator 1 | -0.0251558 |
| SH3RF3 | SH3 domain containing ring finger 3 | -0.0249498 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | -0.0246974 |
| CENPF | centromere protein F, 350/400kDa | -0.0244551 |
| MTHFD1L | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like | -0.0240321 |
| SP100 | SP100 nuclear antigen | -0.0239314 |
| ITGA5 | integrin, alpha 5 (fibronectin receptor, alpha polypeptide) | -0.0235542 |
| EGFR | epidermal growth factor receptor | -0.0229434 |
| AEBP2 | AE binding protein 2 | -0.0228335 |
| DIAPH3 | diaphanous-related formin 3 | -0.022809 |
| ANKRD11 | ankyrin repeat domain 11 | -0.0223432 |
| CUX1 | cut-like homeobox 1 | -0.0222354 |
| MED13L | mediator complex subunit 13-like | -0.0222311 |
| ALCAM | activated leukocyte cell adhesion molecule | -0.0221165 |
| LDLRAD4 | low density lipoprotein receptor class A domain containing 4 | -0.0220275 |
| FSTL1 | follistatin-like 1 | -0.0220162 |
| KIAA1549L | KIAA1549-like | -0.0219362 |
| RPTOR | regulatory associated protein of MTOR, complex 1 | -0.0219035 |
| SDCCAG8 | serologically defined colon cancer antigen 8 | -0.0218835 |
| TMSB4X | thymosin beta 4, X-linked | -0.0217602 |
| SYT1 | synaptotagmin I | -0.0217435 |
| VEGFA | vascular endothelial growth factor A | -0.0216313 |
| NALF1 | NALCN channel auxiliary factor 1 | -0.0216249 |
| PEA15 | phosphoprotein enriched in astrocytes 15 | -0.0215191 |
| TPM1 | tropomyosin 1 (alpha) | -0.0214482 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0213758 |
| OR51B5 | olfactory receptor, family 51, subfamily B, member 5 | -0.0213472 |
| COL6A1 | collagen, type VI, alpha 1 | -0.0211832 |
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 | -0.0211556 |
| TBCA | tubulin folding cofactor A | -0.0208315 |
| TAGLN2 | transgelin 2 | -0.0205109 |
| DDX60 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 | -0.0203986 |
| HLA-B | major histocompatibility complex, class I, B | -0.020373 |
| PODXL | podocalyxin-like | -0.0203359 |
| IFITM3 | interferon induced transmembrane protein 3 | -0.0201596 |
| SLC25A37 | solute carrier family 25 (mitochondrial iron transporter), member 37 | -0.0201445 |
| MCL1 | myeloid cell leukemia 1 | -0.0201055 |
| SMC4 | structural maintenance of chromosomes 4 | -0.0201015 |
| PBX3 | pre-B-cell leukemia homeobox 3 | -0.0199799 |
| BRIP1 | BRCA1 interacting protein C-terminal helicase 1 | -0.0198668 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | -0.0196718 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | -0.0196407 |
| RAD51B | RAD51 paralog B | -0.0195203 |
| PLCB4 | phospholipase C, beta 4 | -0.0194203 |
| ATF4 | activating transcription factor 4 | -0.0192939 |
| NAV1 | neuron navigator 1 | -0.0192876 |
| SLCO1B3-SLCO1B7 | SLCO1B3-SLCO1B7 readthrough | -0.0190737 |
| FNDC3A | fibronectin type III domain containing 3A | -0.0190367 |
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | -0.0187747 |
| SEC61G | Sec61 gamma subunit | -0.0187151 |
