| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in AN3 CA cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Berbamine (dihydrochloride)_AN3 CA drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| PRKG1 | protein kinase, cGMP-dependent, type I | 0.0866463 |
| PRELID2 | PRELI domain containing 2 | 0.0687562 |
| ARID1B | AT rich interactive domain 1B (SWI1-like) | 0.0542081 |
| MED13L | mediator complex subunit 13-like | 0.053607 |
| TRA2A | transformer 2 alpha homolog (Drosophila) | 0.0534233 |
| FGFR1 | fibroblast growth factor receptor 1 | 0.0505637 |
| ARHGAP21 | Rho GTPase activating protein 21 | 0.0501308 |
| THSD4 | thrombospondin, type I, domain containing 4 | 0.0490889 |
| EIF4H | eukaryotic translation initiation factor 4H | 0.0481025 |
| OGA | O-GlcNAcase | 0.0448247 |
| KAZN | kazrin, periplakin interacting protein | 0.0446581 |
| PRRC2A | proline-rich coiled-coil 2A | 0.0435652 |
| PDE10A | phosphodiesterase 10A | 0.0430597 |
| FGFR2 | fibroblast growth factor receptor 2 | 0.0413861 |
| NFIB | nuclear factor I/B | 0.0385204 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0376187 |
| DYNC1H1 | dynein, cytoplasmic 1, heavy chain 1 | 0.0371946 |
| SFPQ | splicing factor proline/glutamine-rich | 0.036822 |
| CLTC | clathrin, heavy chain (Hc) | 0.0356389 |
| XPO1 | exportin 1 | 0.0334743 |
| EYA1 | EYA transcriptional coactivator and phosphatase 1 | 0.0332339 |
| CDK19 | cyclin-dependent kinase 19 | 0.0323439 |
| TRERF1 | transcriptional regulating factor 1 | 0.0321561 |
| BTAF1 | BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa | 0.0319983 |
| MEOX2 | mesenchyme homeobox 2 | 0.031851 |
| UBE2G2 | ubiquitin-conjugating enzyme E2G 2 | 0.0300883 |
| FBXL7 | F-box and leucine-rich repeat protein 7 | 0.0292756 |
| ATG5 | autophagy related 5 | 0.0289322 |
| KDM6A | lysine (K)-specific demethylase 6A | 0.0282956 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | 0.0277175 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | 0.0275187 |
| DNAJC1 | DnaJ (Hsp40) homolog, subfamily C, member 1 | 0.0274905 |
| ITGAV | integrin, alpha V | 0.0271434 |
| RPL3 | ribosomal protein L3 | 0.0268769 |
| BCLAF1 | BCL2-associated transcription factor 1 | 0.0266728 |
| LOC112694756 | uncharaterized LOC112694756 | 0.0264391 |
| ADNP | activity-dependent neuroprotector homeobox | 0.0264174 |
| EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 0.026303 |
| YEATS2 | YEATS domain containing 2 | 0.0262502 |
| PANK3 | pantothenate kinase 3 | 0.0261591 |
| ERBIN | erbb2 interacting protein | 0.0261478 |
| PARD3 | par-3 family cell polarity regulator | 0.0260114 |
| RBM33 | RNA binding motif protein 33 | 0.0259111 |
| FLNA | filamin A, alpha | 0.0258596 |
| ZNF207 | zinc finger protein 207 | 0.0256952 |
| VEZT | vezatin, adherens junctions transmembrane protein | 0.0254557 |
| DIPK2A | divergent protein kinase domain 2A | 0.0254328 |
| PIAS2 | protein inhibitor of activated STAT, 2 | 0.0253279 |
| CAMTA1 | calmodulin binding transcription activator 1 | 0.0252609 |
| NCKAP1 | NCK-associated protein 1 | 0.0250194 |
| FMNL2 | formin-like 2 | 0.0249331 |
| ADGRA3 | adhesion G protein-coupled receptor A3 | 0.024313 |
| RIMKLB | ribosomal modification protein rimK-like family member B | 0.0243066 |
| BCKDHB | branched chain keto acid dehydrogenase E1, beta polypeptide | 0.0240396 |
| EPC1 | enhancer of polycomb homolog 1 (Drosophila) | 0.0240107 |
| ROBO1 | roundabout, axon guidance receptor, homolog 1 (Drosophila) | 0.0238734 |
| UBA6 | ubiquitin-like modifier activating enzyme 6 | 0.0236872 |
| FBN1 | fibrillin 1 | 0.0231722 |
| HNRNPH3 | heterogeneous nuclear ribonucleoprotein H3 (2H9) | 0.0230906 |
| KIAA1958 | KIAA1958 | 0.023062 |
| DNAJB6 | DnaJ (Hsp40) homolog, subfamily B, member 6 | 0.0230502 |
| PDIA3 | protein disulfide isomerase family A, member 3 | 0.0230439 |
| BCOR | BCL6 corepressor | 0.0227959 |
| MRTFA | myocardin related transcription factor A | 0.0223716 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | 0.0223478 |
| PRKN | parkin RBR E3 ubiquitin protein ligase | 0.022208 |
| NR1D2 | nuclear receptor subfamily 1, group D, member 2 | 0.0221326 |
| ATG10 | autophagy related 10 | 0.0219554 |
| NAV1 | neuron navigator 1 | 0.02191 |
| MEIS2 | Meis homeobox 2 | 0.0217316 |
| NCOR1 | nuclear receptor corepressor 1 | 0.0214944 |
| TNRC6B | trinucleotide repeat containing 6B | 0.0214741 |
| SMCHD1 | structural maintenance of chromosomes flexible hinge domain containing 1 | 0.0214652 |
| PDSS2 | prenyl (decaprenyl) diphosphate synthase, subunit 2 | 0.021459 |
| HOXA3 | homeobox A3 | 0.0212991 |
| MAP2K5 | mitogen-activated protein kinase kinase 5 | 0.0211682 |
| CABIN1 | calcineurin binding protein 1 | 0.0211108 |
| TET3 | tet methylcytosine dioxygenase 3 | 0.0210962 |
| NSD1 | nuclear receptor binding SET domain protein 1 | 0.0209928 |
| DNAAF9 | dynein axonemal assembly factor 9 | 0.020953 |
| RNF130 | ring finger protein 130 | 0.0209515 |
| LINGO2 | leucine rich repeat and Ig domain containing 2 | 0.0209126 |
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 | 0.0208132 |
| TNRC18 | trinucleotide repeat containing 18 | 0.020607 |
| ARID1A | AT rich interactive domain 1A (SWI-like) | 0.0205929 |
| FOXO3 | forkhead box O3 | 0.0203594 |
| ITCH | itchy E3 ubiquitin protein ligase | 0.020323 |
| AP2B1 | adaptor-related protein complex 2, beta 1 subunit | 0.0198796 |
| JARID2 | jumonji, AT rich interactive domain 2 | 0.019866 |
| JMJD1C | jumonji domain containing 1C | 0.0197631 |
| PCM1 | pericentriolar material 1 | 0.0197405 |
| ARHGAP12 | Rho GTPase activating protein 12 | 0.0195527 |
| ZRANB1 | zinc finger, RAN-binding domain containing 1 | 0.0193579 |
| RAB14 | RAB14, member RAS oncogene family | 0.019246 |
| BRWD1 | bromodomain and WD repeat domain containing 1 | 0.0191401 |
| N4BP2L2 | NEDD4 binding protein 2-like 2 | 0.018959 |
| CALR | calreticulin | 0.0188601 |
| RERE | arginine-glutamic acid dipeptide (RE) repeats | 0.0188021 |
| FCHSD2 | FCH and double SH3 domains 2 | 0.0187875 |
| ALG9 | ALG9, alpha-1,2-mannosyltransferase | 0.0187235 |
| Symbol | Name | Standardized Value |
|---|---|---|
| VIM | vimentin | -0.218837 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.215777 |
| PTMA | prothymosin, alpha | -0.108416 |
| TMSB10 | thymosin beta 10 | -0.100219 |
| RPS8 | ribosomal protein S8 | -0.0879142 |
| IER3 | immediate early response 3 | -0.0809417 |
| RPS6 | ribosomal protein S6 | -0.0791585 |
| MT2A | metallothionein 2A | -0.0751982 |
| LDHA | lactate dehydrogenase A | -0.0748362 |
| RPLP1 | ribosomal protein, large, P1 | -0.0645024 |
| RPS27A | ribosomal protein S27a | -0.0630259 |
| MAP1B | microtubule-associated protein 1B | -0.0621572 |
| RPL31 | ribosomal protein L31 | -0.0607038 |
| MKI67 | marker of proliferation Ki-67 | -0.059061 |
| RPL34 | ribosomal protein L34 | -0.0588233 |
| RPS13 | ribosomal protein S13 | -0.0588216 |
| RPLP2 | ribosomal protein, large, P2 | -0.0580447 |
| VEGFA | vascular endothelial growth factor A | -0.0578709 |
| CADM2 | cell adhesion molecule 2 | -0.0575827 |
| RAD21 | RAD21 homolog (S. pombe) | -0.0574268 |
| PEG10 | paternally expressed 10 | -0.0571217 |
| RPS14 | ribosomal protein S14 | -0.0555851 |
| MGP | matrix Gla protein | -0.0539691 |
| SOX4 | SRY (sex determining region Y)-box 4 | -0.0534464 |
| HMGA2 | high mobility group AT-hook 2 | -0.0527773 |
| ENO1 | enolase 1, (alpha) | -0.0524481 |
| RPLP0 | ribosomal protein, large, P0 | -0.0520706 |
| TCF12 | transcription factor 12 | -0.0508103 |
| FTL | ferritin, light polypeptide | -0.0503425 |
| ACTG1 | actin gamma 1 | -0.0487621 |
| RPL35A | ribosomal protein L35a | -0.0485476 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0483757 |
| RPS19 | ribosomal protein S19 | -0.0472312 |
| CENPF | centromere protein F, 350/400kDa | -0.0464882 |
| S100A9 | S100 calcium binding protein A9 | -0.0454712 |
| RPL12 | ribosomal protein L12 | -0.045195 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.0448469 |
| RPS4X | ribosomal protein S4, X-linked | -0.0441743 |
| FN1 | fibronectin 1 | -0.0440057 |
| RPL37A | ribosomal protein L37a | -0.0432589 |
| TMSB4X | thymosin beta 4, X-linked | -0.0432022 |
| RPS23 | ribosomal protein S23 | -0.0430559 |
| FNDC3B | fibronectin type III domain containing 3B | -0.0430156 |
| HDLBP | high density lipoprotein binding protein | -0.0413085 |
| RPS24 | ribosomal protein S24 | -0.0411168 |
| RPS11 | ribosomal protein S11 | -0.0410514 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | -0.0406582 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0402913 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | -0.0400082 |
| HNRNPA1 | heterogeneous nuclear ribonucleoprotein A1 | -0.0389364 |
| AHNAK | AHNAK nucleoprotein | -0.0384336 |
| RPL23 | ribosomal protein L23 | -0.0382546 |
| DLG1 | discs, large homolog 1 (Drosophila) | -0.038213 |
| HMGA1 | high mobility group AT-hook 1 | -0.0376546 |
| HMGB1 | high mobility group box 1 | -0.0376395 |
| ASPH | aspartate beta-hydroxylase | -0.0362701 |
| ZNF292 | zinc finger protein 292 | -0.0361983 |
| PGK1 | phosphoglycerate kinase 1 | -0.0357603 |
| LOC102724023 | ES1 protein homolog, mitochondrial | -0.0355486 |
| PAPOLA | poly(A) polymerase alpha | -0.034528 |
| RAI1 | retinoic acid induced 1 | -0.0343321 |
| RACK1 | receptor for activated C kinase 1 | -0.0337691 |
| CENPE | centromere protein E, 312kDa | -0.0331525 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0330875 |
| RPL37 | ribosomal protein L37 | -0.0328043 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0326857 |
| TPM4 | tropomyosin 4 | -0.0326624 |
| SFTPA2 | surfactant protein A2 | -0.0324519 |
| HSPA9 | heat shock 70kDa protein 9 (mortalin) | -0.0323147 |
| RAB7A | RAB7A, member RAS oncogene family | -0.0322048 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0322013 |
| RPS29 | ribosomal protein S29 | -0.0321883 |
| RPL28 | ribosomal protein L28 | -0.0319635 |
| COG5 | component of oligomeric golgi complex 5 | -0.0318642 |
| SLC5A3 | solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 | -0.0316435 |
| ZFAND3 | zinc finger, AN1-type domain 3 | -0.0311695 |
| FOXC1 | forkhead box C1 | -0.0310846 |
| CUX1 | cut-like homeobox 1 | -0.0308577 |
| UBE2H | ubiquitin-conjugating enzyme E2H | -0.0307438 |
| GLG1 | golgi glycoprotein 1 | -0.0291138 |
| RPL38 | ribosomal protein L38 | -0.0282735 |
| UBA52 | ubiquitin A-52 residue ribosomal protein fusion product 1 | -0.0278907 |
| B2M | beta-2-microglobulin | -0.0278854 |
| POTEF | POTE ankyrin domain family, member F | -0.0277337 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.0273305 |
| SREK1 | splicing regulatory glutamine/lysine-rich protein 1 | -0.0272477 |
| ZNF106 | zinc finger protein 106 | -0.0272341 |
| RPS21 | ribosomal protein S21 | -0.0270077 |
| RPL7A | ribosomal protein L7a | -0.0269856 |
| UBC | ubiquitin C | -0.0268414 |
| HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | -0.0266836 |
| RPL26 | ribosomal protein L26 | -0.0266331 |
| CALD1 | caldesmon 1 | -0.0262446 |
| RPS25 | ribosomal protein S25 | -0.0261737 |
| CWC27 | CWC27 spliceosome-associated protein homolog (S. cerevisiae) | -0.0261312 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | -0.0260629 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0260397 |
| FAM162A | family with sequence similarity 162, member A | -0.0259977 |
| ZFP36L1 | ZFP36 ring finger protein-like 1 | -0.0257459 |
| ILF3 | interleukin enhancer binding factor 3, 90kDa | -0.0257457 |
