| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in C32 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Berbamine (dihydrochloride)_C32 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| FN1 | fibronectin 1 | 0.272294 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.100109 |
| NDRG1 | N-myc downstream regulated 1 | 0.0897328 |
| EIF4H | eukaryotic translation initiation factor 4H | 0.0742393 |
| CD109 | CD109 molecule | 0.068831 |
| LOC112694756 | uncharaterized LOC112694756 | 0.059794 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | 0.0578385 |
| NAV2 | neuron navigator 2 | 0.0543001 |
| PRKRIP1 | PRKR interacting protein 1 (IL11 inducible) | 0.0483852 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | 0.047097 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | 0.0461721 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 | 0.045501 |
| PTTG1IP | pituitary tumor-transforming 1 interacting protein | 0.0440387 |
| KIRREL1 | kirre like nephrin family adhesion molecule 1 | 0.0436637 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 | 0.042606 |
| GOLGA4 | golgin A4 | 0.042583 |
| CHSY1 | chondroitin sulfate synthase 1 | 0.0421433 |
| CENPF | centromere protein F, 350/400kDa | 0.0405119 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0398963 |
| EEF2 | eukaryotic translation elongation factor 2 | 0.0395842 |
| HLA-C | major histocompatibility complex, class I, C | 0.0391996 |
| TAC4 | tachykinin 4 (hemokinin) | 0.0387665 |
| TBC1D22A | TBC1 domain family, member 22A | 0.0383932 |
| HSPG2 | heparan sulfate proteoglycan 2 | 0.0363801 |
| VEGFA | vascular endothelial growth factor A | 0.0348828 |
| PRELID2 | PRELI domain containing 2 | 0.0330229 |
| FBXO7 | F-box protein 7 | 0.0329967 |
| BACE2 | beta-site APP-cleaving enzyme 2 | 0.0322523 |
| P4HB | prolyl 4-hydroxylase, beta polypeptide | 0.0320202 |
| FYN | FYN proto-oncogene, Src family tyrosine kinase | 0.0318184 |
| IGF2 | insulin-like growth factor 2 | 0.0316201 |
| PPFIA4 | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 | 0.03013 |
| BHLHE40 | basic helix-loop-helix family, member e40 | 0.0300061 |
| FOSL1 | FOS-like antigen 1 | 0.0294538 |
| HLA-B | major histocompatibility complex, class I, B | 0.0291941 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0290109 |
| TIMP3 | TIMP metallopeptidase inhibitor 3 | 0.0287382 |
| RNF213 | ring finger protein 213 | 0.0286064 |
| MRPS6 | mitochondrial ribosomal protein S6 | 0.0285 |
| MMAB | methylmalonic aciduria (cobalamin deficiency) cblB type | 0.027896 |
| SLC6A6 | solute carrier family 6 (neurotransmitter transporter), member 6 | 0.0273656 |
| GNPDA1 | glucosamine-6-phosphate deaminase 1 | 0.0269371 |
| SCARB1 | scavenger receptor class B, member 1 | 0.0264614 |
| SET | SET nuclear proto-oncogene | 0.0263926 |
| STXBP1 | syntaxin binding protein 1 | 0.0258115 |
| RPS12 | ribosomal protein S12 | 0.0246722 |
| PDK3 | pyruvate dehydrogenase kinase, isozyme 3 | 0.0242835 |
| LMNA | lamin A/C | 0.0232417 |
| TIMP2 | TIMP metallopeptidase inhibitor 2 | 0.0226639 |
| PLCG1 | phospholipase C, gamma 1 | 0.0216477 |
| PRRC2C | proline-rich coiled-coil 2C | 0.0214736 |
| NCOA1 | nuclear receptor coactivator 1 | 0.0212056 |
| CEP250 | centrosomal protein 250kDa | 0.0210399 |
| HMGCS1 | 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) | 0.0207865 |
| RAB6A | RAB6A, member RAS oncogene family | 0.0206605 |
| SERGEF | secretion regulating guanine nucleotide exchange factor | 0.0205339 |
| MFSD12 | major facilitator superfamily domain containing 12 | 0.0204439 |
| CLMN | calmin (calponin-like, transmembrane) | 0.0202282 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | 0.0201322 |
| PTPRJ | protein tyrosine phosphatase, receptor type, J | 0.0200085 |
| MMP14 | matrix metallopeptidase 14 (membrane-inserted) | 0.0198083 |
| FAM162A | family with sequence similarity 162, member A | 0.0196338 |
| ANO6 | anoctamin 6 | 0.0195826 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | 0.0194779 |
| SMG1 | SMG1 phosphatidylinositol 3-kinase-related kinase | 0.0194353 |
| RPL3 | ribosomal protein L3 | 0.0192047 |
| TMEM255B | transmembrane protein 255B | 0.0191507 |
| FLNA | filamin A, alpha | 0.0191084 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0189961 |
| CABIN1 | calcineurin binding protein 1 | 0.0188565 |
| PRKCE | protein kinase C, epsilon | 0.0187162 |
| GRK5 | G protein-coupled receptor kinase 5 | 0.0186784 |
| HLA-A | major histocompatibility complex, class I, A | 0.0184925 |
| SSH1 | slingshot protein phosphatase 1 | 0.0184565 |
| STRIP2 | striatin interacting protein 2 | 0.0184382 |
| SRRT | serrate, RNA effector molecule | 0.0182411 |
| SDC3 | syndecan 3 | 0.0182017 |
| ATXN1 | ataxin 1 | 0.0179016 |
| PPP1R15A | protein phosphatase 1, regulatory subunit 15A | 0.0177866 |
| PTPRD | protein tyrosine phosphatase, receptor type, D | 0.0177476 |
| RNASE12 | ribonuclease, RNase A family, 12 (non-active) | 0.01772 |
| LHFPL2 | lipoma HMGIC fusion partner-like 2 | 0.0177057 |
| RPL27 | ribosomal protein L27 | 0.0176554 |
| RACK1 | receptor for activated C kinase 1 | 0.0176027 |
| ZNF148 | zinc finger protein 148 | 0.0175781 |
| FBXO42 | F-box protein 42 | 0.0175639 |
| TPR | translocated promoter region, nuclear basket protein | 0.0175014 |
| HILPDA | hypoxia inducible lipid droplet-associated | 0.0173882 |
| SREBF2 | sterol regulatory element binding transcription factor 2 | 0.0173835 |
| HDGF | hepatoma-derived growth factor | 0.0173471 |
| PFKFB4 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 | 0.017093 |
| UBE4B | ubiquitination factor E4B | 0.0170125 |
| TMEM41B | transmembrane protein 41B | 0.0170012 |
| RILPL1 | Rab interacting lysosomal protein-like 1 | 0.0168837 |
| FOXN3 | forkhead box N3 | 0.0168804 |
| UACA | uveal autoantigen with coiled-coil domains and ankyrin repeats | 0.0168454 |
| PITPNC1 | phosphatidylinositol transfer protein, cytoplasmic 1 | 0.0168438 |
| POM121 | POM121 transmembrane nucleoporin | 0.0167462 |
| HIP1 | huntingtin interacting protein 1 | 0.016524 |
| KDM2B | lysine (K)-specific demethylase 2B | 0.0164702 |
| Symbol | Name | Standardized Value |
|---|---|---|
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.420435 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | -0.183355 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | -0.121505 |
| IFI16 | interferon, gamma-inducible protein 16 | -0.110524 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.100538 |
| FMN1 | formin 1 | -0.0992379 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0868265 |
| PDIA4 | protein disulfide isomerase family A, member 4 | -0.0825808 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0823098 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | -0.0719625 |
| GPC6 | glypican 6 | -0.070266 |
| UBE2H | ubiquitin-conjugating enzyme E2H | -0.0702204 |
| MKLN1 | muskelin 1, intracellular mediator containing kelch motifs | -0.0651291 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | -0.0601763 |
| MTPN | myotrophin | -0.0554545 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0548378 |
| PTMA | prothymosin, alpha | -0.0540148 |
| MACROD2 | MACRO domain containing 2 | -0.0486456 |
| ZBTB20 | zinc finger and BTB domain containing 20 | -0.048103 |
| COL19A1 | collagen, type XIX, alpha 1 | -0.0480406 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.047788 |
| BRIP1 | BRCA1 interacting protein C-terminal helicase 1 | -0.0468987 |
| RHEB | Ras homolog enriched in brain | -0.0468065 |
| MT2A | metallothionein 2A | -0.0432478 |
| IFRD1 | interferon-related developmental regulator 1 | -0.0425239 |
| MAGI2 | membrane associated guanylate kinase, WW and PDZ domain containing 2 | -0.039621 |
| UBR5 | ubiquitin protein ligase E3 component n-recognin 5 | -0.0387855 |
| EGLN3 | egl-9 family hypoxia-inducible factor 3 | -0.037866 |
| UBC | ubiquitin C | -0.0376111 |
| IER3 | immediate early response 3 | -0.0374408 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0366846 |
| NAV3 | neuron navigator 3 | -0.0362405 |
| LRMDA | leucine rich melanocyte differentiation associated | -0.0361352 |
| HMCN1 | hemicentin 1 | -0.0361344 |
| CPED1 | cadherin-like and PC-esterase domain containing 1 | -0.0361009 |
| AHNAK | AHNAK nucleoprotein | -0.0354828 |
| RBPJ | recombination signal binding protein for immunoglobulin kappa J region | -0.0353486 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | -0.0344364 |
| SOX5 | SRY (sex determining region Y)-box 5 | -0.034411 |
| ARHGAP5 | Rho GTPase activating protein 5 | -0.0342867 |
| CALU | calumenin | -0.0338977 |
| COG5 | component of oligomeric golgi complex 5 | -0.0337727 |
| S100A6 | S100 calcium binding protein A6 | -0.0336025 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | -0.0335975 |
| PTCHD4 | patched domain containing 4 | -0.0335576 |
| FUS | FUS RNA binding protein | -0.0327271 |
| TMTC2 | transmembrane and tetratricopeptide repeat containing 2 | -0.0321972 |
| HIVEP3 | human immunodeficiency virus type I enhancer binding protein 3 | -0.0316866 |
| SLC25A36 | solute carrier family 25 (pyrimidine nucleotide carrier), member 36 | -0.0313641 |
| TFG | TRK-fused gene | -0.031255 |
| FMNL2 | formin-like 2 | -0.0311264 |
| RLF | rearranged L-myc fusion | -0.0310058 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 | -0.0309943 |
| EXOC4 | exocyst complex component 4 | -0.0304765 |
| TPM4 | tropomyosin 4 | -0.0303283 |
| PTGS2 | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) | -0.0303005 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | -0.0300239 |
| COPA | coatomer protein complex, subunit alpha | -0.0297646 |
| VIM | vimentin | -0.029342 |
| TNPO3 | transportin 3 | -0.0292277 |
| S100A10 | S100 calcium binding protein A10 | -0.029016 |
| NCOA7 | nuclear receptor coactivator 7 | -0.0289708 |
| ZC3H11A | zinc finger CCCH-type containing 11A | -0.0288684 |
| STAU1 | staufen double-stranded RNA binding protein 1 | -0.0282311 |
| UBE2D3 | ubiquitin-conjugating enzyme E2D 3 | -0.0281665 |
| PDIA3 | protein disulfide isomerase family A, member 3 | -0.0281596 |
| RHOJ | ras homolog family member J | -0.0281232 |
| FHIT | fragile histidine triad | -0.0278982 |
| RPS6KA3 | ribosomal protein S6 kinase, 90kDa, polypeptide 3 | -0.0274385 |
| TRA2A | transformer 2 alpha homolog (Drosophila) | -0.0271183 |
| INPP5F | inositol polyphosphate-5-phosphatase F | -0.0270212 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0261717 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | -0.0259403 |
| EGR1 | early growth response 1 | -0.0258888 |
| TSC22D1 | TSC22 domain family, member 1 | -0.0258265 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | -0.0258199 |
| BICD1 | bicaudal D homolog 1 (Drosophila) | -0.0256329 |
| SUCO | SUN domain containing ossification factor | -0.0254197 |
| SDCBP | syndecan binding protein (syntenin) | -0.0248254 |
| TAGLN2 | transgelin 2 | -0.0247523 |
| HELZ | helicase with zinc finger | -0.024613 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.0244534 |
| ITGB3 | integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) | -0.0243608 |
| IFITM1 | interferon induced transmembrane protein 1 | -0.0243504 |
| NPAS2 | neuronal PAS domain protein 2 | -0.0243156 |
| PARD3B | par-3 family cell polarity regulator beta | -0.024156 |
| YWHAZ | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta | -0.024112 |
| FRMD5 | FERM domain containing 5 | -0.0239647 |
| LEF1 | lymphoid enhancer-binding factor 1 | -0.0238118 |
| TM4SF1 | transmembrane 4 L six family member 1 | -0.0235222 |
| GNAQ | guanine nucleotide binding protein (G protein), q polypeptide | -0.0234869 |
| PXMP2 | peroxisomal membrane protein 2, 22kDa | -0.0234857 |
| CDK14 | cyclin-dependent kinase 14 | -0.0234393 |
| RYBP | RING1 and YY1 binding protein | -0.0231848 |
| DIAPH3 | diaphanous-related formin 3 | -0.0231485 |
| EHBP1 | EH domain binding protein 1 | -0.0230012 |
| MITF | microphthalmia-associated transcription factor | -0.0229425 |
| CSNK1A1 | casein kinase 1, alpha 1 | -0.0227283 |
| VPS13B | vacuolar protein sorting 13 homolog B (yeast) | -0.0227065 |
| TM9SF3 | transmembrane 9 superfamily member 3 | -0.0226819 |
