| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in CFPAC-1 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Berbamine (dihydrochloride)_CFPAC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.184349 |
| FTH1 | ferritin, heavy polypeptide 1 | 0.102805 |
| HLA-C | major histocompatibility complex, class I, C | 0.0994094 |
| TMSB10 | thymosin beta 10 | 0.0867392 |
| LAMB3 | laminin, beta 3 | 0.0826018 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | 0.0821317 |
| F3 | coagulation factor III (thromboplastin, tissue factor) | 0.0694101 |
| RBPJ | recombination signal binding protein for immunoglobulin kappa J region | 0.0678279 |
| LOC112694756 | uncharaterized LOC112694756 | 0.065642 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | 0.0610422 |
| NDRG1 | N-myc downstream regulated 1 | 0.0605695 |
| AHNAK2 | AHNAK nucleoprotein 2 | 0.0576045 |
| MT1X | metallothionein 1X | 0.0553738 |
| RPL35A | ribosomal protein L35a | 0.0486373 |
| ENO1 | enolase 1, (alpha) | 0.0476126 |
| PPP1R15A | protein phosphatase 1, regulatory subunit 15A | 0.0463561 |
| SF3B1 | splicing factor 3b, subunit 1, 155kDa | 0.0427947 |
| ANXA2 | annexin A2 | 0.0424079 |
| SLC2A1 | solute carrier family 2 (facilitated glucose transporter), member 1 | 0.0410176 |
| GFPT1 | glutamine--fructose-6-phosphate transaminase 1 | 0.0407503 |
| SYNE2 | spectrin repeat containing, nuclear envelope 2 | 0.0405945 |
| ANKRD11 | ankyrin repeat domain 11 | 0.040079 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | 0.0390354 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | 0.0387326 |
| SEC23A | Sec23 homolog A (S. cerevisiae) | 0.038111 |
| HUWE1 | HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase | 0.0378918 |
| SEMA4B | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B | 0.0378652 |
| CCNY | cyclin Y | 0.0366314 |
| ADAM9 | ADAM metallopeptidase domain 9 | 0.036486 |
| RIOK3 | RIO kinase 3 | 0.0359104 |
| OGA | O-GlcNAcase | 0.0351858 |
| RNF149 | ring finger protein 149 | 0.0340508 |
| HELZ | helicase with zinc finger | 0.0339792 |
| VIM | vimentin | 0.0339545 |
| DAPK1 | death-associated protein kinase 1 | 0.0335434 |
| RTN4 | reticulon 4 | 0.0335356 |
| CALR | calreticulin | 0.0326753 |
| NHS | Nance-Horan syndrome (congenital cataracts and dental anomalies) | 0.0321121 |
| CLMN | calmin (calponin-like, transmembrane) | 0.0319305 |
| TSC22D2 | TSC22 domain family, member 2 | 0.031602 |
| FAT1 | FAT atypical cadherin 1 | 0.0313589 |
| MUC4 | mucin 4, cell surface associated | 0.0309074 |
| ZFAND3 | zinc finger, AN1-type domain 3 | 0.0307378 |
| IGF1R | insulin-like growth factor 1 receptor | 0.0304177 |
| FGFR1 | fibroblast growth factor receptor 1 | 0.0300687 |
| LASP1 | LIM and SH3 protein 1 | 0.0300101 |
| SREBF2 | sterol regulatory element binding transcription factor 2 | 0.029942 |
| HLA-A | major histocompatibility complex, class I, A | 0.0298994 |
| EIF4H | eukaryotic translation initiation factor 4H | 0.0297794 |
| FUT8 | fucosyltransferase 8 (alpha (1,6) fucosyltransferase) | 0.0295579 |
| WIPF2 | WAS/WASL interacting protein family, member 2 | 0.0292563 |
| KMT2C | lysine (K)-specific methyltransferase 2C | 0.0287145 |
| FDPS | farnesyl diphosphate synthase | 0.0285628 |
| CYP51A1 | cytochrome P450, family 51, subfamily A, polypeptide 1 | 0.0283066 |
| KLF7 | Kruppel-like factor 7 (ubiquitous) | 0.0275723 |
| GRB10 | growth factor receptor-bound protein 10 | 0.02726 |
| HERC3 | HECT and RLD domain containing E3 ubiquitin protein ligase 3 | 0.0271864 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | 0.0264836 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 | 0.0264209 |
| PGK1 | phosphoglycerate kinase 1 | 0.026413 |
| GPBP1L1 | GC-rich promoter binding protein 1-like 1 | 0.0260663 |
| CD46 | CD46 molecule, complement regulatory protein | 0.0254398 |
| NCOR2 | nuclear receptor corepressor 2 | 0.0254256 |
| STC2 | stanniocalcin 2 | 0.0253627 |
| NAV2 | neuron navigator 2 | 0.0252465 |
| TINAGL1 | tubulointerstitial nephritis antigen-like 1 | 0.0252331 |
| TMBIM6 | transmembrane BAX inhibitor motif containing 6 | 0.0251113 |
| RALGPS2 | Ral GEF with PH domain and SH3 binding motif 2 | 0.0249214 |
| KDM5B | lysine (K)-specific demethylase 5B | 0.0246209 |
| LIFR | leukemia inhibitory factor receptor alpha | 0.0246 |
| FLNB | filamin B, beta | 0.0242352 |
| MSMO1 | methylsterol monooxygenase 1 | 0.0240689 |
| GCLC | glutamate-cysteine ligase, catalytic subunit | 0.0240581 |
| GNPDA1 | glucosamine-6-phosphate deaminase 1 | 0.0240547 |
| ELL2 | elongation factor, RNA polymerase II, 2 | 0.0233911 |
| DYNC1H1 | dynein, cytoplasmic 1, heavy chain 1 | 0.0230833 |
| WDR45B | WD repeat domain 45B | 0.0229079 |
| LINGO2 | leucine rich repeat and Ig domain containing 2 | 0.0228972 |
| ACSL4 | acyl-CoA synthetase long-chain family member 4 | 0.0226769 |
| FADS2 | fatty acid desaturase 2 | 0.0223025 |
| PDZD8 | PDZ domain containing 8 | 0.0222743 |
| RAP1B | RAP1B, member of RAS oncogene family | 0.0222478 |
| NEK6 | NIMA-related kinase 6 | 0.0220695 |
| CLIP4 | CAP-GLY domain containing linker protein family, member 4 | 0.0215809 |
| PRRC2A | proline-rich coiled-coil 2A | 0.0215388 |
| TRA2A | transformer 2 alpha homolog (Drosophila) | 0.0215284 |
| ZNF185 | zinc finger protein 185 (LIM domain) | 0.0215082 |
| LMNA | lamin A/C | 0.0214853 |
| CD47 | CD47 molecule | 0.0213148 |
| FBXO42 | F-box protein 42 | 0.0212446 |
| EHBP1 | EH domain binding protein 1 | 0.0211364 |
| RUNX1 | runt-related transcription factor 1 | 0.0209827 |
| B4GALT4 | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 | 0.0209215 |
| SEC24C | SEC24 family member C | 0.02091 |
| PTTG1IP | pituitary tumor-transforming 1 interacting protein | 0.0209089 |
| RNF213 | ring finger protein 213 | 0.0208883 |
| CEP250 | centrosomal protein 250kDa | 0.0206524 |
| RAB6A | RAB6A, member RAS oncogene family | 0.0204765 |
| LPP | LIM domain containing preferred translocation partner in lipoma | 0.0202717 |
| ARHGAP23 | Rho GTPase activating protein 23 | 0.0200944 |
| Symbol | Name | Standardized Value |
|---|---|---|
| PTMA | prothymosin, alpha | -0.176343 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.159995 |
| APOL1 | apolipoprotein L, 1 | -0.142713 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | -0.131772 |
| LAMC2 | laminin, gamma 2 | -0.127941 |
| ASPH | aspartate beta-hydroxylase | -0.121002 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.114324 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | -0.10121 |
| RPS2 | ribosomal protein S2 | -0.0909755 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.0869341 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide | -0.0769472 |
| MT2A | metallothionein 2A | -0.0728276 |
| B2M | beta-2-microglobulin | -0.0711859 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | -0.0711545 |
| RPL19 | ribosomal protein L19 | -0.0710292 |
| POTEF | POTE ankyrin domain family, member F | -0.0702185 |
| CDCP1 | CUB domain containing protein 1 | -0.069805 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0673801 |
| CP | ceruloplasmin (ferroxidase) | -0.0672843 |
| PLAUR | plasminogen activator, urokinase receptor | -0.0670289 |
| UBC | ubiquitin C | -0.0668603 |
| DSG2 | desmoglein 2 | -0.0666142 |
| MMP7 | matrix metallopeptidase 7 | -0.0665018 |
| CALM2 | calmodulin 2 (phosphorylase kinase, delta) | -0.066365 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.0657387 |
| RPS8 | ribosomal protein S8 | -0.0622069 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | -0.0602419 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0531101 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | -0.0521676 |
| RPS6 | ribosomal protein S6 | -0.0515819 |
| RPL37A | ribosomal protein L37a | -0.0507465 |
| TPM1 | tropomyosin 1 (alpha) | -0.0504247 |
| ARHGAP5 | Rho GTPase activating protein 5 | -0.0491479 |
| TFPI | tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) | -0.0483645 |
| PLAT | plasminogen activator, tissue | -0.0477067 |
| RPS29 | ribosomal protein S29 | -0.0474062 |
| IFI27 | interferon, alpha-inducible protein 27 | -0.0472696 |
| BRD2 | bromodomain containing 2 | -0.0469469 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | -0.0464394 |
| SPATS2L | spermatogenesis associated, serine-rich 2-like | -0.0464037 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | -0.0461164 |
| TPM4 | tropomyosin 4 | -0.0459718 |
| VMP1 | vacuole membrane protein 1 | -0.0459478 |
| ARHGAP26 | Rho GTPase activating protein 26 | -0.0456774 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.0446938 |
| IFIT3 | interferon-induced protein with tetratricopeptide repeats 3 | -0.0438525 |
| TMSB4X | thymosin beta 4, X-linked | -0.0429919 |
| MX2 | MX dynamin-like GTPase 2 | -0.0428143 |
| PTPN14 | protein tyrosine phosphatase, non-receptor type 14 | -0.0426601 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0424435 |
| CTNND1 | catenin (cadherin-associated protein), delta 1 | -0.041885 |
| LAMA4 | laminin, alpha 4 | -0.0412918 |
| STAT1 | signal transducer and activator of transcription 1, 91kDa | -0.041237 |
| PARP14 | poly (ADP-ribose) polymerase family, member 14 | -0.0410964 |
| HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | -0.0404326 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | -0.0403131 |
| KRT19 | keratin 19, type I | -0.0402858 |
| RAB10 | RAB10, member RAS oncogene family | -0.0396478 |
| LAMB1 | laminin, beta 1 | -0.0387711 |
| NUMB | numb homolog (Drosophila) | -0.0382286 |
| TMEM165 | transmembrane protein 165 | -0.0374058 |
| DSTN | destrin (actin depolymerizing factor) | -0.0364655 |
| LDHA | lactate dehydrogenase A | -0.0363772 |
| MYOF | myoferlin | -0.0363349 |
| S100A6 | S100 calcium binding protein A6 | -0.0359696 |
| SAMD9 | sterile alpha motif domain containing 9 | -0.0357197 |
| NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | -0.0353296 |
| PPARD | peroxisome proliferator-activated receptor delta | -0.0352823 |
| ITGA6 | integrin, alpha 6 | -0.0351318 |
| CSTB | cystatin B (stefin B) | -0.0347188 |
| LUC7L3 | LUC7-like 3 (S. cerevisiae) | -0.0346373 |
| PAPOLA | poly(A) polymerase alpha | -0.0344967 |
| RPS24 | ribosomal protein S24 | -0.0344806 |
| RPL36A | ribosomal protein L36a | -0.0343232 |
| ARIH1 | ariadne RBR E3 ubiquitin protein ligase 1 | -0.033761 |
| NABP1 | nucleic acid binding protein 1 | -0.0329993 |
| SYNRG | synergin, gamma | -0.0323698 |
| EPCAM | epithelial cell adhesion molecule | -0.0318793 |
| FAM107B | family with sequence similarity 107, member B | -0.0314608 |
| EREG | epiregulin | -0.0313999 |
| ALCAM | activated leukocyte cell adhesion molecule | -0.0313883 |
| ANKRD1 | ankyrin repeat domain 1 (cardiac muscle) | -0.031153 |
| MYO1E | myosin IE | -0.0310062 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | -0.0307004 |
| F11R | F11 receptor | -0.030646 |
| MACF1 | microtubule-actin crosslinking factor 1 | -0.0305006 |
| CFLAR | CASP8 and FADD-like apoptosis regulator | -0.0302188 |
| C15ORF48 | chromosome 15 open reading frame 48 | -0.0301542 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.030041 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 | -0.0298565 |
| PITPNC1 | phosphatidylinositol transfer protein, cytoplasmic 1 | -0.0298191 |
| S100A10 | S100 calcium binding protein A10 | -0.029812 |
| LIPH | lipase, member H | -0.0293918 |
| RPS27A | ribosomal protein S27a | -0.0293476 |
| LMO7 | LIM domain 7 | -0.0293301 |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 | -0.0292776 |
| KTN1 | kinectin 1 (kinesin receptor) | -0.0290566 |
| RPL9 | ribosomal protein L9 | -0.0290209 |
| SLC25A37 | solute carrier family 25 (mitochondrial iron transporter), member 37 | -0.02874 |
| SLC6A14 | solute carrier family 6 (amino acid transporter), member 14 | -0.0286469 |
