| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in H4 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Berbamine (dihydrochloride)_H4 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| COL6A3 | collagen, type VI, alpha 3 | 0.184853 |
| NDRG1 | N-myc downstream regulated 1 | 0.108576 |
| ANXA2 | annexin A2 | 0.104452 |
| EGFR | epidermal growth factor receptor | 0.10013 |
| HILPDA | hypoxia inducible lipid droplet-associated | 0.0866884 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0841944 |
| SDK1 | sidekick cell adhesion molecule 1 | 0.0771364 |
| DST | dystonin | 0.070898 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.0655164 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | 0.0629454 |
| TRA2A | transformer 2 alpha homolog (Drosophila) | 0.0612559 |
| GNPDA1 | glucosamine-6-phosphate deaminase 1 | 0.0572223 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.0563352 |
| PDIA3 | protein disulfide isomerase family A, member 3 | 0.0532409 |
| SF3B1 | splicing factor 3b, subunit 1, 155kDa | 0.0524302 |
| ZNF395 | zinc finger protein 395 | 0.0507421 |
| CLTC | clathrin, heavy chain (Hc) | 0.050354 |
| RBPJ | recombination signal binding protein for immunoglobulin kappa J region | 0.0444073 |
| HELZ | helicase with zinc finger | 0.0442386 |
| CENPF | centromere protein F, 350/400kDa | 0.0433507 |
| TFG | TRK-fused gene | 0.0423436 |
| FLNA | filamin A, alpha | 0.0421967 |
| SLC6A6 | solute carrier family 6 (neurotransmitter transporter), member 6 | 0.0419991 |
| FXR1 | fragile X mental retardation, autosomal homolog 1 | 0.0418803 |
| EIF4H | eukaryotic translation initiation factor 4H | 0.041693 |
| ALCAM | activated leukocyte cell adhesion molecule | 0.0414907 |
| HSPD1 | heat shock 60kDa protein 1 (chaperonin) | 0.0413087 |
| ZNF451 | zinc finger protein 451 | 0.0405479 |
| MYOF | myoferlin | 0.0395605 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | 0.0387651 |
| HM13 | histocompatibility (minor) 13 | 0.0384087 |
| DGKD | diacylglycerol kinase, delta 130kDa | 0.0381783 |
| GPC6 | glypican 6 | 0.0379552 |
| ADM | adrenomedullin | 0.0375652 |
| ETS1 | v-ets avian erythroblastosis virus E26 oncogene homolog 1 | 0.0368638 |
| MSN | moesin | 0.0367524 |
| AHR | aryl hydrocarbon receptor | 0.0356076 |
| FHIP1A | FHF complex subunit HOOK interacting protein 1A | 0.0350429 |
| DCLK2 | doublecortin-like kinase 2 | 0.0344658 |
| FAM13A | family with sequence similarity 13, member A | 0.034387 |
| USP3 | ubiquitin specific peptidase 3 | 0.0342024 |
| LCORL | ligand dependent nuclear receptor corepressor-like | 0.033537 |
| JMJD1C | jumonji domain containing 1C | 0.0333072 |
| RAB1A | RAB1A, member RAS oncogene family | 0.0333028 |
| LOXL2 | lysyl oxidase-like 2 | 0.033142 |
| FNIP1 | folliculin interacting protein 1 | 0.0327232 |
| MBNL1 | muscleblind-like splicing regulator 1 | 0.0323961 |
| FOSL1 | FOS-like antigen 1 | 0.0322554 |
| PPFIBP1 | PTPRF interacting protein, binding protein 1 (liprin beta 1) | 0.0321027 |
| RARS1 | arginyl-tRNA synthetase 1 | 0.0320506 |
| ANKRD17 | ankyrin repeat domain 17 | 0.0317325 |
| MON2 | MON2 homolog (S. cerevisiae) | 0.0316711 |
| SLC2A1 | solute carrier family 2 (facilitated glucose transporter), member 1 | 0.0316615 |
| LOC112694756 | uncharaterized LOC112694756 | 0.0316036 |
| UBA6 | ubiquitin-like modifier activating enzyme 6 | 0.0308348 |
| NBEAL1 | neurobeachin-like 1 | 0.0308275 |
| RNF220 | ring finger protein 220 | 0.0307794 |
| WDR45B | WD repeat domain 45B | 0.030525 |
| SPTY2D1 | SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae) | 0.0301483 |
| CADM1 | cell adhesion molecule 1 | 0.0301185 |
| SURF4 | surfeit 4 | 0.0299966 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | 0.0294859 |
| SLC25A6 | solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 | 0.0294722 |
| PPIA | peptidylprolyl isomerase A (cyclophilin A) | 0.0292481 |
| MIMS1 | mitochondrial inner membrane scaffold 1 | 0.028567 |
| ANXA5 | annexin A5 | 0.0284193 |
| IGF2BP3 | insulin-like growth factor 2 mRNA binding protein 3 | 0.028306 |
| RAB2A | RAB2A, member RAS oncogene family | 0.028163 |
| ABL2 | ABL proto-oncogene 2, non-receptor tyrosine kinase | 0.0281221 |
| TTC3 | tetratricopeptide repeat domain 3 | 0.0280038 |
| HJURP | Holliday junction recognition protein | 0.0279724 |
| SMC4 | structural maintenance of chromosomes 4 | 0.0273297 |
| TPI1 | triosephosphate isomerase 1 | 0.0271146 |
| PLIN2 | perilipin 2 | 0.027019 |
| SEC31A | SEC31 homolog A (S. cerevisiae) | 0.0269743 |
| GDNF | glial cell derived neurotrophic factor | 0.0269649 |
| AFF4 | AF4/FMR2 family, member 4 | 0.0267615 |
| SFXN1 | sideroflexin 1 | 0.0267328 |
| KMT2C | lysine (K)-specific methyltransferase 2C | 0.0266375 |
| PIK3C2A | phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha | 0.0265816 |
| AP2M1 | adaptor-related protein complex 2, mu 1 subunit | 0.0264965 |
| RLF | rearranged L-myc fusion | 0.0264943 |
| EIF2AK3 | eukaryotic translation initiation factor 2-alpha kinase 3 | 0.0264184 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | 0.0261335 |
| SRP54 | signal recognition particle 54kDa | 0.0260084 |
| GDI2 | GDP dissociation inhibitor 2 | 0.0257559 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0256841 |
| HERC3 | HECT and RLD domain containing E3 ubiquitin protein ligase 3 | 0.0254482 |
| SLC7A5 | solute carrier family 7 (amino acid transporter light chain, L system), member 5 | 0.0251901 |
| ARRDC3 | arrestin domain containing 3 | 0.024937 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0244295 |
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | 0.0243366 |
| NUP58 | nucleoporin 58 | 0.02424 |
| AKAP9 | A kinase (PRKA) anchor protein 9 | 0.0241789 |
| TMBIM6 | transmembrane BAX inhibitor motif containing 6 | 0.0241588 |
| ANLN | anillin, actin binding protein | 0.0240132 |
| SYAP1 | synapse associated protein 1 | 0.0239142 |
| PRELID2 | PRELI domain containing 2 | 0.0237928 |
| TRAM1 | translocation associated membrane protein 1 | 0.0237386 |
| SHB | Src homology 2 domain containing adaptor protein B | 0.0233794 |
| Symbol | Name | Standardized Value |
|---|---|---|
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.237913 |
| NALF1 | NALCN channel auxiliary factor 1 | -0.136378 |
| TMSB10 | thymosin beta 10 | -0.119855 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.104943 |
| MT2A | metallothionein 2A | -0.103946 |
| AHNAK | AHNAK nucleoprotein | -0.0976478 |
| UBC | ubiquitin C | -0.0969705 |
| ASPH | aspartate beta-hydroxylase | -0.0969261 |
| RPS27A | ribosomal protein S27a | -0.0880446 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | -0.0831682 |
| VIM | vimentin | -0.0774714 |
| HLA-B | major histocompatibility complex, class I, B | -0.0712119 |
| KYNU | kynureninase | -0.0679468 |
| STC1 | stanniocalcin 1 | -0.0639718 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0574038 |
| SLC7A11 | solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 | -0.0569273 |
| SDC4 | syndecan 4 | -0.0528127 |
| HIBADH | 3-hydroxyisobutyrate dehydrogenase | -0.0523802 |
| CANX | calnexin | -0.0513132 |
| ZC3HAV1 | zinc finger CCCH-type, antiviral 1 | -0.0503494 |
| ANKRD11 | ankyrin repeat domain 11 | -0.0496405 |
| NLGN1 | neuroligin 1 | -0.0491517 |
| NFE2L1 | nuclear factor, erythroid 2-like 1 | -0.0486228 |
| NPAS2 | neuronal PAS domain protein 2 | -0.0450598 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.0443786 |
| B2M | beta-2-microglobulin | -0.0436598 |
| APP | amyloid beta (A4) precursor protein | -0.04297 |
| ENO1 | enolase 1, (alpha) | -0.0425252 |
| TPM4 | tropomyosin 4 | -0.0405699 |
| NAV1 | neuron navigator 1 | -0.0403742 |
| IQCJ-SCHIP1 | IQCJ-SCHIP1 readthrough | -0.0375212 |
| P4HA2 | prolyl 4-hydroxylase, alpha polypeptide II | -0.0373882 |
| LRRC49 | leucine rich repeat containing 49 | -0.0372547 |
| ANTXR2 | anthrax toxin receptor 2 | -0.0370936 |
| PTMA | prothymosin, alpha | -0.0364453 |
| VEGFA | vascular endothelial growth factor A | -0.0351368 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.0348709 |
| MAST4 | microtubule associated serine/threonine kinase family member 4 | -0.0337676 |
| CYP1B1 | cytochrome P450, family 1, subfamily B, polypeptide 1 | -0.0336123 |
| IFI16 | interferon, gamma-inducible protein 16 | -0.0334351 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | -0.0332634 |
| BPTF | bromodomain PHD finger transcription factor | -0.0316878 |
| MCTP2 | multiple C2 domains, transmembrane 2 | -0.0315468 |
| PHF14 | PHD finger protein 14 | -0.0315343 |
| LDHA | lactate dehydrogenase A | -0.0312002 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 | -0.0309018 |
| CLMP | CXADR-like membrane protein | -0.0301564 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | -0.029944 |
| WWTR1 | WW domain containing transcription regulator 1 | -0.0296505 |
| RPL28 | ribosomal protein L28 | -0.029373 |
| CCPG1 | cell cycle progression 1 | -0.0292714 |
| ASNS | asparagine synthetase (glutamine-hydrolyzing) | -0.0292582 |
| USP34 | ubiquitin specific peptidase 34 | -0.0291314 |
| EIF4A1 | eukaryotic translation initiation factor 4A1 | -0.0291301 |
| RPL23 | ribosomal protein L23 | -0.0288948 |
| ZBTB20 | zinc finger and BTB domain containing 20 | -0.0287493 |
| PTPRK | protein tyrosine phosphatase, receptor type, K | -0.0287355 |
| NIBAN1 | niban apoptosis regulator 1 | -0.0284898 |
| EXOC4 | exocyst complex component 4 | -0.028479 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0276398 |
| MYL6 | myosin, light chain 6, alkali, smooth muscle and non-muscle | -0.0273952 |
| DOCK1 | dedicator of cytokinesis 1 | -0.0264235 |
| MCL1 | myeloid cell leukemia 1 | -0.0264198 |
| ARHGAP5 | Rho GTPase activating protein 5 | -0.0262711 |
| TSC22D1 | TSC22 domain family, member 1 | -0.0262221 |
| ZNF638 | zinc finger protein 638 | -0.0261026 |
| EIF4G3 | eukaryotic translation initiation factor 4 gamma, 3 | -0.0260585 |
| RABGAP1L | RAB GTPase activating protein 1-like | -0.0256593 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.0256578 |
| IFIT3 | interferon-induced protein with tetratricopeptide repeats 3 | -0.0256462 |
| EHBP1L1 | EH domain binding protein 1-like 1 | -0.0256183 |
| NFE2L2 | nuclear factor, erythroid 2-like 2 | -0.0254036 |
| JUN | jun proto-oncogene | -0.0252267 |
| RPL4 | ribosomal protein L4 | -0.0251993 |
| ARHGAP24 | Rho GTPase activating protein 24 | -0.0247964 |
| CALN1 | calneuron 1 | -0.0247399 |
| TNFRSF10B | tumor necrosis factor receptor superfamily, member 10b | -0.0247079 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | -0.0246868 |
| TNS3 | tensin 3 | -0.0245138 |
| SMURF2 | SMAD specific E3 ubiquitin protein ligase 2 | -0.0244689 |
| CDC42BPA | CDC42 binding protein kinase alpha (DMPK-like) | -0.024404 |
| MT1X | metallothionein 1X | -0.0242641 |
| ROBO2 | roundabout, axon guidance receptor, homolog 2 (Drosophila) | -0.0240128 |
| NAALADL2 | N-acetylated alpha-linked acidic dipeptidase-like 2 | -0.0239722 |
| RPL37A | ribosomal protein L37a | -0.0238818 |
| GRAMD1B | GRAM domain containing 1B | -0.0235638 |
| TIMP1 | TIMP metallopeptidase inhibitor 1 | -0.0234672 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 | -0.0232629 |
| WARS1 | tryptophanyl-tRNA synthetase 1 | -0.0230847 |
| TNNC1 | troponin C type 1 (slow) | -0.02308 |
| ERC2 | ELKS/RAB6-interacting/CAST family member 2 | -0.022793 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | -0.0226087 |
| SAMD9 | sterile alpha motif domain containing 9 | -0.0219895 |
| UBA2 | ubiquitin-like modifier activating enzyme 2 | -0.0217783 |
| TPTE | transmembrane phosphatase with tensin homology | -0.0217374 |
| YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon | -0.0215723 |
| CALU | calumenin | -0.0214587 |
| EHBP1 | EH domain binding protein 1 | -0.0214332 |
| SLFN5 | schlafen family member 5 | -0.0213664 |
| CD99 | CD99 molecule | -0.0213256 |
