| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in J82 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Berbamine (dihydrochloride)_J82 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| TRIO | trio Rho guanine nucleotide exchange factor | 0.11264 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0834353 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | 0.0824139 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0667761 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | 0.0553557 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | 0.0494592 |
| NAV2 | neuron navigator 2 | 0.0493409 |
| LDHA | lactate dehydrogenase A | 0.0408005 |
| UBA6 | ubiquitin-like modifier activating enzyme 6 | 0.0384606 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0358766 |
| SLC2A3 | solute carrier family 2 (facilitated glucose transporter), member 3 | 0.0309118 |
| TPM3 | tropomyosin 3 | 0.0307566 |
| DLG1 | discs, large homolog 1 (Drosophila) | 0.0305132 |
| MMP12 | matrix metallopeptidase 12 | 0.0295088 |
| MYH9 | myosin, heavy chain 9, non-muscle | 0.029426 |
| PLIN2 | perilipin 2 | 0.0289947 |
| PKM | pyruvate kinase, muscle | 0.0287715 |
| MYOF | myoferlin | 0.0280643 |
| DTNA | dystrobrevin, alpha | 0.0264153 |
| FN1 | fibronectin 1 | 0.0262504 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0257093 |
| RUNX1 | runt-related transcription factor 1 | 0.0255482 |
| MSN | moesin | 0.0253482 |
| VEGFA | vascular endothelial growth factor A | 0.0250005 |
| ATXN1 | ataxin 1 | 0.0247089 |
| ENO1 | enolase 1, (alpha) | 0.0246592 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | 0.024426 |
| RND3 | Rho family GTPase 3 | 0.0243832 |
| PLEC | plectin | 0.023183 |
| EIF4G1 | eukaryotic translation initiation factor 4 gamma, 1 | 0.02268 |
| KDM2A | lysine (K)-specific demethylase 2A | 0.0220503 |
| PDE10A | phosphodiesterase 10A | 0.0220175 |
| UAP1 | UDP-N-acetylglucosamine pyrophosphorylase 1 | 0.0218244 |
| SPTBN1 | spectrin, beta, non-erythrocytic 1 | 0.0217327 |
| AFAP1 | actin filament associated protein 1 | 0.0213731 |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa | 0.0212678 |
| DST | dystonin | 0.0210182 |
| ASPH | aspartate beta-hydroxylase | 0.0209853 |
| EGFR | epidermal growth factor receptor | 0.0205474 |
| PCBP2 | poly(rC) binding protein 2 | 0.0200772 |
| HPS3 | Hermansky-Pudlak syndrome 3 | 0.0195453 |
| MCL1 | myeloid cell leukemia 1 | 0.0193466 |
| FRMD6 | FERM domain containing 6 | 0.0192193 |
| YEATS2 | YEATS domain containing 2 | 0.0189274 |
| SOD2 | superoxide dismutase 2, mitochondrial | 0.0188612 |
| PPP1R15A | protein phosphatase 1, regulatory subunit 15A | 0.0187981 |
| POTEF | POTE ankyrin domain family, member F | 0.0186943 |
| EIF4G2 | eukaryotic translation initiation factor 4 gamma, 2 | 0.0186539 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | 0.0186236 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | 0.018592 |
| STC2 | stanniocalcin 2 | 0.0184021 |
| ANXA1 | annexin A1 | 0.0184011 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | 0.0183388 |
| SPOCK1 | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 | 0.018284 |
| TNIK | TRAF2 and NCK interacting kinase | 0.018197 |
| RPL3 | ribosomal protein L3 | 0.0181098 |
| KMT2E | lysine (K)-specific methyltransferase 2E | 0.0180429 |
| PFKP | phosphofructokinase, platelet | 0.0180099 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 0.0179965 |
| ANO6 | anoctamin 6 | 0.0174928 |
| ADAM9 | ADAM metallopeptidase domain 9 | 0.0173935 |
| LIMCH1 | LIM and calponin homology domains 1 | 0.0171777 |
| SQSTM1 | sequestosome 1 | 0.0171175 |
| HNRNPA2B1 | heterogeneous nuclear ribonucleoprotein A2/B1 | 0.0163528 |
| CRIM1 | cysteine rich transmembrane BMP regulator 1 (chordin-like) | 0.0163121 |
| ZEB2 | zinc finger E-box binding homeobox 2 | 0.0162969 |
| PDIA3 | protein disulfide isomerase family A, member 3 | 0.0162737 |
| CENPF | centromere protein F, 350/400kDa | 0.0162402 |
| SEMA5A | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A | 0.0161247 |
| MIDEAS | mitotic deacetylase associated SANT domain protein | 0.0160834 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | 0.0156948 |
| ZNF292 | zinc finger protein 292 | 0.0156646 |
| UACA | uveal autoantigen with coiled-coil domains and ankyrin repeats | 0.0155014 |
| TOX | thymocyte selection-associated high mobility group box | 0.0154947 |
| AFF1 | AF4/FMR2 family, member 1 | 0.0153313 |
| BCAT1 | branched chain amino-acid transaminase 1, cytosolic | 0.0151282 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | 0.0150176 |
| PTPRM | protein tyrosine phosphatase, receptor type, M | 0.0150172 |
| SDK1 | sidekick cell adhesion molecule 1 | 0.0149786 |
| KLF7 | Kruppel-like factor 7 (ubiquitous) | 0.0148418 |
| B2M | beta-2-microglobulin | 0.0147961 |
| ZHX2 | zinc fingers and homeoboxes 2 | 0.0147127 |
| FNIP1 | folliculin interacting protein 1 | 0.0146677 |
| GALNT18 | polypeptide N-acetylgalactosaminyltransferase 18 | 0.0146607 |
| KMT2C | lysine (K)-specific methyltransferase 2C | 0.014593 |
| NDRG1 | N-myc downstream regulated 1 | 0.0145553 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0145138 |
| YBX1 | Y box binding protein 1 | 0.0144979 |
| ARRDC3 | arrestin domain containing 3 | 0.0144916 |
| RAI1 | retinoic acid induced 1 | 0.0143528 |
| MYO1B | myosin IB | 0.0143316 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 | 0.0142042 |
| KDM6A | lysine (K)-specific demethylase 6A | 0.0142 |
| SHB | Src homology 2 domain containing adaptor protein B | 0.0140081 |
| HYOU1 | hypoxia up-regulated 1 | 0.0139983 |
| KTN1 | kinectin 1 (kinesin receptor) | 0.0138506 |
| PIAS2 | protein inhibitor of activated STAT, 2 | 0.0138274 |
| FHIT | fragile histidine triad | 0.0137381 |
| PLK2 | polo-like kinase 2 | 0.0137124 |
| DYNC1H1 | dynein, cytoplasmic 1, heavy chain 1 | 0.0135892 |
| Symbol | Name | Standardized Value |
|---|---|---|
| MT2A | metallothionein 2A | -0.176527 |
| HLA-B | major histocompatibility complex, class I, B | -0.167295 |
| MT1X | metallothionein 1X | -0.115445 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | -0.114324 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.0946808 |
| FTL | ferritin, light polypeptide | -0.0882043 |
| EXT1 | exostosin glycosyltransferase 1 | -0.0820745 |
| TMSB10 | thymosin beta 10 | -0.0643037 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0642938 |
| CD44 | CD44 molecule (Indian blood group) | -0.0638501 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0537525 |
| FTH1 | ferritin, heavy polypeptide 1 | -0.0515295 |
| HLA-C | major histocompatibility complex, class I, C | -0.0486733 |
| PHLDB2 | pleckstrin homology-like domain, family B, member 2 | -0.0466359 |
| SMURF2 | SMAD specific E3 ubiquitin protein ligase 2 | -0.0463186 |
| RPL35A | ribosomal protein L35a | -0.0444671 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate | -0.0431868 |
| GLIS3 | GLIS family zinc finger 3 | -0.0412807 |
| CAVIN1 | caveolae associated protein 1 | -0.040915 |
| DEK | DEK proto-oncogene | -0.0396542 |
| PTMA | prothymosin, alpha | -0.0370984 |
| BASP1 | brain abundant, membrane attached signal protein 1 | -0.0352964 |
| OSMR | oncostatin M receptor | -0.0348264 |
| RPLP2 | ribosomal protein, large, P2 | -0.0329308 |
| ACTG1 | actin gamma 1 | -0.0320287 |
| KPNB1 | karyopherin (importin) beta 1 | -0.0312362 |
| GNAS | GNAS complex locus | -0.030847 |
| LOC112694756 | uncharaterized LOC112694756 | -0.0294193 |
| RPL37 | ribosomal protein L37 | -0.0270162 |
| IFITM3 | interferon induced transmembrane protein 3 | -0.0268091 |
| WSB1 | WD repeat and SOCS box containing 1 | -0.0267123 |
| S100A10 | S100 calcium binding protein A10 | -0.0266736 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | -0.0258584 |
| STAU1 | staufen double-stranded RNA binding protein 1 | -0.0258253 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0255684 |
| GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | -0.0252824 |
| HMGB1 | high mobility group box 1 | -0.0241296 |
| NAMPT | nicotinamide phosphoribosyltransferase | -0.0230931 |
| YWHAB | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta | -0.0229886 |
| PGK1 | phosphoglycerate kinase 1 | -0.0228859 |
| RAB2A | RAB2A, member RAS oncogene family | -0.0224476 |
| EIF4A1 | eukaryotic translation initiation factor 4A1 | -0.0220773 |
| RPS6 | ribosomal protein S6 | -0.0214626 |
| RPL12 | ribosomal protein L12 | -0.0212533 |
| MYL12B | myosin, light chain 12B, regulatory | -0.0211669 |
| RPS19 | ribosomal protein S19 | -0.020877 |
| HLA-A | major histocompatibility complex, class I, A | -0.0208385 |
| TUBB | tubulin, beta class I | -0.0205777 |
| ARFGEF2 | ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) | -0.0201915 |
| CTSD | cathepsin D | -0.0200188 |
| RPS21 | ribosomal protein S21 | -0.0196533 |
| EIF1 | eukaryotic translation initiation factor 1 | -0.0196499 |
| SEC61A1 | Sec61 alpha 1 subunit (S. cerevisiae) | -0.0195259 |
| PRRC2B | proline-rich coiled-coil 2B | -0.0194564 |
| RRBP1 | ribosome binding protein 1 | -0.019415 |
| RPL34 | ribosomal protein L34 | -0.0193427 |
| KHDRBS1 | KH domain containing, RNA binding, signal transduction associated 1 | -0.0192676 |
| RBM25 | RNA binding motif protein 25 | -0.019167 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0190348 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | -0.0190299 |
| RALY | RALY heterogeneous nuclear ribonucleoprotein | -0.0190168 |
| RPL26 | ribosomal protein L26 | -0.0188132 |
| CELF1 | CUGBP, Elav-like family member 1 | -0.0188029 |
| RPLP1 | ribosomal protein, large, P1 | -0.0188011 |
| PRRC2C | proline-rich coiled-coil 2C | -0.0187843 |
| F3 | coagulation factor III (thromboplastin, tissue factor) | -0.0187124 |
| RAD21 | RAD21 homolog (S. pombe) | -0.0185736 |
| SF3B2 | splicing factor 3b, subunit 2, 145kDa | -0.0185722 |
| ERBIN | erbb2 interacting protein | -0.018405 |
| RPL31 | ribosomal protein L31 | -0.0183551 |
| GOLGA4 | golgin A4 | -0.0181233 |
| ANKRD10 | ankyrin repeat domain 10 | -0.0178609 |
| CD59 | CD59 molecule, complement regulatory protein | -0.0175467 |
| RAP1B | RAP1B, member of RAS oncogene family | -0.0173803 |
| MARCHF6 | membrane associated ring-CH-type finger 6 | -0.0172297 |
| LOX | lysyl oxidase | -0.0168804 |
| TMEM263 | transmembrane protein 263 | -0.0168401 |
| ANKLE2 | ankyrin repeat and LEM domain containing 2 | -0.0168058 |
| RPS13 | ribosomal protein S13 | -0.0167733 |
| GNAI2 | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 | -0.0167197 |
| TAF1D | TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa | -0.016678 |
| ARF1 | ADP-ribosylation factor 1 | -0.0166741 |
| DDX5 | DEAD (Asp-Glu-Ala-Asp) box helicase 5 | -0.016631 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | -0.0166203 |
| RPL35 | ribosomal protein L35 | -0.0164455 |
| UGGT2 | UDP-glucose glycoprotein glucosyltransferase 2 | -0.0162852 |
| S100A6 | S100 calcium binding protein A6 | -0.0162518 |
| IER3 | immediate early response 3 | -0.016224 |
| EIF5B | eukaryotic translation initiation factor 5B | -0.0161463 |
| AHNAK | AHNAK nucleoprotein | -0.0160321 |
| SERF2 | small EDRK-rich factor 2 | -0.0158827 |
| PTPRF | protein tyrosine phosphatase, receptor type, F | -0.0158689 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.0157756 |
| VDAC1 | voltage-dependent anion channel 1 | -0.0157298 |
| EIF4G3 | eukaryotic translation initiation factor 4 gamma, 3 | -0.0157024 |
| NALF1 | NALCN channel auxiliary factor 1 | -0.0156334 |
| RAB7A | RAB7A, member RAS oncogene family | -0.0154655 |
| RPS24 | ribosomal protein S24 | -0.0154433 |
| TRIM56 | tripartite motif containing 56 | -0.0150819 |
| SMC5 | structural maintenance of chromosomes 5 | -0.0149886 |
