| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in NCI-H1792 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Berbamine (dihydrochloride)_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| NAV2 | neuron navigator 2 | 0.0902292 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0893738 |
| GRB10 | growth factor receptor-bound protein 10 | 0.0808959 |
| EIF4H | eukaryotic translation initiation factor 4H | 0.0630295 |
| SMAD3 | SMAD family member 3 | 0.0626407 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | 0.0606619 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | 0.0530515 |
| PTPN12 | protein tyrosine phosphatase, non-receptor type 12 | 0.0515616 |
| NAMPT | nicotinamide phosphoribosyltransferase | 0.0478128 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | 0.0465463 |
| DOCK5 | dedicator of cytokinesis 5 | 0.0459944 |
| SERPINE2 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 0.0451327 |
| SLC6A6 | solute carrier family 6 (neurotransmitter transporter), member 6 | 0.0440314 |
| FLNB | filamin B, beta | 0.0437388 |
| VEGFA | vascular endothelial growth factor A | 0.0421318 |
| CALU | calumenin | 0.041202 |
| NBAS | neuroblastoma amplified sequence | 0.0410564 |
| KLF7 | Kruppel-like factor 7 (ubiquitous) | 0.0406674 |
| SRGAP1 | SLIT-ROBO Rho GTPase activating protein 1 | 0.0405354 |
| SEC31A | SEC31 homolog A (S. cerevisiae) | 0.0404355 |
| AKAP12 | A kinase (PRKA) anchor protein 12 | 0.0378787 |
| PCBP2 | poly(rC) binding protein 2 | 0.0378721 |
| TNIP1 | TNFAIP3 interacting protein 1 | 0.0375555 |
| AKAP13 | A kinase (PRKA) anchor protein 13 | 0.0374217 |
| HNRNPA1 | heterogeneous nuclear ribonucleoprotein A1 | 0.0374026 |
| OPTN | optineurin | 0.0372968 |
| BASP1 | brain abundant, membrane attached signal protein 1 | 0.0365654 |
| CD44 | CD44 molecule (Indian blood group) | 0.0363912 |
| SEC23A | Sec23 homolog A (S. cerevisiae) | 0.0362908 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0361725 |
| RUNX2 | runt-related transcription factor 2 | 0.0359267 |
| MAML2 | mastermind-like 2 (Drosophila) | 0.0350851 |
| MYH9 | myosin, heavy chain 9, non-muscle | 0.0347635 |
| NDRG1 | N-myc downstream regulated 1 | 0.0345168 |
| TTC3 | tetratricopeptide repeat domain 3 | 0.0339731 |
| ABCA1 | ATP-binding cassette, sub-family A (ABC1), member 1 | 0.0337439 |
| YEATS2 | YEATS domain containing 2 | 0.0326624 |
| SF3B1 | splicing factor 3b, subunit 1, 155kDa | 0.0322517 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | 0.0315605 |
| GOLGA4 | golgin A4 | 0.0314732 |
| DOCK4 | dedicator of cytokinesis 4 | 0.0312554 |
| ASXL1 | additional sex combs like transcriptional regulator 1 | 0.0306094 |
| ADD3 | adducin 3 (gamma) | 0.0302869 |
| MSN | moesin | 0.0291531 |
| ZNRF1 | zinc and ring finger 1, E3 ubiquitin protein ligase | 0.0289695 |
| EEF2 | eukaryotic translation elongation factor 2 | 0.0285331 |
| PTEN | phosphatase and tensin homolog | 0.0279993 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | 0.027807 |
| ZEB2 | zinc finger E-box binding homeobox 2 | 0.0274391 |
| HUWE1 | HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase | 0.0272523 |
| FHIP1A | FHF complex subunit HOOK interacting protein 1A | 0.027152 |
| MAP3K5 | mitogen-activated protein kinase kinase kinase 5 | 0.0269924 |
| LUZP1 | leucine zipper protein 1 | 0.0267054 |
| AKAP9 | A kinase (PRKA) anchor protein 9 | 0.0265995 |
| TFG | TRK-fused gene | 0.0264221 |
| EIF3B | eukaryotic translation initiation factor 3, subunit B | 0.026405 |
| HECTD1 | HECT domain containing E3 ubiquitin protein ligase 1 | 0.0260632 |
| CCNY | cyclin Y | 0.0259276 |
| CD109 | CD109 molecule | 0.0256929 |
| DPYSL3 | dihydropyrimidinase-like 3 | 0.0255568 |
| ZMIZ1 | zinc finger, MIZ-type containing 1 | 0.0255069 |
| MMAB | methylmalonic aciduria (cobalamin deficiency) cblB type | 0.0253073 |
| STRN3 | striatin, calmodulin binding protein 3 | 0.025257 |
| SHB | Src homology 2 domain containing adaptor protein B | 0.0251761 |
| RAB10 | RAB10, member RAS oncogene family | 0.0250169 |
| SNX9 | sorting nexin 9 | 0.0249827 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.0246221 |
| SAMD4A | sterile alpha motif domain containing 4A | 0.0244463 |
| CEP250 | centrosomal protein 250kDa | 0.0242845 |
| LRRC49 | leucine rich repeat containing 49 | 0.0239706 |
| GFPT1 | glutamine--fructose-6-phosphate transaminase 1 | 0.0235306 |
| CLTC | clathrin, heavy chain (Hc) | 0.0235015 |
| FAM120A | family with sequence similarity 120A | 0.0234202 |
| ANXA2 | annexin A2 | 0.0233865 |
| KANSL3 | KAT8 regulatory NSL complex subunit 3 | 0.0231867 |
| NPC1 | Niemann-Pick disease, type C1 | 0.0227942 |
| DMXL2 | Dmx-like 2 | 0.022698 |
| PCNX1 | pecanex 1 | 0.0226458 |
| MRPS6 | mitochondrial ribosomal protein S6 | 0.0220557 |
| ANXA5 | annexin A5 | 0.021918 |
| FNIP1 | folliculin interacting protein 1 | 0.0219174 |
| PICALM | phosphatidylinositol binding clathrin assembly protein | 0.0218488 |
| ZNF292 | zinc finger protein 292 | 0.0217432 |
| ARID3B | AT rich interactive domain 3B (BRIGHT-like) | 0.0217236 |
| MON2 | MON2 homolog (S. cerevisiae) | 0.0216582 |
| MAP4K4 | mitogen-activated protein kinase kinase kinase kinase 4 | 0.021557 |
| BBX | bobby sox homolog (Drosophila) | 0.0214928 |
| ATP13A3 | ATPase type 13A3 | 0.021461 |
| PPP1R12B | protein phosphatase 1, regulatory subunit 12B | 0.0212652 |
| GDI2 | GDP dissociation inhibitor 2 | 0.0211096 |
| SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin), member 9 | 0.0211086 |
| PRRC2B | proline-rich coiled-coil 2B | 0.021076 |
| AOPEP | aminopeptidase O (putative) | 0.0210031 |
| BACE2 | beta-site APP-cleaving enzyme 2 | 0.021002 |
| CNOT12 | CCR4-NOT transcription complex subunit 12 | 0.0205452 |
| ITGB1 | integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) | 0.0204571 |
| MINDY2 | MINDY lysine 48 deubiquitinase 2 | 0.0203994 |
| GOLPH3 | golgi phosphoprotein 3 (coat-protein) | 0.0202043 |
| SIPA1L1 | signal-induced proliferation-associated 1 like 1 | 0.0201028 |
| ANKRD36 | ankyrin repeat domain 36 | 0.0200474 |
| Symbol | Name | Standardized Value |
|---|---|---|
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.295989 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.164458 |
| SDK1 | sidekick cell adhesion molecule 1 | -0.132192 |
| HMGA2 | high mobility group AT-hook 2 | -0.109529 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0983341 |
| FTL | ferritin, light polypeptide | -0.0900392 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | -0.0747057 |
| TMSB10 | thymosin beta 10 | -0.0731691 |
| STC1 | stanniocalcin 1 | -0.0663165 |
| FN1 | fibronectin 1 | -0.0660492 |
| CXCL8 | chemokine (C-X-C motif) ligand 8 | -0.0644158 |
| MT2A | metallothionein 2A | -0.0638732 |
| LOX | lysyl oxidase | -0.059892 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | -0.0595661 |
| APBB2 | amyloid beta (A4) precursor protein-binding, family B, member 2 | -0.0567748 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | -0.0500059 |
| ITPR1 | inositol 1,4,5-trisphosphate receptor, type 1 | -0.049209 |
| ZNF804A | zinc finger protein 804A | -0.0487026 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | -0.0486711 |
| AGAP1 | ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 | -0.0480766 |
| PSD3 | pleckstrin and Sec7 domain containing 3 | -0.0459547 |
| IER3 | immediate early response 3 | -0.0459454 |
| SP100 | SP100 nuclear antigen | -0.0445209 |
| CAMK1D | calcium/calmodulin-dependent protein kinase ID | -0.0444876 |
| SAMD9 | sterile alpha motif domain containing 9 | -0.0441921 |
| INTS6 | integrator complex subunit 6 | -0.0429629 |
| FAM20C | family with sequence similarity 20, member C | -0.0426456 |
| LMAN1 | lectin, mannose-binding, 1 | -0.0418112 |
| VIM | vimentin | -0.0409469 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | -0.0405913 |
| RPLP1 | ribosomal protein, large, P1 | -0.0399773 |
| PARP14 | poly (ADP-ribose) polymerase family, member 14 | -0.0382892 |
| CDH13 | cadherin 13 | -0.0382137 |
| PTMA | prothymosin, alpha | -0.0380649 |
| UBE2E2 | ubiquitin-conjugating enzyme E2E 2 | -0.0374383 |
| CA12 | carbonic anhydrase XII | -0.0373994 |
| CANX | calnexin | -0.0369649 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | -0.0365706 |
| GLCCI1 | glucocorticoid induced 1 | -0.0365275 |
| AHNAK | AHNAK nucleoprotein | -0.0363694 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0358953 |
| PDIA3 | protein disulfide isomerase family A, member 3 | -0.0352081 |
| LRMDA | leucine rich melanocyte differentiation associated | -0.0351383 |
| STAT1 | signal transducer and activator of transcription 1, 91kDa | -0.0336581 |
| NAP1L1 | nucleosome assembly protein 1-like 1 | -0.0334217 |
| ERN1 | endoplasmic reticulum to nucleus signaling 1 | -0.0333751 |
| RAB1A | RAB1A, member RAS oncogene family | -0.0326912 |
| NLK | nemo-like kinase | -0.0324409 |
| PHLDA1 | pleckstrin homology-like domain, family A, member 1 | -0.0323067 |
| MAP1B | microtubule-associated protein 1B | -0.0319088 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | -0.0316764 |
| ATG7 | autophagy related 7 | -0.0314944 |
| MTSS1 | metastasis suppressor 1 | -0.0314843 |
| MECOM | MDS1 and EVI1 complex locus | -0.0314781 |
| MARCKS | myristoylated alanine-rich protein kinase C substrate | -0.0311564 |
| UBR5 | ubiquitin protein ligase E3 component n-recognin 5 | -0.0311324 |
| ARIH1 | ariadne RBR E3 ubiquitin protein ligase 1 | -0.0307498 |
| C15ORF48 | chromosome 15 open reading frame 48 | -0.0305335 |
| PAPPA | pregnancy-associated plasma protein A, pappalysin 1 | -0.030401 |
| BTG1 | B-cell translocation gene 1, anti-proliferative | -0.0301231 |
| AADAC | arylacetamide deacetylase | -0.0297984 |
| CDK14 | cyclin-dependent kinase 14 | -0.0294245 |
| PARD3 | par-3 family cell polarity regulator | -0.0293385 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.0292572 |
| CFAP20DC | CFAP20 domain containing | -0.0292367 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | -0.0291897 |
| STXBP5 | syntaxin binding protein 5 (tomosyn) | -0.0290058 |
| NAV1 | neuron navigator 1 | -0.0286892 |
| TAS2R14 | taste receptor, type 2, member 14 | -0.0286731 |
| GLIS3 | GLIS family zinc finger 3 | -0.0286051 |
| MX2 | MX dynamin-like GTPase 2 | -0.0284624 |
| TGFB1 | transforming growth factor, beta 1 | -0.0284473 |
| SUPT3H | suppressor of Ty 3 homolog (S. cerevisiae) | -0.0280621 |
| UBC | ubiquitin C | -0.0277746 |
| CUX1 | cut-like homeobox 1 | -0.0277473 |
| PLCB1 | phospholipase C, beta 1 (phosphoinositide-specific) | -0.0276069 |
| NFAT5 | nuclear factor of activated T-cells 5, tonicity-responsive | -0.0276019 |
| MAGI2 | membrane associated guanylate kinase, WW and PDZ domain containing 2 | -0.0275927 |
| TFPI2 | tissue factor pathway inhibitor 2 | -0.0274175 |
| GFPT2 | glutamine-fructose-6-phosphate transaminase 2 | -0.0272996 |
| H1-0 | H1.0 linker histone | -0.0272607 |
| ZBTB20 | zinc finger and BTB domain containing 20 | -0.0272012 |
| COL7A1 | collagen, type VII, alpha 1 | -0.0269302 |
| HDAC4 | histone deacetylase 4 | -0.026871 |
| RPS24 | ribosomal protein S24 | -0.0262529 |
| RPS16 | ribosomal protein S16 | -0.0262441 |
| TANC2 | tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 | -0.0257757 |
| EFCAB13 | EF-hand calcium binding domain 13 | -0.0257333 |
| TRIO | trio Rho guanine nucleotide exchange factor | -0.0257239 |
| NRG1 | neuregulin 1 | -0.0255503 |
| PLSCR1 | phospholipid scramblase 1 | -0.025362 |
| GALNT18 | polypeptide N-acetylgalactosaminyltransferase 18 | -0.0251909 |
| RPS25 | ribosomal protein S25 | -0.0250515 |
| S100A10 | S100 calcium binding protein A10 | -0.0246963 |
| TNNC1 | troponin C type 1 (slow) | -0.0246614 |
| VCL | vinculin | -0.0245936 |
| RPS6 | ribosomal protein S6 | -0.0244212 |
| PGK1 | phosphoglycerate kinase 1 | -0.0242688 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | -0.0241987 |
| RPL32 | ribosomal protein L32 | -0.0238248 |
