| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine (dihydrochloride) perturbation in Panc 03.27 cell line (Tahoe Therapeutics) |
| Similar Terms | |
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200 genes differentially expressed following the Berbamine (dihydrochloride)_Panc 03.27 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | 0.145612 |
| NDRG1 | N-myc downstream regulated 1 | 0.104147 |
| IGFBP3 | insulin-like growth factor binding protein 3 | 0.0893646 |
| DDIT4 | DNA-damage-inducible transcript 4 | 0.08229 |
| PLEC | plectin | 0.0816887 |
| FUT8 | fucosyltransferase 8 (alpha (1,6) fucosyltransferase) | 0.0815778 |
| GNPDA1 | glucosamine-6-phosphate deaminase 1 | 0.0762804 |
| EZR | ezrin | 0.0731742 |
| EMP1 | epithelial membrane protein 1 | 0.0728301 |
| NPEPPS | aminopeptidase puromycin sensitive | 0.0712857 |
| ANXA2 | annexin A2 | 0.069138 |
| ERO1A | endoplasmic reticulum oxidoreductase 1 alpha | 0.0678248 |
| PTMA | prothymosin, alpha | 0.0615301 |
| LOC102724023 | ES1 protein homolog, mitochondrial | 0.0594355 |
| TPM4 | tropomyosin 4 | 0.0586516 |
| LDHA | lactate dehydrogenase A | 0.0581783 |
| CLIP4 | CAP-GLY domain containing linker protein family, member 4 | 0.057258 |
| TMSB4X | thymosin beta 4, X-linked | 0.0560879 |
| TSC22D2 | TSC22 domain family, member 2 | 0.055055 |
| TMEM123 | transmembrane protein 123 | 0.0514229 |
| FN1 | fibronectin 1 | 0.0507013 |
| JUP | junction plakoglobin | 0.0506532 |
| SVIL | supervillin | 0.0492943 |
| LMO7 | LIM domain 7 | 0.0484789 |
| TPI1 | triosephosphate isomerase 1 | 0.048259 |
| PLAU | plasminogen activator, urokinase | 0.0465562 |
| ERRFI1 | ERBB receptor feedback inhibitor 1 | 0.04623 |
| UGCG | UDP-glucose ceramide glucosyltransferase | 0.0458314 |
| MAP3K13 | mitogen-activated protein kinase kinase kinase 13 | 0.0444443 |
| LAMB3 | laminin, beta 3 | 0.0436626 |
| IGF2BP2 | insulin-like growth factor 2 mRNA binding protein 2 | 0.0429086 |
| PTPRJ | protein tyrosine phosphatase, receptor type, J | 0.0425727 |
| RPL35A | ribosomal protein L35a | 0.0425227 |
| PLOD2 | procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 | 0.0414595 |
| KRT19 | keratin 19, type I | 0.0404194 |
| KDM2A | lysine (K)-specific demethylase 2A | 0.0403231 |
| DAPK1 | death-associated protein kinase 1 | 0.0401875 |
| KDM3A | lysine (K)-specific demethylase 3A | 0.0395788 |
| PGK1 | phosphoglycerate kinase 1 | 0.0393975 |
| SEMA4B | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B | 0.0387792 |
| HMGA1 | high mobility group AT-hook 1 | 0.0384392 |
| RIOK3 | RIO kinase 3 | 0.0379303 |
| INPP4B | inositol polyphosphate-4-phosphatase, type II, 105kDa | 0.0376829 |
| MBOAT2 | membrane bound O-acyltransferase domain containing 2 | 0.0370943 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0367877 |
| DLG1 | discs, large homolog 1 (Drosophila) | 0.036773 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.0365921 |
| WDR45B | WD repeat domain 45B | 0.0361775 |
| MAML2 | mastermind-like 2 (Drosophila) | 0.0357508 |
| SLC2A1 | solute carrier family 2 (facilitated glucose transporter), member 1 | 0.0350298 |
| NIBAN2 | niban apoptosis regulator 2 | 0.034975 |
| KDM5B | lysine (K)-specific demethylase 5B | 0.0347631 |
| BACE2 | beta-site APP-cleaving enzyme 2 | 0.0339775 |
| CD47 | CD47 molecule | 0.033912 |
| USP3 | ubiquitin specific peptidase 3 | 0.0337446 |
| MAP4K4 | mitogen-activated protein kinase kinase kinase kinase 4 | 0.0336321 |
| P4HA1 | prolyl 4-hydroxylase, alpha polypeptide I | 0.0335136 |
| UBE2H | ubiquitin-conjugating enzyme E2H | 0.0326638 |
| HNRNPH1 | heterogeneous nuclear ribonucleoprotein H1 (H) | 0.0322571 |
| CLMN | calmin (calponin-like, transmembrane) | 0.0322245 |
| F3 | coagulation factor III (thromboplastin, tissue factor) | 0.0319662 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0318084 |
| AKT3 | v-akt murine thymoma viral oncogene homolog 3 | 0.0317611 |
| SERPINB1 | serpin peptidase inhibitor, clade B (ovalbumin), member 1 | 0.0306838 |
| CD2AP | CD2-associated protein | 0.0306391 |
| ITGB4 | integrin, beta 4 | 0.030539 |
| SLMAP | sarcolemma associated protein | 0.0304103 |
| RBPJ | recombination signal binding protein for immunoglobulin kappa J region | 0.0303307 |
| WFDC2 | WAP four-disulfide core domain 2 | 0.0297172 |
| DYRK1A | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A | 0.0296896 |
| LGALS3 | lectin, galactoside-binding, soluble, 3 | 0.0296588 |
| ARHGEF3 | Rho guanine nucleotide exchange factor (GEF) 3 | 0.029404 |
| RALGPS2 | Ral GEF with PH domain and SH3 binding motif 2 | 0.0293872 |
| MEF2A | myocyte enhancer factor 2A | 0.0293479 |
| MORF4L2 | mortality factor 4 like 2 | 0.0289587 |
| PKM | pyruvate kinase, muscle | 0.0287549 |
| FMNL2 | formin-like 2 | 0.028493 |
| GNAS | GNAS complex locus | 0.0284617 |
| GRID1 | glutamate receptor, ionotropic, delta 1 | 0.0282903 |
| RLF | rearranged L-myc fusion | 0.0274745 |
| HSP90AB1 | heat shock protein 90kDa alpha (cytosolic), class B member 1 | 0.0271288 |
| RAB11FIP1 | RAB11 family interacting protein 1 (class I) | 0.0270539 |
| ASS1 | argininosuccinate synthase 1 | 0.0266507 |
| HBP1 | HMG-box transcription factor 1 | 0.0265814 |
| POLR2A | polymerase (RNA) II (DNA directed) polypeptide A, 220kDa | 0.0265633 |
| SKAP2 | src kinase associated phosphoprotein 2 | 0.0264709 |
| SOX4 | SRY (sex determining region Y)-box 4 | 0.0261577 |
| RYK | receptor-like tyrosine kinase | 0.026071 |
| ARF4 | ADP-ribosylation factor 4 | 0.0259132 |
| TMOD3 | tropomodulin 3 (ubiquitous) | 0.0256655 |
| LOC112694756 | uncharaterized LOC112694756 | 0.0256481 |
| SULF2 | sulfatase 2 | 0.0249938 |
| ANXA1 | annexin A1 | 0.0247099 |
| RAB6A | RAB6A, member RAS oncogene family | 0.0246932 |
| HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | 0.0246636 |
| LPP | LIM domain containing preferred translocation partner in lipoma | 0.02459 |
| PARD3 | par-3 family cell polarity regulator | 0.024231 |
| FAM13A | family with sequence similarity 13, member A | 0.0241817 |
| SYNE2 | spectrin repeat containing, nuclear envelope 2 | 0.0239632 |
| KIAA1671 | KIAA1671 | 0.0238084 |
| Symbol | Name | Standardized Value |
|---|---|---|
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.302075 |
| ITGA2 | integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) | -0.132741 |
| DCBLD2 | discoidin, CUB and LCCL domain containing 2 | -0.0983972 |
| WWC1 | WW and C2 domain containing 1 | -0.0822596 |
| RPS27A | ribosomal protein S27a | -0.0806645 |
| LAMA4 | laminin, alpha 4 | -0.0731196 |
| RPS6 | ribosomal protein S6 | -0.0703125 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | -0.0702981 |
| PCLO | piccolo presynaptic cytomatrix protein | -0.0700963 |
| LAMC2 | laminin, gamma 2 | -0.0685601 |
| UBC | ubiquitin C | -0.0683096 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | -0.0663155 |
| ETS1 | v-ets avian erythroblastosis virus E26 oncogene homolog 1 | -0.0659182 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.0654068 |
| CTNND1 | catenin (cadherin-associated protein), delta 1 | -0.0645995 |
| PARP14 | poly (ADP-ribose) polymerase family, member 14 | -0.0643713 |
| PHLDB2 | pleckstrin homology-like domain, family B, member 2 | -0.0620374 |
| DSG2 | desmoglein 2 | -0.0594353 |
| RPS3 | ribosomal protein S3 | -0.0585179 |
| VCL | vinculin | -0.0584019 |
| VMP1 | vacuole membrane protein 1 | -0.0579969 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.057582 |
| OSMR | oncostatin M receptor | -0.0570431 |
| THBS1 | thrombospondin 1 | -0.0558224 |
| MACF1 | microtubule-actin crosslinking factor 1 | -0.0544122 |
| HIVEP2 | human immunodeficiency virus type I enhancer binding protein 2 | -0.0541265 |
| ACTG1 | actin gamma 1 | -0.0498731 |
| NRIP1 | nuclear receptor interacting protein 1 | -0.047968 |
| SENP5 | SUMO1/sentrin specific peptidase 5 | -0.0470479 |
| MT2A | metallothionein 2A | -0.0469974 |
| MKI67 | marker of proliferation Ki-67 | -0.0469809 |
| POTEF | POTE ankyrin domain family, member F | -0.0469174 |
| RPS12 | ribosomal protein S12 | -0.0463334 |
| KRT8 | keratin 8, type II | -0.0455063 |
| DIAPH3 | diaphanous-related formin 3 | -0.0452541 |
| BCAR3 | breast cancer anti-estrogen resistance 3 | -0.0449834 |
| NCEH1 | neutral cholesterol ester hydrolase 1 | -0.0446152 |
| CANX | calnexin | -0.0445622 |
| ARHGAP26 | Rho GTPase activating protein 26 | -0.0442332 |
| SMURF2 | SMAD specific E3 ubiquitin protein ligase 2 | -0.0438774 |
| SENP6 | SUMO1/sentrin specific peptidase 6 | -0.04381 |
| ABTB2 | ankyrin repeat and BTB (POZ) domain containing 2 | -0.0436076 |
| RPL23 | ribosomal protein L23 | -0.0431475 |
| RPL26 | ribosomal protein L26 | -0.0430489 |
| SMYD3 | SET and MYND domain containing 3 | -0.04277 |
| STAT1 | signal transducer and activator of transcription 1, 91kDa | -0.0424787 |
| RPL12 | ribosomal protein L12 | -0.0421374 |
| RPS8 | ribosomal protein S8 | -0.0418814 |
| SMC4 | structural maintenance of chromosomes 4 | -0.0413062 |
| IL1RAP | interleukin 1 receptor accessory protein | -0.0410952 |
| RPL37A | ribosomal protein L37a | -0.0410584 |
| BCL2L1 | BCL2-like 1 | -0.0407575 |
| FAF1 | Fas (TNFRSF6) associated factor 1 | -0.0407376 |
| GOLGB1 | golgin B1 | -0.0404537 |
| KRT17 | keratin 17, type I | -0.0403626 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | -0.040264 |
| ZBTB20 | zinc finger and BTB domain containing 20 | -0.0398736 |
| RPS2 | ribosomal protein S2 | -0.0397168 |
| GOLGA4 | golgin A4 | -0.0396354 |
| IL6ST | interleukin 6 signal transducer | -0.039624 |
| NFKB1 | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 | -0.0395903 |
| HSP90AA1 | heat shock protein 90kDa alpha (cytosolic), class A member 1 | -0.0381084 |
| NEDD4L | neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase | -0.0379396 |
| CTNNB1 | catenin (cadherin-associated protein), beta 1, 88kDa | -0.0379386 |
| NF1 | neurofibromin 1 | -0.0377079 |
| RPL9 | ribosomal protein L9 | -0.0375642 |
| RAD51B | RAD51 paralog B | -0.0368489 |
| PLAT | plasminogen activator, tissue | -0.0366912 |
| GPHN | gephyrin | -0.0360976 |
| MUC4 | mucin 4, cell surface associated | -0.0357329 |
| STK24 | serine/threonine kinase 24 | -0.0356975 |
| CALM2 | calmodulin 2 (phosphorylase kinase, delta) | -0.0354457 |
| RPL19 | ribosomal protein L19 | -0.0347743 |
| FHIT | fragile histidine triad | -0.0345784 |
| PLSCR1 | phospholipid scramblase 1 | -0.034025 |
| ACTN4 | actinin, alpha 4 | -0.0339603 |
| RPS29 | ribosomal protein S29 | -0.033785 |
| RPS23 | ribosomal protein S23 | -0.0335861 |
| CMSS1 | cms1 ribosomal small subunit homolog (yeast) | -0.0333043 |
| ATAD2 | ATPase family, AAA domain containing 2 | -0.0330601 |
| ZC3H13 | zinc finger CCCH-type containing 13 | -0.0329525 |
| EIF4A2 | eukaryotic translation initiation factor 4A2 | -0.0325829 |
| RPS13 | ribosomal protein S13 | -0.0324869 |
| NR3C1 | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | -0.0321736 |
| ANKRD12 | ankyrin repeat domain 12 | -0.0319054 |
| CTNNA1 | catenin (cadherin-associated protein), alpha 1, 102kDa | -0.0317543 |
| LATS2 | large tumor suppressor kinase 2 | -0.0316606 |
| TNFRSF21 | tumor necrosis factor receptor superfamily, member 21 | -0.0315676 |
| TGM2 | transglutaminase 2 | -0.0315022 |
| RPS15 | ribosomal protein S15 | -0.0308831 |
| ARL15 | ADP-ribosylation factor-like 15 | -0.030564 |
| RALGAPA1 | Ral GTPase activating protein, alpha subunit 1 (catalytic) | -0.0305216 |
| RPL37 | ribosomal protein L37 | -0.0303871 |
| TMSB10 | thymosin beta 10 | -0.0303308 |
| RNF19A | ring finger protein 19A, RBR E3 ubiquitin protein ligase | -0.030173 |
| RASAL2 | RAS protein activator like 2 | -0.030084 |
| RPL31 | ribosomal protein L31 | -0.0299474 |
| VPS13B | vacuolar protein sorting 13 homolog B (yeast) | -0.0298389 |
| ARB2A | ARB2 cotranscriptional regulator A | -0.0296876 |
| RPL32 | ribosomal protein L32 | -0.0294512 |
