| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Berbamine perturbation in Hs 766T cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Berbamine_Hs 766T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| NDRG1 | N-myc downstream regulated 1 | 0.14854 |
| GPRC5A | G protein-coupled receptor, class C, group 5, member A | 0.136176 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.135289 |
| PLEC | plectin | 0.120261 |
| FLNB | filamin B, beta | 0.118698 |
| MEF2A | myocyte enhancer factor 2A | 0.117506 |
| MTSS1 | metastasis suppressor 1 | 0.11079 |
| TGM2 | transglutaminase 2 | 0.106803 |
| PODXL | podocalyxin-like | 0.0955388 |
| MSN | moesin | 0.094408 |
| MYH9 | myosin, heavy chain 9, non-muscle | 0.0852785 |
| RAI14 | retinoic acid induced 14 | 0.0841929 |
| CEMIP | cell migration inducing protein, hyaluronan binding | 0.0812286 |
| KIAA1217 | KIAA1217 | 0.0766644 |
| RICTOR | RPTOR independent companion of MTOR, complex 2 | 0.0747406 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 0.0746181 |
| NAV2 | neuron navigator 2 | 0.0734569 |
| SLCO4A1 | solute carrier organic anion transporter family, member 4A1 | 0.0721353 |
| NCOR2 | nuclear receptor corepressor 2 | 0.0716739 |
| BLCAP | bladder cancer associated protein | 0.0669673 |
| KCNMA1 | potassium channel, calcium activated large conductance subfamily M alpha, member 1 | 0.0659746 |
| NAMPT | nicotinamide phosphoribosyltransferase | 0.0639848 |
| HSPG2 | heparan sulfate proteoglycan 2 | 0.0585267 |
| PRELID2 | PRELI domain containing 2 | 0.0561779 |
| EFHD2 | EF-hand domain family, member D2 | 0.0556587 |
| CLU | clusterin | 0.052936 |
| ZNF292 | zinc finger protein 292 | 0.0528857 |
| SLC2A1 | solute carrier family 2 (facilitated glucose transporter), member 1 | 0.0522979 |
| OGA | O-GlcNAcase | 0.0519417 |
| EZR | ezrin | 0.0517379 |
| TINAGL1 | tubulointerstitial nephritis antigen-like 1 | 0.0517256 |
| LAMA5 | laminin, alpha 5 | 0.0514133 |
| FNIP1 | folliculin interacting protein 1 | 0.0510592 |
| PTK2 | protein tyrosine kinase 2 | 0.049957 |
| KMT2E | lysine (K)-specific methyltransferase 2E | 0.0478299 |
| ESYT2 | extended synaptotagmin-like protein 2 | 0.0473804 |
| RERE | arginine-glutamic acid dipeptide (RE) repeats | 0.0466987 |
| PGK1 | phosphoglycerate kinase 1 | 0.0459689 |
| SERPINE1 | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 0.0457345 |
| TNIP1 | TNFAIP3 interacting protein 1 | 0.0454263 |
| ETS1 | v-ets avian erythroblastosis virus E26 oncogene homolog 1 | 0.0447427 |
| FNDC3B | fibronectin type III domain containing 3B | 0.0446081 |
| MYO10 | myosin X | 0.0442279 |
| DIDO1 | death inducer-obliterator 1 | 0.043107 |
| DHRS3 | dehydrogenase/reductase (SDR family) member 3 | 0.042724 |
| SH3PXD2A | SH3 and PX domains 2A | 0.0420586 |
| EPHA2 | EPH receptor A2 | 0.0417643 |
| ITCH | itchy E3 ubiquitin protein ligase | 0.0417512 |
| CDKN2A | cyclin-dependent kinase inhibitor 2A | 0.0413784 |
| TPM3 | tropomyosin 3 | 0.0410314 |
| RNF145 | ring finger protein 145 | 0.0406972 |
| ANKH | ANKH inorganic pyrophosphate transport regulator | 0.0397698 |
| AKAP13 | A kinase (PRKA) anchor protein 13 | 0.0394788 |
| HERC3 | HECT and RLD domain containing E3 ubiquitin protein ligase 3 | 0.0379395 |
| FHIP1A | FHF complex subunit HOOK interacting protein 1A | 0.0376152 |
| CEP250 | centrosomal protein 250kDa | 0.0373357 |
| MBNL2 | muscleblind-like splicing regulator 2 | 0.0370367 |
| UBA6 | ubiquitin-like modifier activating enzyme 6 | 0.036972 |
| KIF16B | kinesin family member 16B | 0.0364552 |
| SLC5A3 | solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 | 0.0364026 |
| SULF1 | sulfatase 1 | 0.0357246 |
| MYOF | myoferlin | 0.034882 |
| KDM6A | lysine (K)-specific demethylase 6A | 0.0348584 |
| YAP1 | Yes-associated protein 1 | 0.0346577 |
| ITGA5 | integrin, alpha 5 (fibronectin receptor, alpha polypeptide) | 0.0345244 |
| SMAD3 | SMAD family member 3 | 0.0342457 |
| ADAMTS16 | ADAM metallopeptidase with thrombospondin type 1 motif, 16 | 0.0342101 |
| YEATS2 | YEATS domain containing 2 | 0.0336494 |
| TMEM165 | transmembrane protein 165 | 0.0333638 |
| HIVEP3 | human immunodeficiency virus type I enhancer binding protein 3 | 0.0329557 |
| PCBP2 | poly(rC) binding protein 2 | 0.0328966 |
| PTPRJ | protein tyrosine phosphatase, receptor type, J | 0.0325004 |
| DSTN | destrin (actin depolymerizing factor) | 0.0319829 |
| HSD17B2 | hydroxysteroid (17-beta) dehydrogenase 2 | 0.0310973 |
| GRB10 | growth factor receptor-bound protein 10 | 0.0307745 |
| GOLGA4 | golgin A4 | 0.0307734 |
| DOK5 | docking protein 5 | 0.03072 |
| GATA6 | GATA binding protein 6 | 0.0306564 |
| SRRM2 | serine/arginine repetitive matrix 2 | 0.0302778 |
| ARHGAP29 | Rho GTPase activating protein 29 | 0.0300765 |
| MEGF6 | multiple EGF-like-domains 6 | 0.029584 |
| PCDH1 | protocadherin 1 | 0.029351 |
| SLC6A6 | solute carrier family 6 (neurotransmitter transporter), member 6 | 0.0290374 |
| HNRNPU | heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) | 0.0290366 |
| ANXA11 | annexin A11 | 0.0288633 |
| ECPAS | Ecm29 proteasome adaptor and scaffold | 0.0288398 |
| KDM7A | lysine (K)-specific demethylase 7A | 0.0287009 |
| ITGB4 | integrin, beta 4 | 0.028647 |
| ARRDC3 | arrestin domain containing 3 | 0.0282546 |
| OSBPL6 | oxysterol binding protein-like 6 | 0.0281843 |
| HELZ | helicase with zinc finger | 0.0280878 |
| EGLN3 | egl-9 family hypoxia-inducible factor 3 | 0.0278687 |
| MACF1 | microtubule-actin crosslinking factor 1 | 0.02777 |
| DSCAM | Down syndrome cell adhesion molecule | 0.0275147 |
| PPARG | peroxisome proliferator-activated receptor gamma | 0.0273594 |
| GBE1 | glucan (1,4-alpha-), branching enzyme 1 | 0.0272019 |
| MCL1 | myeloid cell leukemia 1 | 0.0271547 |
| RNF19B | ring finger protein 19B | 0.0271165 |
| PDK3 | pyruvate dehydrogenase kinase, isozyme 3 | 0.0270078 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 0.0268202 |
| Symbol | Name | Standardized Value |
|---|---|---|
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | -0.272083 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.117187 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.0982907 |
| CD44 | CD44 molecule (Indian blood group) | -0.088256 |
| VCL | vinculin | -0.0857564 |
| PALLD | palladin, cytoskeletal associated protein | -0.0775278 |
| LMO7 | LIM domain 7 | -0.0715666 |
| ARL6IP1 | ADP-ribosylation factor-like 6 interacting protein 1 | -0.0643154 |
| SAMD9 | sterile alpha motif domain containing 9 | -0.0529001 |
| S100A10 | S100 calcium binding protein A10 | -0.0524071 |
| RIGI | RNA sensor RIG-I | -0.0518465 |
| ALCAM | activated leukocyte cell adhesion molecule | -0.0484652 |
| IFIT2 | interferon-induced protein with tetratricopeptide repeats 2 | -0.0482794 |
| PDLIM5 | PDZ and LIM domain 5 | -0.0473079 |
| FOXO1 | forkhead box O1 | -0.0467486 |
| PHLDB2 | pleckstrin homology-like domain, family B, member 2 | -0.0464548 |
| ZC3HAV1 | zinc finger CCCH-type, antiviral 1 | -0.0441648 |
| IFIT3 | interferon-induced protein with tetratricopeptide repeats 3 | -0.0425937 |
| PALM2AKAP2 | PALM2 and AKAP2 fusion | -0.0420478 |
| GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | -0.0420126 |
| LDHA | lactate dehydrogenase A | -0.0417194 |
| DPYD | dihydropyrimidine dehydrogenase | -0.0399821 |
| MBNL1 | muscleblind-like splicing regulator 1 | -0.0378281 |
| CAV1 | caveolin 1, caveolae protein, 22kDa | -0.0367206 |
| NEK7 | NIMA-related kinase 7 | -0.0361596 |
| INTS6 | integrator complex subunit 6 | -0.0352842 |
| YWHAB | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta | -0.0350963 |
| RPLP1 | ribosomal protein, large, P1 | -0.0330187 |
| EGR1 | early growth response 1 | -0.0328355 |
| ZSWIM6 | zinc finger, SWIM-type containing 6 | -0.0322082 |
| MORF4L2 | mortality factor 4 like 2 | -0.0320564 |
| PMAIP1 | phorbol-12-myristate-13-acetate-induced protein 1 | -0.0320084 |
| IFI6 | interferon, alpha-inducible protein 6 | -0.031375 |
| RPS24 | ribosomal protein S24 | -0.0311979 |
| ATP1B1 | ATPase, Na+/K+ transporting, beta 1 polypeptide | -0.0309403 |
| RASAL2 | RAS protein activator like 2 | -0.0297472 |
| CAVIN1 | caveolae associated protein 1 | -0.0293859 |
| ARF1 | ADP-ribosylation factor 1 | -0.0289389 |
| MKI67 | marker of proliferation Ki-67 | -0.0285892 |
| LRRFIP1 | leucine rich repeat (in FLII) interacting protein 1 | -0.0284682 |
| ANXA2 | annexin A2 | -0.0282727 |
| TXNRD1 | thioredoxin reductase 1 | -0.0279353 |
| RAB10 | RAB10, member RAS oncogene family | -0.0278989 |
| WNT2B | wingless-type MMTV integration site family, member 2B | -0.0278338 |
| PITPNB | phosphatidylinositol transfer protein, beta | -0.0276753 |
| OSMR | oncostatin M receptor | -0.0275396 |
| DDAH1 | dimethylarginine dimethylaminohydrolase 1 | -0.0273652 |
| SEMA4A | sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A | -0.0272474 |
| IFITM3 | interferon induced transmembrane protein 3 | -0.0264979 |
| SP100 | SP100 nuclear antigen | -0.0264875 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.026187 |
| ZNFX1 | zinc finger, NFX1-type containing 1 | -0.0258876 |
| SERPINB5 | serpin peptidase inhibitor, clade B (ovalbumin), member 5 | -0.0257444 |
| ARPC5 | actin related protein 2/3 complex, subunit 5, 16kDa | -0.0255131 |
| MTAP | methylthioadenosine phosphorylase | -0.025498 |
| TOP2A | topoisomerase (DNA) II alpha 170kDa | -0.0254831 |
| SULF2 | sulfatase 2 | -0.0254694 |
| FBXO11 | F-box protein 11 | -0.0251024 |
| THBD | thrombomodulin | -0.0247357 |
| VDAC1 | voltage-dependent anion channel 1 | -0.0247002 |
| STAU1 | staufen double-stranded RNA binding protein 1 | -0.0242766 |
| IFIH1 | interferon induced with helicase C domain 1 | -0.02409 |
| RPS8 | ribosomal protein S8 | -0.0233948 |
| ANKHD1 | ankyrin repeat and KH domain containing 1 | -0.023329 |
| TSC22D1 | TSC22 domain family, member 1 | -0.0232268 |
| PTMA | prothymosin, alpha | -0.0232185 |
| S100A11 | S100 calcium binding protein A11 | -0.0220228 |
| UGGT2 | UDP-glucose glycoprotein glucosyltransferase 2 | -0.0219568 |
| FAM107B | family with sequence similarity 107, member B | -0.0219422 |
| EMP1 | epithelial membrane protein 1 | -0.0216591 |
| S100A6 | S100 calcium binding protein A6 | -0.0214504 |
| ANKRD28 | ankyrin repeat domain 28 | -0.0214052 |
| CYSTM1 | cysteine-rich transmembrane module containing 1 | -0.0211022 |
| TJP1 | tight junction protein 1 | -0.0210118 |
| RSAD2 | radical S-adenosyl methionine domain containing 2 | -0.0210112 |
| RPL34 | ribosomal protein L34 | -0.0210097 |
| DKK1 | dickkopf WNT signaling pathway inhibitor 1 | -0.0207337 |
| SETX | senataxin | -0.0206091 |
| NIPBL | Nipped-B homolog (Drosophila) | -0.0204682 |
| IER3 | immediate early response 3 | -0.0204261 |
| IFITM1 | interferon induced transmembrane protein 1 | -0.020253 |
| AGO2 | argonaute RISC catalytic component 2 | -0.0200562 |
| SLC38A2 | solute carrier family 38, member 2 | -0.0199934 |
| CORO2A | coronin, actin binding protein, 2A | -0.0199141 |
| RPLP0 | ribosomal protein, large, P0 | -0.0198459 |
| MYO1E | myosin IE | -0.0197432 |
| BMAL2 | basic helix-loop-helix ARNT like 2 | -0.0196931 |
| CUL4B | cullin 4B | -0.0196487 |
| RPS27A | ribosomal protein S27a | -0.0195264 |
| LUZP1 | leucine zipper protein 1 | -0.0194325 |
| FNDC3A | fibronectin type III domain containing 3A | -0.0193116 |
| RAB7A | RAB7A, member RAS oncogene family | -0.0193058 |
| RRBP1 | ribosome binding protein 1 | -0.0192971 |
| CRK | v-crk avian sarcoma virus CT10 oncogene homolog | -0.0192335 |
| SLC12A6 | solute carrier family 12 (potassium/chloride transporter), member 6 | -0.0189088 |
| RPL39 | ribosomal protein L39 | -0.0188986 |
| ERC2 | ELKS/RAB6-interacting/CAST family member 2 | -0.0185049 |
| RAD21 | RAD21 homolog (S. pombe) | -0.0182199 |
| RCOR1 | REST corepressor 1 | -0.0180817 |
| ARHGAP5 | Rho GTPase activating protein 5 | -0.0177388 |
