| Dataset | Tahoe Therapeutics Tahoe 100M Perturbation Atlas |
| Category | transcriptomics |
| Type | cell type |
| Description | Bergenin perturbation in SNU-1 cell line (Tahoe Therapeutics) |
| Similar Terms | |
| Downloads & Tools |
200 genes differentially expressed following the Bergenin_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.
| Symbol | Name | Standardized Value |
|---|---|---|
| RPL3 | ribosomal protein L3 | 0.0530345 |
| CITED2 | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 | 0.0436148 |
| TXNRD1 | thioredoxin reductase 1 | 0.0430375 |
| BNIP3L | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 0.0396464 |
| ZNF608 | zinc finger protein 608 | 0.039415 |
| MACROD2 | MACRO domain containing 2 | 0.0377967 |
| DSCAM | Down syndrome cell adhesion molecule | 0.0339411 |
| EZR | ezrin | 0.0334421 |
| RBM25 | RNA binding motif protein 25 | 0.0320063 |
| IMMP2L | IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) | 0.0303579 |
| AHCYL2 | adenosylhomocysteinase-like 2 | 0.02932 |
| RRBP1 | ribosome binding protein 1 | 0.0290152 |
| CACNB4 | calcium channel, voltage-dependent, beta 4 subunit | 0.0273034 |
| H1-4 | H1.4 linker histone, cluster member | 0.0270011 |
| GCLM | glutamate-cysteine ligase, modifier subunit | 0.0256587 |
| SBF2 | SET binding factor 2 | 0.0256128 |
| CSF1 | colony stimulating factor 1 (macrophage) | 0.0253468 |
| TXNIP | thioredoxin interacting protein | 0.0245019 |
| YEATS2 | YEATS domain containing 2 | 0.0243491 |
| DNM1L | dynamin 1-like | 0.024028 |
| TRIO | trio Rho guanine nucleotide exchange factor | 0.0232199 |
| GSE1 | Gse1 coiled-coil protein | 0.0231462 |
| FAM13A | family with sequence similarity 13, member A | 0.0230798 |
| FAM91A1 | family with sequence similarity 91, member A1 | 0.0230295 |
| SMC3 | structural maintenance of chromosomes 3 | 0.0228139 |
| RNF213 | ring finger protein 213 | 0.0226953 |
| BLTP1 | bridge-like lipid transfer protein family member 1 | 0.0223805 |
| ECPAS | Ecm29 proteasome adaptor and scaffold | 0.0218551 |
| EIF3A | eukaryotic translation initiation factor 3, subunit A | 0.0217535 |
| RSF1 | remodeling and spacing factor 1 | 0.0206216 |
| ZMYM2 | zinc finger, MYM-type 2 | 0.0205854 |
| BNIP3 | BCL2/adenovirus E1B 19kDa interacting protein 3 | 0.0205687 |
| SLC2A13 | solute carrier family 2 (facilitated glucose transporter), member 13 | 0.0203154 |
| SFTPA2 | surfactant protein A2 | 0.0201642 |
| ANKRD36 | ankyrin repeat domain 36 | 0.0201214 |
| FRYL | FRY-like | 0.019693 |
| ITFG1 | integrin alpha FG-GAP repeat containing 1 | 0.019488 |
| MPP2 | membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) | 0.0194254 |
| LANCL2 | LanC lantibiotic synthetase component C-like 2 (bacterial) | 0.0187318 |
| UBAP2L | ubiquitin associated protein 2-like | 0.0185778 |
| PCBP1 | poly(rC) binding protein 1 | 0.0184444 |
| WASL | Wiskott-Aldrich syndrome-like | 0.0183794 |
| KDM4C | lysine (K)-specific demethylase 4C | 0.0182711 |
| LUC7L3 | LUC7-like 3 (S. cerevisiae) | 0.0181695 |
| SUCO | SUN domain containing ossification factor | 0.0180839 |
| DENND5A | DENN/MADD domain containing 5A | 0.0180302 |
| YAP1 | Yes-associated protein 1 | 0.0179347 |
| FUBP3 | far upstream element (FUSE) binding protein 3 | 0.0179056 |
| VOPP1 | vesicular, overexpressed in cancer, prosurvival protein 1 | 0.0177474 |
| HELZ | helicase with zinc finger | 0.0177209 |
| RAPH1 | Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 | 0.0176366 |
| CHSY1 | chondroitin sulfate synthase 1 | 0.0173313 |
| ARRDC3 | arrestin domain containing 3 | 0.0173249 |
| KIF5C | kinesin family member 5C | 0.0172821 |
| PICALM | phosphatidylinositol binding clathrin assembly protein | 0.0172519 |
| CUL4A | cullin 4A | 0.0172409 |
| CHD1L | chromodomain helicase DNA binding protein 1-like | 0.0172058 |
| SLMAP | sarcolemma associated protein | 0.0172048 |
| RAB18 | RAB18, member RAS oncogene family | 0.0171848 |
| NXN | nucleoredoxin | 0.0170599 |
| TPD52 | tumor protein D52 | 0.0169682 |
| MT2A | metallothionein 2A | 0.0166938 |
| ENO1 | enolase 1, (alpha) | 0.0166936 |
| RPS2 | ribosomal protein S2 | 0.0166848 |
| ATRX | alpha thalassemia/mental retardation syndrome X-linked | 0.0166231 |
| IBTK | inhibitor of Bruton agammaglobulinemia tyrosine kinase | 0.0164914 |
| BLOC1S6 | biogenesis of lysosomal organelles complex-1, subunit 6, pallidin | 0.0164826 |
| RIOK3 | RIO kinase 3 | 0.016482 |
| HIPK3 | homeodomain interacting protein kinase 3 | 0.0164396 |
| KPNA5 | karyopherin alpha 5 (importin alpha 6) | 0.0162433 |
| CAMK2D | calcium/calmodulin-dependent protein kinase II delta | 0.0161951 |
| CDK19 | cyclin-dependent kinase 19 | 0.016175 |
| USP37 | ubiquitin specific peptidase 37 | 0.0160142 |
| SDK1 | sidekick cell adhesion molecule 1 | 0.0160082 |
| LRRC7 | leucine rich repeat containing 7 | 0.0159245 |
| ALDH3A2 | aldehyde dehydrogenase 3 family, member A2 | 0.0158004 |
| ANXA2 | annexin A2 | 0.015734 |
| FCHSD2 | FCH and double SH3 domains 2 | 0.015685 |
| PCBP2 | poly(rC) binding protein 2 | 0.0156178 |
| APLP2 | amyloid beta (A4) precursor-like protein 2 | 0.0155375 |
| SMURF2 | SMAD specific E3 ubiquitin protein ligase 2 | 0.0155084 |
| ATG10 | autophagy related 10 | 0.0154953 |
| NPM1 | nucleophosmin (nucleolar phosphoprotein B23, numatrin) | 0.0154862 |
| NCOA2 | nuclear receptor coactivator 2 | 0.0154035 |
| ARF4 | ADP-ribosylation factor 4 | 0.0153556 |
| SPRY1 | sprouty homolog 1, antagonist of FGF signaling (Drosophila) | 0.0153394 |
| PPP2CB | protein phosphatase 2, catalytic subunit, beta isozyme | 0.0152815 |
| MBNL1 | muscleblind-like splicing regulator 1 | 0.0151836 |
| KDM5D | lysine (K)-specific demethylase 5D | 0.0151516 |
| MYH10 | myosin, heavy chain 10, non-muscle | 0.0150899 |
| TBC1D5 | TBC1 domain family, member 5 | 0.0150853 |
| MYO5A | myosin VA (heavy chain 12, myoxin) | 0.0150508 |
| NONO | non-POU domain containing, octamer-binding | 0.0150457 |
| DCAF6 | DDB1 and CUL4 associated factor 6 | 0.0149892 |
| FLNA | filamin A, alpha | 0.0149889 |
| DTNBP1 | dystrobrevin binding protein 1 | 0.0149809 |
| TBC1D20 | TBC1 domain family, member 20 | 0.0149618 |
| PLK2 | polo-like kinase 2 | 0.014915 |
| RAPGEF2 | Rap guanine nucleotide exchange factor (GEF) 2 | 0.0149131 |
| MACO1 | macoilin 1 | 0.0148632 |
| Symbol | Name | Standardized Value |
|---|---|---|
| PDE4B | phosphodiesterase 4B, cAMP-specific | -0.263403 |
| RBMS3 | RNA binding motif, single stranded interacting protein 3 | -0.193246 |
| CPED1 | cadherin-like and PC-esterase domain containing 1 | -0.162254 |
| GAPDH | glyceraldehyde-3-phosphate dehydrogenase | -0.133108 |
| PTMA | prothymosin, alpha | -0.127568 |
| BMP10 | bone morphogenetic protein 10 | -0.127123 |
| SSBP2 | single-stranded DNA binding protein 2 | -0.115309 |
| TMSB4X | thymosin beta 4, X-linked | -0.114523 |
| FOXP1 | forkhead box P1 | -0.102211 |
| DLG1 | discs, large homolog 1 (Drosophila) | -0.101968 |
| TPT1 | tumor protein, translationally-controlled 1 | -0.10179 |
| ZEB1 | zinc finger E-box binding homeobox 1 | -0.0950084 |
| NFE2L2 | nuclear factor, erythroid 2-like 2 | -0.0892368 |
| RPL35A | ribosomal protein L35a | -0.0846367 |
| SCD | stearoyl-CoA desaturase (delta-9-desaturase) | -0.0816292 |
| HSP90B1 | heat shock protein 90kDa beta (Grp94), member 1 | -0.0795694 |
| B3GALT1 | UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 | -0.0791399 |
| ENOX1 | ecto-NOX disulfide-thiol exchanger 1 | -0.0774775 |
| TJP1 | tight junction protein 1 | -0.0725847 |
| NBEA | neurobeachin | -0.0711139 |
| EGFR | epidermal growth factor receptor | -0.0700067 |
| VCL | vinculin | -0.0696607 |
| AHNAK | AHNAK nucleoprotein | -0.0674583 |
| LDHA | lactate dehydrogenase A | -0.0670827 |
| CAMKMT | calmodulin-lysine N-methyltransferase | -0.0660403 |
| MTHFD1L | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like | -0.06602 |
| NFAT5 | nuclear factor of activated T-cells 5, tonicity-responsive | -0.0647242 |
| GARS1 | glycyl-tRNA synthetase 1 | -0.0636841 |
| PDE4D | phosphodiesterase 4D, cAMP-specific | -0.0632785 |
| TNFRSF11B | tumor necrosis factor receptor superfamily, member 11b | -0.0624503 |
| IARS1 | isoleucyl-tRNA synthetase 1 | -0.0550517 |
| ZFAND3 | zinc finger, AN1-type domain 3 | -0.0550145 |
| EFNA5 | ephrin-A5 | -0.0537427 |
| NFIA | nuclear factor I/A | -0.0521181 |
| CRPPA | CDP-L-ribitol pyrophosphorylase A | -0.0509616 |
| DPYD | dihydropyrimidine dehydrogenase | -0.050148 |
| RPL34 | ribosomal protein L34 | -0.0500648 |
| HSPA5 | heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) | -0.049617 |
| EPS8 | epidermal growth factor receptor pathway substrate 8 | -0.0494983 |
| PDE7B | phosphodiesterase 7B | -0.0493622 |
| RPS24 | ribosomal protein S24 | -0.0487382 |
| GNB1 | guanine nucleotide binding protein (G protein), beta polypeptide 1 | -0.0486355 |
| RPL9 | ribosomal protein L9 | -0.0479961 |
| CALM2 | calmodulin 2 (phosphorylase kinase, delta) | -0.0465128 |
| ASXL1 | additional sex combs like transcriptional regulator 1 | -0.0456007 |
| PKM | pyruvate kinase, muscle | -0.0449387 |
| ECT2 | epithelial cell transforming 2 | -0.0441884 |
| NCEH1 | neutral cholesterol ester hydrolase 1 | -0.0440554 |
| DENND1A | DENN/MADD domain containing 1A | -0.0439436 |
| TCF12 | transcription factor 12 | -0.0436582 |
| INTS6 | integrator complex subunit 6 | -0.0429868 |
| NEBL | nebulette | -0.0419765 |
| ANKRD11 | ankyrin repeat domain 11 | -0.0418846 |
| SLC38A2 | solute carrier family 38, member 2 | -0.0418297 |
| S100A6 | S100 calcium binding protein A6 | -0.0416674 |
| PARD3 | par-3 family cell polarity regulator | -0.0415631 |
| CCND1 | cyclin D1 | -0.0412698 |
| CUX1 | cut-like homeobox 1 | -0.041245 |
| TEAD1 | TEA domain family member 1 (SV40 transcriptional enhancer factor) | -0.0407804 |
| RPL31 | ribosomal protein L31 | -0.0405163 |
| CLIC4 | chloride intracellular channel 4 | -0.0403261 |
| BMP2K | BMP2 inducible kinase | -0.0403064 |
| RPS13 | ribosomal protein S13 | -0.0402892 |
| HNRNPD | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) | -0.0391413 |
| INPP4B | inositol polyphosphate-4-phosphatase, type II, 105kDa | -0.0388571 |
| KPNB1 | karyopherin (importin) beta 1 | -0.0386284 |
| EVI5 | ecotropic viral integration site 5 | -0.0385074 |
| RPL26 | ribosomal protein L26 | -0.0382887 |
| DYRK1A | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A | -0.0363441 |
| TSC22D1 | TSC22 domain family, member 1 | -0.0357806 |
| UBE3C | ubiquitin protein ligase E3C | -0.0357176 |
| RPL13A | ribosomal protein L13a | -0.0348976 |
| PPM1B | protein phosphatase, Mg2+/Mn2+ dependent, 1B | -0.0341461 |
| KIAA2026 | KIAA2026 | -0.0339123 |
| EIF2S2 | eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa | -0.0338365 |
| LPP | LIM domain containing preferred translocation partner in lipoma | -0.033738 |
| KDM4B | lysine (K)-specific demethylase 4B | -0.0334377 |
| PABPC1 | poly(A) binding protein, cytoplasmic 1 | -0.0333729 |
| RHOA | ras homolog family member A | -0.0332411 |
| TBCA | tubulin folding cofactor A | -0.0328146 |
| S100A4 | S100 calcium binding protein A4 | -0.0323142 |
| MSRB3 | methionine sulfoxide reductase B3 | -0.0321012 |
| MEF2A | myocyte enhancer factor 2A | -0.0316573 |
| DNMBP | dynamin binding protein | -0.0311705 |
| ZMYND8 | zinc finger, MYND-type containing 8 | -0.0310857 |
| CLIP1 | CAP-GLY domain containing linker protein 1 | -0.0309007 |
| CD55 | CD55 molecule, decay accelerating factor for complement (Cromer blood group) | -0.0308381 |
| MICAL2 | microtubule associated monooxygenase, calponin and LIM domain containing 2 | -0.0308297 |
| SRRM2 | serine/arginine repetitive matrix 2 | -0.0304599 |
| NAB1 | NGFI-A binding protein 1 (EGR1 binding protein 1) | -0.0303189 |
| NUCKS1 | nuclear casein kinase and cyclin-dependent kinase substrate 1 | -0.0298449 |
| ONECUT2 | one cut homeobox 2 | -0.0298432 |
| LOC112694756 | uncharaterized LOC112694756 | -0.0294728 |
| TAOK1 | TAO kinase 1 | -0.0288996 |
| RPL5 | ribosomal protein L5 | -0.028746 |
| ALDH1A2 | aldehyde dehydrogenase 1 family, member A2 | -0.0287423 |
| ZCCHC7 | zinc finger, CCHC domain containing 7 | -0.0285409 |
| TTC17 | tetratricopeptide repeat domain 17 | -0.0281648 |
| CRK | v-crk avian sarcoma virus CT10 oncogene homolog | -0.0280639 |
| CYB5B | cytochrome b5 type B (outer mitochondrial membrane) | -0.0280152 |
