Bestatin (hydrochloride)_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0517661
VCL vinculin 0.0467898
LPIN1 lipin 1 0.0438658
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0415339
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0413307
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0386379
AKAP12 A kinase (PRKA) anchor protein 12 0.0375159
OGA O-GlcNAcase 0.0366553
NFE2L1 nuclear factor, erythroid 2-like 1 0.0330835
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0323422
HMGB2 high mobility group box 2 0.0289584
CANX calnexin 0.0282545
APP amyloid beta (A4) precursor protein 0.0281201
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0280869
EIF4B eukaryotic translation initiation factor 4B 0.027268
NAMPT nicotinamide phosphoribosyltransferase 0.0264721
PDIA6 protein disulfide isomerase family A, member 6 0.0258142
KCNIP4 Kv channel interacting protein 4 0.0257142
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0249727
MBNL2 muscleblind-like splicing regulator 2 0.0245897
VGF VGF nerve growth factor inducible 0.0244907
MYH9 myosin, heavy chain 9, non-muscle 0.0241884
CCNL1 cyclin L1 0.023951
AUTS2 autism susceptibility candidate 2 0.0239273
KDM3A lysine (K)-specific demethylase 3A 0.0229943
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0225067
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.0223853
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0221002
DDIT4 DNA-damage-inducible transcript 4 0.0218713
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0216289
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0215801
PPP1R15B protein phosphatase 1, regulatory subunit 15B 0.0211147
MCL1 myeloid cell leukemia 1 0.0210031
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0207537
ZMAT3 zinc finger, matrin-type 3 0.0206091
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.0203155
EEF2 eukaryotic translation elongation factor 2 0.0202887
PLPP1 phospholipid phosphatase 1 0.020239
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0198973
STK38L serine/threonine kinase 38 like 0.0194647
TPM4 tropomyosin 4 0.0192396
DDR2 discoidin domain receptor tyrosine kinase 2 0.019115
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0189457
MYO9A myosin IXA 0.0188731
YTHDC1 YTH domain containing 1 0.018706
SEPTIN2 septin 2 0.0184676
AHNAK AHNAK nucleoprotein 0.0184252
GREB1 growth regulation by estrogen in breast cancer 1 0.0183922
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0178904
APTX aprataxin 0.0178206
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0174993
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.017391
ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 0.0171222
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0165835
TNPO1 transportin 1 0.0164481
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0163978
COL3A1 collagen, type III, alpha 1 0.0163235
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0162768
SGMS1 sphingomyelin synthase 1 0.0161672
GARS1 glycyl-tRNA synthetase 1 0.0160489
CEMIP2 cell migration inducing hyaluronidase 2 0.0159051
UBA6 ubiquitin-like modifier activating enzyme 6 0.0159003
CASC3 cancer susceptibility candidate 3 0.0158856
DLC1 DLC1 Rho GTPase activating protein 0.0157988
CTNND1 catenin (cadherin-associated protein), delta 1 0.0157572
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0157288
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0156717
SOD2 superoxide dismutase 2, mitochondrial 0.0153794
XPO1 exportin 1 0.0151966
KDM4C lysine (K)-specific demethylase 4C 0.0151549
CCDC47 coiled-coil domain containing 47 0.0149427
CALU calumenin 0.0149106
ADARB1 adenosine deaminase, RNA-specific, B1 0.0148734
PDLIM5 PDZ and LIM domain 5 0.0148346
SRSF1 serine/arginine-rich splicing factor 1 0.0148204
RIOK3 RIO kinase 3 0.014745
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0147078
PDIA4 protein disulfide isomerase family A, member 4 0.0146717
FERMT2 fermitin family member 2 0.0145946
PHF3 PHD finger protein 3 0.0143879
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0143807
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.014307
RAP1B RAP1B, member of RAS oncogene family 0.0142967
ANKRD17 ankyrin repeat domain 17 0.0142522
ARB2A ARB2 cotranscriptional regulator A 0.0140906
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.013981
HSPA8 heat shock 70kDa protein 8 0.013965
HOOK2 hook microtubule-tethering protein 2 0.0138398
NUMA1 nuclear mitotic apparatus protein 1 0.0136606
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0135512
SLMAP sarcolemma associated protein 0.0135393
CD164 CD164 molecule, sialomucin 0.0134225
CFDP1 craniofacial development protein 1 0.0133811
HYOU1 hypoxia up-regulated 1 0.0133475
APOLD1 apolipoprotein L domain containing 1 0.0132829
XRN1 5'-3' exoribonuclease 1 0.0132168
RPS18 ribosomal protein S18 0.0131418
ELOVL5 ELOVL fatty acid elongase 5 0.0130671
CAMKMT calmodulin-lysine N-methyltransferase 0.0130577
FNIP1 folliculin interacting protein 1 0.0129931

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.308309
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.19204
VIM vimentin -0.0766598
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.068436
RPL23 ribosomal protein L23 -0.0667876
RPS6 ribosomal protein S6 -0.0601049
TMSB10 thymosin beta 10 -0.0547343
RPL19 ribosomal protein L19 -0.0545213
COL1A1 collagen, type I, alpha 1 -0.0485099
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0462021
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0451623
THSD4 thrombospondin, type I, domain containing 4 -0.0429701
ACTG1 actin gamma 1 -0.0428305
GNAS GNAS complex locus -0.0411384
RPL35A ribosomal protein L35a -0.0396268
CRH corticotropin releasing hormone -0.039549
LSAMP limbic system-associated membrane protein -0.0394787
MEIS2 Meis homeobox 2 -0.0394272
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0392701
RPL37A ribosomal protein L37a -0.038109
TBX2 T-box 2 -0.0374599
RPLP1 ribosomal protein, large, P1 -0.0373805
BPTF bromodomain PHD finger transcription factor -0.0365194
TRIO trio Rho guanine nucleotide exchange factor -0.035647
DCAF7 DDB1 and CUL4 associated factor 7 -0.0324848
PTPRD protein tyrosine phosphatase, receptor type, D -0.0323
NRG1 neuregulin 1 -0.0315146
TPT1 tumor protein, translationally-controlled 1 -0.0310824
PTMA prothymosin, alpha -0.030262
IFI16 interferon, gamma-inducible protein 16 -0.0293846
SYT1 synaptotagmin I -0.029076
KLHL13 kelch-like family member 13 -0.0288372
H3-3B H3.3 histone B -0.028549
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0282689
B2M beta-2-microglobulin -0.0281929
RPL38 ribosomal protein L38 -0.0277751
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0274013
RPL7A ribosomal protein L7a -0.0272808
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0271287
PSD3 pleckstrin and Sec7 domain containing 3 -0.0266284
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0255093
S100A9 S100 calcium binding protein A9 -0.0253596
FNBP1 formin binding protein 1 -0.0253304
RPS24 ribosomal protein S24 -0.0252681
RPS25 ribosomal protein S25 -0.0251218
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0249995
RPL13A ribosomal protein L13a -0.024983
DNM3 dynamin 3 -0.0249303
CALD1 caldesmon 1 -0.0245958
RPL27 ribosomal protein L27 -0.0244841
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0244767
MEF2A myocyte enhancer factor 2A -0.0242104
NRP1 neuropilin 1 -0.0237419
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0232464
MAP1B microtubule-associated protein 1B -0.0230667
ZNF804A zinc finger protein 804A -0.0230166
RPS19 ribosomal protein S19 -0.0228677
GATA3 GATA binding protein 3 -0.0224924
SOX4 SRY (sex determining region Y)-box 4 -0.0223268
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.022216
RPS21 ribosomal protein S21 -0.0215674
PTPRK protein tyrosine phosphatase, receptor type, K -0.0215567
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2 -0.0211061
S100A6 S100 calcium binding protein A6 -0.0210389
RPL34 ribosomal protein L34 -0.0208872
TPI1 triosephosphate isomerase 1 -0.0207477
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0206839
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase -0.0206181
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0205985
RPL37 ribosomal protein L37 -0.020563
RHOBTB3 Rho-related BTB domain containing 3 -0.0201619
RPLP0 ribosomal protein, large, P0 -0.0201464
PRRC2C proline-rich coiled-coil 2C -0.0200486
ZBTB20 zinc finger and BTB domain containing 20 -0.0200392
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0199727
PCDH9 protocadherin 9 -0.019831
EIF4A1 eukaryotic translation initiation factor 4A1 -0.019826
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0197367
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0196705
RPL26 ribosomal protein L26 -0.0196644
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0194598
MX2 MX dynamin-like GTPase 2 -0.019417
SLC16A3 solute carrier family 16 (monocarboxylate transporter), member 3 -0.0192912
SCAF11 SR-related CTD-associated factor 11 -0.0192619
RPS16 ribosomal protein S16 -0.0189321
RPS14 ribosomal protein S14 -0.0186686
NALF1 NALCN channel auxiliary factor 1 -0.0184567
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0184132
RPL28 ribosomal protein L28 -0.0183113
FBXO11 F-box protein 11 -0.0182721
PDZRN3 PDZ domain containing ring finger 3 -0.0182021
SBF2 SET binding factor 2 -0.0179979
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0179954
DNAH14 dynein, axonemal, heavy chain 14 -0.0179935
TAS2R14 taste receptor, type 2, member 14 -0.0179036
IER3 immediate early response 3 -0.0178194
RPLP2 ribosomal protein, large, P2 -0.0177498
RPS29 ribosomal protein S29 -0.0175347
BICD1 bicaudal D homolog 1 (Drosophila) -0.0175112
SCG2 secretogranin II -0.0174684