Bestatin (hydrochloride)_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.115266
ASPH aspartate beta-hydroxylase 0.0944752
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0784746
MCL1 myeloid cell leukemia 1 0.0637368
CANX calnexin 0.0633088
PLEC plectin 0.0606598
CD44 CD44 molecule (Indian blood group) 0.0598872
ENO1 enolase 1, (alpha) 0.05925
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0573153
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0543559
EXT1 exostosin glycosyltransferase 1 0.0454872
MYH9 myosin, heavy chain 9, non-muscle 0.0440346
ERRFI1 ERBB receptor feedback inhibitor 1 0.0422427
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.041669
LDHA lactate dehydrogenase A 0.0410823
VCL vinculin 0.041012
COL6A1 collagen, type VI, alpha 1 0.0398314
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0387564
EGR1 early growth response 1 0.0375792
THBS1 thrombospondin 1 0.0356214
CLIC4 chloride intracellular channel 4 0.0347428
INHBA inhibin, beta A 0.034107
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0331891
CALR calreticulin 0.032882
PKM pyruvate kinase, muscle 0.0318669
COL5A1 collagen, type V, alpha 1 0.031539
IGF1R insulin-like growth factor 1 receptor 0.0311892
AHNAK AHNAK nucleoprotein 0.0305664
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0296125
PDE4D phosphodiesterase 4D, cAMP-specific 0.0292748
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0289798
MACF1 microtubule-actin crosslinking factor 1 0.0283988
ATXN1 ataxin 1 0.0281403
MLPH melanophilin 0.0272096
IL1B interleukin 1, beta 0.0256254
APP amyloid beta (A4) precursor protein 0.0255011
IGF2 insulin-like growth factor 2 0.0250041
CALU calumenin 0.0240353
CDH13 cadherin 13 0.0239212
PCBP3 poly(rC) binding protein 3 0.0237899
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0237572
MSN moesin 0.02323
TENM2 teneurin transmembrane protein 2 0.0231027
GLIS3 GLIS family zinc finger 3 0.0226931
LAMB3 laminin, beta 3 0.0224084
COL6A2 collagen, type VI, alpha 2 0.0222353
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0217797
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0209813
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.020689
LMNA lamin A/C 0.0197554
PTPRF protein tyrosine phosphatase, receptor type, F 0.0197238
VMP1 vacuole membrane protein 1 0.0192356
DST dystonin 0.0188832
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0188029
TNNC1 troponin C type 1 (slow) 0.0187171
TPT1 tumor protein, translationally-controlled 1 0.0183512
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.018197
TPM4 tropomyosin 4 0.0178854
VEGFA vascular endothelial growth factor A 0.0178472
DDIT4 DNA-damage-inducible transcript 4 0.0177516
IGFBP3 insulin-like growth factor binding protein 3 0.0172058
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0171795
STC1 stanniocalcin 1 0.0170734
YBX3 Y box binding protein 3 0.0169616
EMP1 epithelial membrane protein 1 0.0165793
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.0165693
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0165429
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0165208
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0164453
NFE2L1 nuclear factor, erythroid 2-like 1 0.0163237
TM4SF1 transmembrane 4 L six family member 1 0.0162919
RAD21 RAD21 homolog (S. pombe) 0.0162867
PDE10A phosphodiesterase 10A 0.0162161
RAI14 retinoic acid induced 14 0.0161736
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0161195
COL4A2 collagen, type IV, alpha 2 0.015748
APLP2 amyloid beta (A4) precursor-like protein 2 0.0156024
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0155246
PDLIM5 PDZ and LIM domain 5 0.0154649
TGFB1 transforming growth factor, beta 1 0.0153844
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.015038
ALDH1A3 aldehyde dehydrogenase 1 family, member A3 0.014996
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0149851
LOXL2 lysyl oxidase-like 2 0.0149403
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0148591
MPRIP myosin phosphatase Rho interacting protein 0.0148325
SET SET nuclear proto-oncogene 0.0148119
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0147543
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0146644
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0146026
SDC4 syndecan 4 0.0143364
SAR1A secretion associated, Ras related GTPase 1A 0.014335
TXNIP thioredoxin interacting protein 0.0143323
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0143314
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0142032
BZW1 basic leucine zipper and W2 domains 1 0.014192
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0141403
DSCAM Down syndrome cell adhesion molecule 0.0140617
PLAUR plasminogen activator, urokinase receptor 0.0138893
TAC4 tachykinin 4 (hemokinin) 0.0138419

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.304061
MT2A metallothionein 2A -0.103776
TRIO trio Rho guanine nucleotide exchange factor -0.0676078
FNDC3B fibronectin type III domain containing 3B -0.0427874
HMGA2 high mobility group AT-hook 2 -0.0346638
RPS6 ribosomal protein S6 -0.0322157
NDRG1 N-myc downstream regulated 1 -0.032136
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0315256
FAM13A family with sequence similarity 13, member A -0.0293827
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0291201
DTNA dystrobrevin, alpha -0.0286921
TMSB10 thymosin beta 10 -0.0259393
WSB1 WD repeat and SOCS box containing 1 -0.0253284
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0244157
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.024297
RNF145 ring finger protein 145 -0.0239616
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0239406
RPLP1 ribosomal protein, large, P1 -0.0236998
RPS19 ribosomal protein S19 -0.0209022
ANKRD12 ankyrin repeat domain 12 -0.0206021
SPAG9 sperm associated antigen 9 -0.0205102
GOLGA4 golgin A4 -0.0199418
SETD5 SET domain containing 5 -0.0196209
RPL34 ribosomal protein L34 -0.0185943
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0182731
RPLP2 ribosomal protein, large, P2 -0.0180884
MAP1B microtubule-associated protein 1B -0.0178633
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0176385
FTL ferritin, light polypeptide -0.0173235
USP3 ubiquitin specific peptidase 3 -0.0170731
DLG1 discs, large homolog 1 (Drosophila) -0.0170303
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0168579
RPL28 ribosomal protein L28 -0.0166683
ANKRD11 ankyrin repeat domain 11 -0.0163215
MMP12 matrix metallopeptidase 12 -0.0161126
VIM vimentin -0.0158621
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0155858
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0154828
RFX8 RFX family member 8, lacking RFX DNA binding domain -0.0154441
RPS12 ribosomal protein S12 -0.0153022
FOXJ3 forkhead box J3 -0.0151408
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0149857
KMT2E lysine (K)-specific methyltransferase 2E -0.0147677
FTH1 ferritin, heavy polypeptide 1 -0.0147063
CXCL8 chemokine (C-X-C motif) ligand 8 -0.01459
ZNF638 zinc finger protein 638 -0.0144056
PTK2 protein tyrosine kinase 2 -0.014338
RAD51B RAD51 paralog B -0.0142315
RPS8 ribosomal protein S8 -0.0141488
RPL9 ribosomal protein L9 -0.0140508
ZNF292 zinc finger protein 292 -0.0139058
JARID2 jumonji, AT rich interactive domain 2 -0.0135497
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0134704
NIPBL Nipped-B homolog (Drosophila) -0.0130568
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0128914
MATR3 matrin 3 -0.0128791
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0128325
NSD2 nuclear receptor binding SET domain protein 2 -0.0127197
RPL32 ribosomal protein L32 -0.0125034
MT1X metallothionein 1X -0.0123009
ATP13A3 ATPase type 13A3 -0.0122679
QKI QKI, KH domain containing, RNA binding -0.0122386
PUM2 pumilio RNA-binding family member 2 -0.0121736
ESYT2 extended synaptotagmin-like protein 2 -0.0121623
ADM adrenomedullin -0.0121331
RPL23 ribosomal protein L23 -0.0121226
NAV2 neuron navigator 2 -0.0120275
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 -0.0119417
POM121 POM121 transmembrane nucleoporin -0.0118427
ZFAND3 zinc finger, AN1-type domain 3 -0.0117018
MED13L mediator complex subunit 13-like -0.0116197
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0114592
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0113951
RPL11 ribosomal protein L11 -0.0112797
SEC24A SEC24 family member A -0.011073
RPS16 ribosomal protein S16 -0.0109513
MRPS6 mitochondrial ribosomal protein S6 -0.0109381
ZFR zinc finger RNA binding protein -0.0109287
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0109049
ANTXR2 anthrax toxin receptor 2 -0.0108606
RPS20 ribosomal protein S20 -0.0108089
CAMTA1 calmodulin binding transcription activator 1 -0.010491
FNBP1 formin binding protein 1 -0.0104742
ECPAS Ecm29 proteasome adaptor and scaffold -0.0100847
TENT2 terminal nucleotidyltransferase 2 -0.0100824
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0100572
RPS24 ribosomal protein S24 -0.010042
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0100404
RARS1 arginyl-tRNA synthetase 1 -0.00999805
CENPF centromere protein F, 350/400kDa -0.009857
KIF4A kinesin family member 4A -0.00981413
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.00975344
HELZ helicase with zinc finger -0.0095401
RBM25 RNA binding motif protein 25 -0.00951171
RPS29 ribosomal protein S29 -0.00942083
SPIDR scaffolding protein involved in DNA repair -0.00937522
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.00936194
MICU1 mitochondrial calcium uptake 1 -0.0092763
RNF24 ring finger protein 24 -0.00920189
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.00918286