Bestatin (hydrochloride)_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
APOB apolipoprotein B 0.24607
FN1 fibronectin 1 0.135696
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 0.135479
IGFBP1 insulin-like growth factor binding protein 1 0.132411
DSPP dentin sialophosphoprotein 0.119275
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.103088
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0959134
ERRFI1 ERBB receptor feedback inhibitor 1 0.0916284
C3 complement component 3 0.0873111
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0762706
SDC4 syndecan 4 0.073258
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0708014
GPAM glycerol-3-phosphate acyltransferase, mitochondrial 0.0647391
CCL20 chemokine (C-C motif) ligand 20 0.0585182
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0573133
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0553951
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0546636
ABTB3 ankyrin repeat and BTB domain containing 3 0.0503874
PEG3 paternally expressed 3 0.0447663
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0427483
DOCK5 dedicator of cytokinesis 5 0.0415587
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0413615
ITGA1 integrin, alpha 1 0.0389943
PEG10 paternally expressed 10 0.0388676
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0386065
SVIL supervillin 0.038302
SFTPA2 surfactant protein A2 0.037597
PLEC plectin 0.0341634
ARHGAP9 Rho GTPase activating protein 9 0.0339656
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0332768
CFB complement factor B 0.0332196
PABPC1 poly(A) binding protein, cytoplasmic 1 0.033135
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.0326834
SOD2 superoxide dismutase 2, mitochondrial 0.0319408
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.0310084
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0308416
ELL2 elongation factor, RNA polymerase II, 2 0.0302276
LRMDA leucine rich melanocyte differentiation associated 0.0299361
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0297524
EEF2 eukaryotic translation elongation factor 2 0.0293735
MCL1 myeloid cell leukemia 1 0.0286297
RAI14 retinoic acid induced 14 0.0278493
A2M alpha-2-macroglobulin 0.0275783
SFPQ splicing factor proline/glutamine-rich 0.0274565
NKD1 naked cuticle homolog 1 (Drosophila) 0.0274215
STAT1 signal transducer and activator of transcription 1, 91kDa 0.026508
CALR calreticulin 0.0264645
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 0.0262097
PLAC8 placenta-specific 8 0.0261293
LCOR ligand dependent nuclear receptor corepressor 0.0258217
CTNND1 catenin (cadherin-associated protein), delta 1 0.0255959
DNAH17 dynein, axonemal, heavy chain 17 0.0254338
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0249045
FAT1 FAT atypical cadherin 1 0.0245638
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.024436
DHRS3 dehydrogenase/reductase (SDR family) member 3 0.0241989
SOS1 son of sevenless homolog 1 (Drosophila) 0.0240854
ZMIZ1 zinc finger, MIZ-type containing 1 0.0239405
APLP2 amyloid beta (A4) precursor-like protein 2 0.0239037
SMAD3 SMAD family member 3 0.0232733
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0229437
OSBPL10 oxysterol binding protein-like 10 0.0228945
TIMP1 TIMP metallopeptidase inhibitor 1 0.0228552
CANX calnexin 0.0224949
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 0.0224753
BCL2L1 BCL2-like 1 0.0222742
FABP1 fatty acid binding protein 1, liver 0.0221411
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0219694
TRIM26 tripartite motif containing 26 0.0218082
IGF1R insulin-like growth factor 1 receptor 0.0217047
PCBP2 poly(rC) binding protein 2 0.0216551
TF transferrin 0.0215581
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0215283
RRBP1 ribosome binding protein 1 0.0212297
LDHA lactate dehydrogenase A 0.0211368
NCOA7 nuclear receptor coactivator 7 0.0210655
DSCAM Down syndrome cell adhesion molecule 0.0209391
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 0.0209209
MYH9 myosin, heavy chain 9, non-muscle 0.0205722
ACTN4 actinin, alpha 4 0.0205201
HLF hepatic leukemia factor 0.020513
DOCK4 dedicator of cytokinesis 4 0.0205042
MAML2 mastermind-like 2 (Drosophila) 0.0203668
RTN4 reticulon 4 0.0201893
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0199325
WWTR1 WW domain containing transcription regulator 1 0.0196786
UBASH3B ubiquitin associated and SH3 domain containing B 0.0196295
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0195604
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.019441
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 0.0193101
FAM107B family with sequence similarity 107, member B 0.0191968
YAP1 Yes-associated protein 1 0.0191874
ZMYND8 zinc finger, MYND-type containing 8 0.0191341
ACSL4 acyl-CoA synthetase long-chain family member 4 0.0190438
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0185084
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0183067
PRKCSH protein kinase C substrate 80K-H 0.0182777
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0181907
SESTD1 SEC14 and spectrin domains 1 0.0180537
DST dystonin 0.0180496

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.329005
APOA2 apolipoprotein A-II -0.0613867
MT2A metallothionein 2A -0.0453239
RPL37A ribosomal protein L37a -0.0373198
PLIN2 perilipin 2 -0.0365053
RPS24 ribosomal protein S24 -0.0359329
HMGA1 high mobility group AT-hook 1 -0.0326564
TPT1 tumor protein, translationally-controlled 1 -0.0295711
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0295343
RPS8 ribosomal protein S8 -0.0285739
RPL26 ribosomal protein L26 -0.0279934
NDRG1 N-myc downstream regulated 1 -0.0264728
DTNA dystrobrevin, alpha -0.0261196
INSIG2 insulin induced gene 2 -0.0258182
RPS6 ribosomal protein S6 -0.0257355
TMSB10 thymosin beta 10 -0.0242665
PTPRM protein tyrosine phosphatase, receptor type, M -0.02421
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0238435
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0219703
RPL23 ribosomal protein L23 -0.0218475
KDM3A lysine (K)-specific demethylase 3A -0.020938
RPL9 ribosomal protein L9 -0.0208293
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0200014
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0197948
MSI2 musashi RNA-binding protein 2 -0.0196624
RPL12 ribosomal protein L12 -0.0190234
RPL28 ribosomal protein L28 -0.0182773
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 -0.0179534
JMJD1C jumonji domain containing 1C -0.0178029
HELZ helicase with zinc finger -0.0177886
DSTN destrin (actin depolymerizing factor) -0.0177678
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0177056
APOE apolipoprotein E -0.0173661
AKAP12 A kinase (PRKA) anchor protein 12 -0.0172615
WDFY2 WD repeat and FYVE domain containing 2 -0.0172147
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0165871
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0165695
RBM39 RNA binding motif protein 39 -0.0164752
SMAP1 small ArfGAP 1 -0.0164229
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0162706
GMDS GDP-mannose 4,6-dehydratase -0.0161193
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 -0.0160096
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0159894
ZFAND3 zinc finger, AN1-type domain 3 -0.015964
NUMB numb homolog (Drosophila) -0.0159308
GPC3 glypican 3 -0.0158816
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0157929
SRRM1 serine/arginine repetitive matrix 1 -0.0154771
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0154586
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0152361
GRK3 G protein-coupled receptor kinase 3 -0.0151912
RPL35A ribosomal protein L35a -0.0149985
BRWD1 bromodomain and WD repeat domain containing 1 -0.0149653
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0149619
SIK3 SIK family kinase 3 -0.0149479
WDR45B WD repeat domain 45B -0.0148311
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0146943
RPL37 ribosomal protein L37 -0.01467
LMNA lamin A/C -0.0145361
RPL27 ribosomal protein L27 -0.0144229
RPLP2 ribosomal protein, large, P2 -0.0144144
DDIT4 DNA-damage-inducible transcript 4 -0.014377
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.014322
FBXL17 F-box and leucine-rich repeat protein 17 -0.0142334
MARCHF6 membrane associated ring-CH-type finger 6 -0.0142216
RPS14 ribosomal protein S14 -0.014062
RPL34 ribosomal protein L34 -0.0139842
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0139254
RPS25 ribosomal protein S25 -0.013889
CFDP1 craniofacial development protein 1 -0.0138078
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.0137025
RPS19 ribosomal protein S19 -0.0136615
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0136223
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0135262
NR6A1 nuclear receptor subfamily 6, group A, member 1 -0.0134175
TJP1 tight junction protein 1 -0.0132615
RPL36A ribosomal protein L36a -0.013196
RAB6A RAB6A, member RAS oncogene family -0.013002
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein -0.0129358
CHKA choline kinase alpha -0.0128751
NOP58 NOP58 ribonucleoprotein -0.0127801
MAP1B microtubule-associated protein 1B -0.012696
KMT2E lysine (K)-specific methyltransferase 2E -0.0126486
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0125925
ABLIM1 actin binding LIM protein 1 -0.012575
MYO6 myosin VI -0.0125702
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0125085
FAM162A family with sequence similarity 162, member A -0.012481
BMERB1 bMERB domain containing 1 -0.0124251
RPL5 ribosomal protein L5 -0.0123795
NBAS neuroblastoma amplified sequence -0.0122361
S100A6 S100 calcium binding protein A6 -0.0121937
ISG15 ISG15 ubiquitin-like modifier -0.0121431
LMAN1 lectin, mannose-binding, 1 -0.0120106
PSMA1 proteasome (prosome, macropain) subunit, alpha type, 1 -0.0119813
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 -0.0119769
RPS10 ribosomal protein S10 -0.0119728
SBF2 SET binding factor 2 -0.0119533
NGLY1 N-glycanase 1 -0.0119127
RPS27 ribosomal protein S27 -0.0118702