Bestatin (hydrochloride)_LOX-IMVI Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in LOX-IMVI cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_LOX-IMVI drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NUP58 nucleoporin 58 0.0305948
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0290369
FNDC3B fibronectin type III domain containing 3B 0.0255394
WDR43 WD repeat domain 43 0.0233256
SPAG9 sperm associated antigen 9 0.0229319
TXNRD1 thioredoxin reductase 1 0.0226994
KYNU kynureninase 0.0204456
SMAD3 SMAD family member 3 0.0200135
GLS2 glutaminase 2 (liver, mitochondrial) 0.0185867
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa 0.0183887
ATP13A3 ATPase type 13A3 0.0181276
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0171065
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0168979
NCKAP1 NCK-associated protein 1 0.0165177
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0161013
WAC WW domain containing adaptor with coiled-coil 0.0159068
RB1CC1 RB1-inducible coiled-coil 1 0.0151304
ZFAND3 zinc finger, AN1-type domain 3 0.0149808
RPS18 ribosomal protein S18 0.0148582
BCAR3 breast cancer anti-estrogen resistance 3 0.0145578
RBM33 RNA binding motif protein 33 0.0143589
RNF145 ring finger protein 145 0.0142694
SFPQ splicing factor proline/glutamine-rich 0.0142231
RBM39 RNA binding motif protein 39 0.0139804
KMT2E lysine (K)-specific methyltransferase 2E 0.0139172
ECPAS Ecm29 proteasome adaptor and scaffold 0.0138515
PUM2 pumilio RNA-binding family member 2 0.0137877
TSC22D2 TSC22 domain family, member 2 0.0136544
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0132996
ARGLU1 arginine and glutamate rich 1 0.0132447
FUBP1 far upstream element (FUSE) binding protein 1 0.0130311
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 0.0126832
APP amyloid beta (A4) precursor protein 0.0125807
USP15 ubiquitin specific peptidase 15 0.0121592
POU2F1 POU class 2 homeobox 1 0.0121289
HELZ helicase with zinc finger 0.0121039
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0120873
ADAM9 ADAM metallopeptidase domain 9 0.0120662
CD109 CD109 molecule 0.0120235
NUP153 nucleoporin 153kDa 0.011967
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0119614
CYRIB CYFIP related Rac1 interactor B 0.0119421
YTHDC1 YTH domain containing 1 0.0119284
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0118831
ZMYM2 zinc finger, MYM-type 2 0.0118813
STRN3 striatin, calmodulin binding protein 3 0.0118765
CHD1 chromodomain helicase DNA binding protein 1 0.0116937
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0115494
RIGI RNA sensor RIG-I 0.0111961
NBAS neuroblastoma amplified sequence 0.0108442
CHD7 chromodomain helicase DNA binding protein 7 0.0107373
MCTP1 multiple C2 domains, transmembrane 1 0.0106916
PICALM phosphatidylinositol binding clathrin assembly protein 0.0106833
BRD2 bromodomain containing 2 0.0106587
STK17A serine/threonine kinase 17a 0.0105338
PCBP2 poly(rC) binding protein 2 0.0104426
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0102729
UBE3A ubiquitin protein ligase E3A 0.0102152
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0101942
LRPPRC leucine-rich pentatricopeptide repeat containing 0.0100888
SCAF4 SR-related CTD-associated factor 4 0.0100883
MED13L mediator complex subunit 13-like 0.0100442
MYOF myoferlin 0.00975518
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.00972851
GOLGA4 golgin A4 0.00972148
CSPP1 centrosome and spindle pole associated protein 1 0.00970648
CASC3 cancer susceptibility candidate 3 0.00967896
ETNK1 ethanolamine kinase 1 0.0096437
ZNF207 zinc finger protein 207 0.00964031
ITGAV integrin, alpha V 0.00961486
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.00947066
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.00937668
NOP58 NOP58 ribonucleoprotein 0.0092868
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.00926748
PCNX1 pecanex 1 0.00920284
BRWD1 bromodomain and WD repeat domain containing 1 0.00918538
SOD2 superoxide dismutase 2, mitochondrial 0.00916717
ADAM17 ADAM metallopeptidase domain 17 0.00915556
ABI1 abl-interactor 1 0.00904891
SP3 Sp3 transcription factor 0.00904661
KDM6A lysine (K)-specific demethylase 6A 0.00903041
PAWR PRKC, apoptosis, WT1, regulator 0.00899609
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.00893762
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 0.0089175
NEK7 NIMA-related kinase 7 0.00887409
SAMD4A sterile alpha motif domain containing 4A 0.00884036
CCNY cyclin Y 0.00882971
MED13 mediator complex subunit 13 0.00880043
MSN moesin 0.00878007
SCYL2 SCY1-like 2 (S. cerevisiae) 0.00870362
GARS1 glycyl-tRNA synthetase 1 0.00868425
RAD23B RAD23 homolog B (S. cerevisiae) 0.00866548
SCAF8 SR-related CTD-associated factor 8 0.00862959
OLA1 Obg-like ATPase 1 0.00860946
TRIM33 tripartite motif containing 33 0.00860534
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.00857584
SRSF1 serine/arginine-rich splicing factor 1 0.00847934
PRPF4B pre-mRNA processing factor 4B 0.0084192
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0082612
PPHLN1 periphilin 1 0.00825595

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.284015
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.21445
TMSB10 thymosin beta 10 -0.108229
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0960228
PHACTR1 phosphatase and actin regulator 1 -0.0935751
AKAP12 A kinase (PRKA) anchor protein 12 -0.092294
EFNA5 ephrin-A5 -0.0819516
EXT1 exostosin glycosyltransferase 1 -0.0776856
LSAMP limbic system-associated membrane protein -0.0776336
ASPH aspartate beta-hydroxylase -0.07734
PRKG1 protein kinase, cGMP-dependent, type I -0.0755327
SAMD3 sterile alpha motif domain containing 3 -0.0741855
TPT1 tumor protein, translationally-controlled 1 -0.0700696
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.068997
RPS6 ribosomal protein S6 -0.0612501
HMGA2 high mobility group AT-hook 2 -0.0609547
KIAA1217 KIAA1217 -0.0581126
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0532444
ACTG1 actin gamma 1 -0.0529168
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0516422
PTPRG protein tyrosine phosphatase, receptor type, G -0.0511304
KIAA1549L KIAA1549-like -0.0510246
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0495184
CDH13 cadherin 13 -0.0493433
AHNAK AHNAK nucleoprotein -0.048415
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0478422
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0462354
MMP12 matrix metallopeptidase 12 -0.0459416
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0433572
MYO10 myosin X -0.0433456
MAPKAP1 mitogen-activated protein kinase associated protein 1 -0.0428542
TM4SF1 transmembrane 4 L six family member 1 -0.0411354
NAV1 neuron navigator 1 -0.0400635
GPC6 glypican 6 -0.0397787
MT2A metallothionein 2A -0.0395499
SDCCAG8 serologically defined colon cancer antigen 8 -0.0391236
RPS3 ribosomal protein S3 -0.0390295
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0386122
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0371906
EGR1 early growth response 1 -0.036809
TPM4 tropomyosin 4 -0.0361264
ANXA2 annexin A2 -0.0357895
RPL35A ribosomal protein L35a -0.0348324
PBX3 pre-B-cell leukemia homeobox 3 -0.0340645
C2CD2 C2 calcium-dependent domain containing 2 -0.0335616
MACF1 microtubule-actin crosslinking factor 1 -0.0331378
HDAC9 histone deacetylase 9 -0.0327341
PTMA prothymosin, alpha -0.0324484
NDRG1 N-myc downstream regulated 1 -0.0323043
DOCK4 dedicator of cytokinesis 4 -0.0321311
RPLP0 ribosomal protein, large, P0 -0.0317907
RPL23 ribosomal protein L23 -0.0317184
PTPRD protein tyrosine phosphatase, receptor type, D -0.0314474
LDHA lactate dehydrogenase A -0.0312265
RPL12 ribosomal protein L12 -0.0303789
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0300694
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0299905
NAP1L1 nucleosome assembly protein 1-like 1 -0.0296134
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0295568
RPS25 ribosomal protein S25 -0.0287805
RPS8 ribosomal protein S8 -0.0281073
CSTB cystatin B (stefin B) -0.0279042
DSCAM Down syndrome cell adhesion molecule -0.0278189
RPLP1 ribosomal protein, large, P1 -0.027786
CFAP251 cilia and flagella associated protein 251 -0.0276338
DTNA dystrobrevin, alpha -0.0271358
PGK1 phosphoglycerate kinase 1 -0.0271123
SASH1 SAM and SH3 domain containing 1 -0.0263095
RPL37A ribosomal protein L37a -0.0261896
RPS12 ribosomal protein S12 -0.0260637
BTG1 B-cell translocation gene 1, anti-proliferative -0.0259032
LIMCH1 LIM and calponin homology domains 1 -0.0257771
RACK1 receptor for activated C kinase 1 -0.0254651
YBX3 Y box binding protein 3 -0.0253408
RPS19 ribosomal protein S19 -0.0252316
ARHGAP18 Rho GTPase activating protein 18 -0.0244666
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0243984
BZW1 basic leucine zipper and W2 domains 1 -0.0242987
ESM1 endothelial cell-specific molecule 1 -0.023802
FTL ferritin, light polypeptide -0.0237955
CDK14 cyclin-dependent kinase 14 -0.0236897
CTSB cathepsin B -0.0233839
RPS24 ribosomal protein S24 -0.0233377
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0232077
RPS27A ribosomal protein S27a -0.0229149
NABP1 nucleic acid binding protein 1 -0.0227485
JMJD1C jumonji domain containing 1C -0.0225081
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0223174
CALD1 caldesmon 1 -0.022239
RPS13 ribosomal protein S13 -0.0221268
KPNB1 karyopherin (importin) beta 1 -0.021785
RPL30 ribosomal protein L30 -0.0217381
SSH2 slingshot protein phosphatase 2 -0.0217281
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0215419
CDK6 cyclin-dependent kinase 6 -0.0214077
INTS6 integrator complex subunit 6 -0.02117
CAVIN1 caveolae associated protein 1 -0.0211131
ZNF804A zinc finger protein 804A -0.0210926
RPL36 ribosomal protein L36 -0.0205877
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0202389