Bestatin (hydrochloride)_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0860319
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0802362
CANX calnexin 0.0553531
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0518556
LDHA lactate dehydrogenase A 0.051724
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0491763
EREG epiregulin 0.0424615
DSCAM Down syndrome cell adhesion molecule 0.0424566
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0396504
CALR calreticulin 0.0355217
DSPP dentin sialophosphoprotein 0.0346446
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0334447
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.030886
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0299923
DDIT4 DNA-damage-inducible transcript 4 0.0297465
PDIA4 protein disulfide isomerase family A, member 4 0.0262888
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0240973
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0224596
KDM3A lysine (K)-specific demethylase 3A 0.0219268
OGA O-GlcNAcase 0.021022
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.020986
MBNL2 muscleblind-like splicing regulator 2 0.0209041
GARS1 glycyl-tRNA synthetase 1 0.020475
GOLGA4 golgin A4 0.0203968
EEF2 eukaryotic translation elongation factor 2 0.0200294
RPS18 ribosomal protein S18 0.0181847
APP amyloid beta (A4) precursor protein 0.0180519
GDF15 growth differentiation factor 15 0.0180299
EIF4B eukaryotic translation initiation factor 4B 0.0176946
MLEC malectin 0.0175275
ZFAND3 zinc finger, AN1-type domain 3 0.0173909
ERRFI1 ERBB receptor feedback inhibitor 1 0.0173432
FAM13A family with sequence similarity 13, member A 0.0171971
EZR ezrin 0.0168851
RNF43 ring finger protein 43 0.0167016
SCARB2 scavenger receptor class B, member 2 0.016032
EIF1 eukaryotic translation initiation factor 1 0.015995
INSIG1 insulin induced gene 1 0.0158589
RBM39 RNA binding motif protein 39 0.0154861
CD164 CD164 molecule, sialomucin 0.0152431
TM9SF3 transmembrane 9 superfamily member 3 0.0152287
TXNRD1 thioredoxin reductase 1 0.0151514
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.014609
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0145921
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.0145407
EIF4A2 eukaryotic translation initiation factor 4A2 0.0144942
BTBD9 BTB (POZ) domain containing 9 0.0139745
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0139673
MYH9 myosin, heavy chain 9, non-muscle 0.0139436
PSAT1 phosphoserine aminotransferase 1 0.0137448
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0137435
ENO1 enolase 1, (alpha) 0.0136619
ARL15 ADP-ribosylation factor-like 15 0.0135749
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0135487
SET SET nuclear proto-oncogene 0.0135174
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0132675
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0132353
KITLG KIT ligand 0.0130385
SEL1L sel-1 suppressor of lin-12-like (C. elegans) 0.012784
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0126363
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0125489
HDLBP high density lipoprotein binding protein 0.012424
COPB1 coatomer protein complex, subunit beta 1 0.0123466
TMED2 transmembrane emp24 domain trafficking protein 2 0.0122075
GADD45A growth arrest and DNA-damage-inducible, alpha 0.0120574
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0120306
WDR45B WD repeat domain 45B 0.0120113
MKNK2 MAP kinase interacting serine/threonine kinase 2 0.0119753
APLP2 amyloid beta (A4) precursor-like protein 2 0.0119378
PRELID2 PRELI domain containing 2 0.011799
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 0.0116366
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0115341
YBX1 Y box binding protein 1 0.0114787
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0114641
IARS1 isoleucyl-tRNA synthetase 1 0.0114068
MXI1 MAX interactor 1, dimerization protein 0.0112464
RPL3 ribosomal protein L3 0.0111897
SHROOM3 shroom family member 3 0.011092
NAMPT nicotinamide phosphoribosyltransferase 0.0110809
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0110769
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0109218
TMEM59 transmembrane protein 59 0.0108788
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0108236
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0107444
NARS1 asparaginyl-tRNA synthetase 1 0.0107268
SHB Src homology 2 domain containing adaptor protein B 0.0106639
LOC112694756 uncharaterized LOC112694756 0.0106134
RIOK3 RIO kinase 3 0.0105919
KLF3 Kruppel-like factor 3 (basic) 0.0104267
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.010403
CEMIP2 cell migration inducing hyaluronidase 2 0.0103744
FUT3 fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group) 0.0103597
XPOT exportin, tRNA 0.0103371
COPA coatomer protein complex, subunit alpha 0.0102881
EPCAM epithelial cell adhesion molecule 0.0102543
PHF3 PHD finger protein 3 0.0101643
CCDC47 coiled-coil domain containing 47 0.0101561
S100P S100 calcium binding protein P 0.0100977
CARS1 cysteinyl-tRNA synthetase 1 0.0100756
SOX9 SRY (sex determining region Y)-box 9 0.0100249

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.169519
TMSB10 thymosin beta 10 -0.16023
PTMA prothymosin, alpha -0.110561
MUC6 mucin 6, oligomeric mucus/gel-forming -0.103568
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0839391
RPS6 ribosomal protein S6 -0.0827228
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0707446
GREB1L growth regulation by estrogen in breast cancer-like -0.0620173
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0597209
NALF1 NALCN channel auxiliary factor 1 -0.0587017
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0586427
TPT1 tumor protein, translationally-controlled 1 -0.0566819
ANTXR2 anthrax toxin receptor 2 -0.0562103
ACTG1 actin gamma 1 -0.0553895
GMDS GDP-mannose 4,6-dehydratase -0.0543878
ALCAM activated leukocyte cell adhesion molecule -0.053193
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0524735
MYO1E myosin IE -0.0449556
RPL34 ribosomal protein L34 -0.0400962
RPL35A ribosomal protein L35a -0.0397831
CALB1 calbindin 1, 28kDa -0.0379851
S100A6 S100 calcium binding protein A6 -0.0376659
PSD3 pleckstrin and Sec7 domain containing 3 -0.0375948
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0370411
RPS8 ribosomal protein S8 -0.0370141
RNF217 ring finger protein 217 -0.0350483
FLNB filamin B, beta -0.0348187
RPL9 ribosomal protein L9 -0.0344684
TFF1 trefoil factor 1 -0.0336818
SOX4 SRY (sex determining region Y)-box 4 -0.0326421
PTPRK protein tyrosine phosphatase, receptor type, K -0.0322802
SLC35F3 solute carrier family 35, member F3 -0.0299259
POTEF POTE ankyrin domain family, member F -0.0296359
ONECUT3 one cut homeobox 3 -0.0292883
PARD3 par-3 family cell polarity regulator -0.0290654
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0289832
RPS21 ribosomal protein S21 -0.0284187
TFF3 trefoil factor 3 (intestinal) -0.028161
MUC5B mucin 5B, oligomeric mucus/gel-forming -0.0279866
RPS19 ribosomal protein S19 -0.0278214
RPLP2 ribosomal protein, large, P2 -0.0277841
SH3D19 SH3 domain containing 19 -0.0276585
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0275423
RPS25 ribosomal protein S25 -0.0268294
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0261593
SAMD5 sterile alpha motif domain containing 5 -0.0260694
MT2A metallothionein 2A -0.0259451
EGFR epidermal growth factor receptor -0.0258212
RPL37A ribosomal protein L37a -0.0257849
FHIT fragile histidine triad -0.0253069
PDE4D phosphodiesterase 4D, cAMP-specific -0.0250244
HMGA1 high mobility group AT-hook 1 -0.0247521
DIAPH2 diaphanous-related formin 2 -0.0239249
RPL8 ribosomal protein L8 -0.0233447
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0230913
PATJ PATJ crumbs cell polarity complex component -0.0223835
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0222629
LPP LIM domain containing preferred translocation partner in lipoma -0.0220557
MED13 mediator complex subunit 13 -0.0218939
HMGB1 high mobility group box 1 -0.0215335
RPS23 ribosomal protein S23 -0.0213041
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0210394
PTPRR protein tyrosine phosphatase, receptor type, R -0.0209299
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 -0.0208271
CUX1 cut-like homeobox 1 -0.0207658
RPS29 ribosomal protein S29 -0.0206705
SVIL supervillin -0.020649
FRMD5 FERM domain containing 5 -0.020492
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 -0.0204736
JMJD1C jumonji domain containing 1C -0.0202139
RPL23 ribosomal protein L23 -0.0201747
KLK10 kallikrein-related peptidase 10 -0.0201396
TPM4 tropomyosin 4 -0.0199565
RIN2 Ras and Rab interactor 2 -0.0199281
FOXO1 forkhead box O1 -0.0198792
RPS12 ribosomal protein S12 -0.019865
FERMT1 fermitin family member 1 -0.0197966
PRSS3 protease, serine, 3 -0.0196516
F3 coagulation factor III (thromboplastin, tissue factor) -0.0192027
PPARG peroxisome proliferator-activated receptor gamma -0.0190013
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0188604
RPLP1 ribosomal protein, large, P1 -0.0185151
MAML2 mastermind-like 2 (Drosophila) -0.0183177
MUC17 mucin 17, cell surface associated -0.0182324
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0181295
EXT1 exostosin glycosyltransferase 1 -0.0179137
LSAMP limbic system-associated membrane protein -0.0177866
RPS14 ribosomal protein S14 -0.0176635
GTF2IRD1 GTF2I repeat domain containing 1 -0.0174237
PFN1 profilin 1 -0.0173755
CLOCK clock circadian regulator -0.0173632
RPS24 ribosomal protein S24 -0.0172768
RAD51B RAD51 paralog B -0.0172289
RAB10 RAB10, member RAS oncogene family -0.0172153
SMYD3 SET and MYND domain containing 3 -0.0171899
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0166871
DIAPH1 diaphanous-related formin 1 -0.0166604
LAMA4 laminin, alpha 4 -0.0165903
S100A10 S100 calcium binding protein A10 -0.0165712
ABHD2 abhydrolase domain containing 2 -0.0165445