Bestatin (hydrochloride)_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Bestatin (hydrochloride) perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Bestatin (hydrochloride)_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.250205
FTH1 ferritin, heavy polypeptide 1 0.175969
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.166042
PDE4D phosphodiesterase 4D, cAMP-specific 0.164767
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.139546
PM20D1 peptidase M20 domain containing 1 0.132486
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.12433
PABPC1 poly(A) binding protein, cytoplasmic 1 0.113709
THSD4 thrombospondin, type I, domain containing 4 0.112231
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0950153
TXNRD1 thioredoxin reductase 1 0.0898782
GRAMD1B GRAM domain containing 1B 0.0861523
VIM vimentin 0.0811489
DOCK4 dedicator of cytokinesis 4 0.0694965
MCL1 myeloid cell leukemia 1 0.0678357
KYNU kynureninase 0.0638558
FTL ferritin, light polypeptide 0.0615702
POTEF POTE ankyrin domain family, member F 0.0589475
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0586907
FNDC3B fibronectin type III domain containing 3B 0.056951
ZFAND3 zinc finger, AN1-type domain 3 0.0563457
LDHA lactate dehydrogenase A 0.0556069
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0555044
NRG1 neuregulin 1 0.0540188
EGR1 early growth response 1 0.0529436
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0520738
CCNL1 cyclin L1 0.0514408
RPLP0 ribosomal protein, large, P0 0.051216
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0507266
HMGA1 high mobility group AT-hook 1 0.0501062
PCBP2 poly(rC) binding protein 2 0.0500675
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0500204
GLIS3 GLIS family zinc finger 3 0.0489628
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0473617
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0465787
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0465105
BASP1 brain abundant, membrane attached signal protein 1 0.045519
TFG TRK-fused gene 0.0453645
COPA coatomer protein complex, subunit alpha 0.0447154
ASPH aspartate beta-hydroxylase 0.0444299
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0442994
EFNA5 ephrin-A5 0.0441632
TMEM131 transmembrane protein 131 0.0437765
DST dystonin 0.0431118
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0429011
OSMR oncostatin M receptor 0.0410643
ANKRD28 ankyrin repeat domain 28 0.0402339
PTK2 protein tyrosine kinase 2 0.0397114
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0391412
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0389701
FAM107B family with sequence similarity 107, member B 0.0384449
PKM pyruvate kinase, muscle 0.0378336
TPM4 tropomyosin 4 0.0375414
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0371786
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0363295
EEF2 eukaryotic translation elongation factor 2 0.0358133
ZNF207 zinc finger protein 207 0.0357676
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0354129
PFN1 profilin 1 0.035098
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0344813
CXCL8 chemokine (C-X-C motif) ligand 8 0.0344704
VDAC1 voltage-dependent anion channel 1 0.0344582
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0344351
USP3 ubiquitin specific peptidase 3 0.0341686
BIRC6 baculoviral IAP repeat containing 6 0.0337451
ANKRD11 ankyrin repeat domain 11 0.033669
TNPO1 transportin 1 0.0328472
SOD2 superoxide dismutase 2, mitochondrial 0.0326994
MBNL1 muscleblind-like splicing regulator 1 0.032592
NEGR1 neuronal growth regulator 1 0.0324265
YBX1 Y box binding protein 1 0.0320838
MAML3 mastermind-like 3 (Drosophila) 0.0318171
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0317861
TTC28 tetratricopeptide repeat domain 28 0.0312647
WWOX WW domain containing oxidoreductase 0.0306836
ITGAV integrin, alpha V 0.0305677
PLS3 plastin 3 0.0302879
RAD51B RAD51 paralog B 0.0302474
MACF1 microtubule-actin crosslinking factor 1 0.0301768
ARHGAP12 Rho GTPase activating protein 12 0.0299094
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.029557
UTRN utrophin 0.0291768
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.029152
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0290083
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 0.028954
AK1 adenylate kinase 1 0.0289456
NTN4 netrin 4 0.0289217
PDE8A phosphodiesterase 8A 0.0286162
OAZ1 ornithine decarboxylase antizyme 1 0.0281076
MYOF myoferlin 0.0273278
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.026782
FXR1 fragile X mental retardation, autosomal homolog 1 0.026557
WBP11 WW domain binding protein 11 0.0264214
CMIP c-Maf inducing protein 0.0259501
PDIA6 protein disulfide isomerase family A, member 6 0.0257865
S100A10 S100 calcium binding protein A10 0.0256382
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0255661
FTO fat mass and obesity associated 0.0254107
SDC4 syndecan 4 0.0250494
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0247613

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.100868
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.096739
MT2A metallothionein 2A -0.0903911
TM4SF1 transmembrane 4 L six family member 1 -0.0831684
RPS2 ribosomal protein S2 -0.0808022
HSPA8 heat shock 70kDa protein 8 -0.0654583
ERRFI1 ERBB receptor feedback inhibitor 1 -0.051854
EIF1 eukaryotic translation initiation factor 1 -0.0406666
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.04053
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0402773
CAVIN1 caveolae associated protein 1 -0.0336004
RPS8 ribosomal protein S8 -0.0325385
AKAP12 A kinase (PRKA) anchor protein 12 -0.0322312
MKI67 marker of proliferation Ki-67 -0.0320879
KTN1 kinectin 1 (kinesin receptor) -0.031383
RBM39 RNA binding motif protein 39 -0.0307647
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0300282
KDM3A lysine (K)-specific demethylase 3A -0.0299917
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0298567
CLTC clathrin, heavy chain (Hc) -0.0294039
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 -0.0292502
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0284537
RPL19 ribosomal protein L19 -0.0274501
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0274082
TFPI2 tissue factor pathway inhibitor 2 -0.0262664
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.026241
RPL4 ribosomal protein L4 -0.0260672
MIS18BP1 MIS18 binding protein 1 -0.0258013
TPD52 tumor protein D52 -0.0256461
ANXA1 annexin A1 -0.0252445
RPL7 ribosomal protein L7 -0.0251373
NUSAP1 nucleolar and spindle associated protein 1 -0.0251174
GOLT1B golgi transport 1B -0.0243717
GOLGA4 golgin A4 -0.0236427
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0234319
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0233001
MBTPS1 membrane-bound transcription factor peptidase, site 1 -0.022628
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0224325
GOLGB1 golgin B1 -0.0221345
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.022132
RSRC2 arginine/serine-rich coiled-coil 2 -0.0215818
STC1 stanniocalcin 1 -0.0215422
RPL3 ribosomal protein L3 -0.0215316
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0215052
BRD2 bromodomain containing 2 -0.0214609
H1-4 H1.4 linker histone, cluster member -0.0212867
CYTH1 cytohesin 1 -0.0208978
STK4 serine/threonine kinase 4 -0.0208856
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0205358
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0202247
MAPK8 mitogen-activated protein kinase 8 -0.0198488
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2 -0.0195691
RPS3 ribosomal protein S3 -0.0194049
SRRM1 serine/arginine repetitive matrix 1 -0.0188498
RPL6 ribosomal protein L6 -0.0185685
PUM2 pumilio RNA-binding family member 2 -0.0184117
TPT1 tumor protein, translationally-controlled 1 -0.018372
RPS27A ribosomal protein S27a -0.0183053
ARHGAP29 Rho GTPase activating protein 29 -0.0178366
GON4L gon-4-like (C. elegans) -0.0175654
RFWD3 ring finger and WD repeat domain 3 -0.0172831
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0172592
DDX46 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 -0.0171531
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -0.0171315
PRPF3 pre-mRNA processing factor 3 -0.017051
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0170325
RPL23 ribosomal protein L23 -0.0167658
THOC2 THO complex 2 -0.0167482
NOB1 NIN1/RPN12 binding protein 1 homolog (S. cerevisiae) -0.0167039
SERF2 small EDRK-rich factor 2 -0.0166355
RPL9 ribosomal protein L9 -0.016619
TASOR2 transcription activation suppressor family member 2 -0.0166155
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 -0.0166116
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0165936
TRIM37 tripartite motif containing 37 -0.0165569
RECQL RecQ helicase-like -0.016524
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 -0.0164775
RPL26 ribosomal protein L26 -0.0164158
EIF3E eukaryotic translation initiation factor 3, subunit E -0.0162572
TMSB10 thymosin beta 10 -0.0162563
CENPE centromere protein E, 312kDa -0.0160168
MORF4L2 mortality factor 4 like 2 -0.0160144
EIF3B eukaryotic translation initiation factor 3, subunit B -0.0159957
EP400 E1A binding protein p400 -0.0158404
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0158305
ADAR adenosine deaminase, RNA-specific -0.0158146
MED6 mediator complex subunit 6 -0.0158093
CENPF centromere protein F, 350/400kDa -0.015719
PHF20 PHD finger protein 20 -0.015678
RPL34 ribosomal protein L34 -0.0156619
PPP4R3A protein phosphatase 4 regulatory subunit 3A -0.0156427
FCHO2 FCH domain only 2 -0.0156139
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.015475
S100A6 S100 calcium binding protein A6 -0.015423
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.015363
OSBP oxysterol binding protein -0.015353
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0153301
PRC1 protein regulator of cytokinesis 1 -0.0153246
PDCD11 programmed cell death 11 -0.015285
NCEH1 neutral cholesterol ester hydrolase 1 -0.0152759